FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_NEIMB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup B GN=gatA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.577e-14 Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 3 Query: 312 ARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 ++Q+ EL+S + K A+ +T +T L A+ DE + L G+P++ KD F G ++ + + + + + +V+ LL+ G V +TN+ + M ++N+ +G NP N GGSSGG A+VA + +P +G+D GSIR P+ CG G +PT Sbjct: 15 SKQISAVELASAYLAAIAEKNPALNGYITIDQDKT-----LAEARAADERIAQGN--ASALTGVPVAYKDIFCQTGWRSACAS-KMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPT 191
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_FRATO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=gatA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.577e-14 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 ++ +L +GE+S++ +T + + + + + ++AL+ A+ D + GK G L G+PI KD F KG +TTA + + + A +S + + + G V K N+ + M ++ + +G NP + GGSSGG A VA +P+ G+D GS+R P+ CG +P+ Sbjct: 6 KLRARLDSGEISAVELTKEYLAKIKEQDKRINSIITLCEAEALKEAEDADAIISA-GKQ-GLLTGIPILHKDLFCTKGIRTTAAS-KMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFAMGSTNEYSYYGAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPS 189
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_FRATH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. holarctica (strain LVS) GN=gatA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.577e-14 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 ++ +L +GE+S++ +T + + + + + ++AL+ A+ D + GK G L G+PI KD F KG +TTA + + + A +S + + + G V K N+ + M ++ + +G NP + GGSSGG A VA +P+ G+D GS+R P+ CG +P+ Sbjct: 6 KLRARLDSGEISAVELTKEYLAKIKEQDKRINSIITLCEAEALKEAEDADAIISA-GKQ-GLLTGIPILHKDLFCTKGIRTTAAS-KMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFAMGSTNEYSYYGAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPS 189
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_FRATF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=gatA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.577e-14 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 ++ +L +GE+S++ +T + + + + + ++AL+ A+ D + GK G L G+PI KD F KG +TTA + + + A +S + + + G V K N+ + M ++ + +G NP + GGSSGG A VA +P+ G+D GS+R P+ CG +P+ Sbjct: 6 KLRARLDSGEISAVELTKEYLAKIKEQDKRINSIITLCEAEALKEAEDADAIISA-GKQ-GLLTGIPILHKDLFCTKGIRTTAAS-KMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFAMGSTNEYSYYGAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPS 189
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_DESAP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulforudis audaxviator (strain MP104C) GN=gatA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.577e-14 Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 429 ALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 AL +A +D L+ +G+ + PL G+P +IKD ++G T + + + ++ +VE L + VI KTN+ + M ++++ F T NP + GGSSGG A VA + +G+D GSIR P+ CG G +PT Sbjct: 51 ALRQAAAVDRELQ-NGRELPPLAGIPFAIKDNICLRGLPATCSS-KILHNWVPPYDATVVEKLKDQQTVILGKTNMDEFAMGSSTEHSAFFTTRNPWDPKRVPGGSSGGSAAAVAAGSAICALGSDTGGSIRQPASFCGVVGMKPT 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BACWK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus weihenstephanensis (strain KBAB4) GN=gatA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.577e-14 Identity = 57/195 (29.23%), Postives = 89/195 (45.64%), Query Frame = 3 Query: 294 NSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +S +E+ ++L E+S + KR + + A +AK LD ++ + G L G+PI +KD G +TT + + + ++ +V+ L V K N+ + M ++N+ F T NP N GGSSGG A VA +G+D GSIR P+ CG G +PT RV Sbjct: 6 HSVSELHKKLNNKEISVTDLVEESYKRISDVEDNVKAFLTLDEENARAKAKELDA--KIGAEDNGLLFGMPIGVKDNIVTNGLRTTCAS-KILANFDPIYDATVVQKLKAADTVTIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PSEA7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa (strain PA7) GN=gatA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.284e-14 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVT-TAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 EIAR L S+ +T T + + QL S ++ T A+ +AK DE +G+ G L G PI+ KD F +G +T+ G + + + + ++ +VE L G V K N+ + M + ++ +G NP + GGSSGG A VA + P GTD GSIR P+ G +PT RV Sbjct: 9 EIARALADKRFSAEELTRTLLGRIRQLDPQLNSFISVTD-DLAIAQAKAADER-RANGEN-GALLGAPIAHKDLFCTQGVRTSCGS-KMLDNFVSPYDATVVEKLAAAGTVTLGKLNMDEFAMGSSNQSSHYGAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRV 196
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_FRATW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=gatA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.284e-14 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 ++ +L +GE+S++ +T + + + + + ++AL+ A+ D + GK G L G+PI KD F KG +TTA + + + A +S + + + G V K N+ + M ++ + +G NP + GGSSGG A VA +P+ G+D GS+R P+ CG +P+ Sbjct: 6 KLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISA-GKQ-GLLTGIPILHKDLFCTKGIRTTAAS-KMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFAMGSTNEYSYYGAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPS 189
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_FRATT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. tularensis GN=gatA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.284e-14 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 ++ +L +GE+S++ +T + + + + + ++AL+ A+ D + GK G L G+PI KD F KG +TTA + + + A +S + + + G V K N+ + M ++ + +G NP + GGSSGG A VA +P+ G+D GS+R P+ CG +P+ Sbjct: 6 KLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISA-GKQ-GLLTGIPILHKDLFCTKGIRTTAAS-KMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFAMGSTNEYSYYGAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPS 189
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_FRATM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=gatA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.284e-14 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 ++ +L +GE+S++ +T + + + + + ++AL+ A+ D + GK G L G+PI KD F KG +TTA + + + A +S + + + G V K N+ + M ++ + +G NP + GGSSGG A VA +P+ G+D GS+R P+ CG +P+ Sbjct: 6 KLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISA-GKQ-GLLTGIPILHKDLFCTKGIRTTAAS-KMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFAMGSTNEYSYYGAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPS 189 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |