FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_STRSV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus sanguinis (strain SK36) GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 56/190 (29.47%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 309 IARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 + +++ EL+ + + AA+ +T E + A AK +D + G+P+++KD KG TTA + + + ++ VE L +I KTN+ + M G S+N+ F T N ++S GGSSGG VA L +G+D GSIR P+ G G +PT RV Sbjct: 16 VKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKGIDAD--------NLMSGIPLAVKDNISTKGILTTAAS-KILYNYKPIFDATSVEKLYGKDMIIVGKTNMDEFAMGGSSENSYFKTTKNAWDSSKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPASFNGVVGLKPTYGRV 196
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_METTH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanobacterium thermoautotrophicum GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 363 FAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 F KR + E +A++RA+ +D + GK G L GL I +K V+ +A + +++ + ++ ++ + E +I TN+ + ++ + FG T NP GGSSGG A VA L +G+D GSIR P+ CG GF+PT Sbjct: 27 FLKRIEAKNDDINAFLEVRGEEAIKRAEEIDARIA-SGKETGKLAGLVIGVKSNINVEDFNVSAAS-KTLENYTGSYDATVIRRIKEEDGIIIGMTNMDEFAAGSSTETSFFGPTDNPAAPGRIPGGSSGGSAAAVAAGMCDLALGSDTGGSIRNPASHCGVMGFKPT 192
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_HELPJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter pylori J99 GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 438 RAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 RA L+ Y++ G+PI IKD VKG + T + ++ A ++ +E L + G + +N+ + M ++++ +G T NP + ++ GGSSGG A VA + +G+D GSIR P+ CG G +PT RV Sbjct: 27 RASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITCSS-KILEGYVAPYHASAIENLHQNGMAGFGLSNMDEFAMGSTTESSCYGITKNPRDKNIVPGGSSGGSAAAVAGGLTVAALGSDTGGSIRQPASYCGCVGLKPTYGRV 172
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CAMJR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter jejuni (strain RM1221) GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 47/145 (32.41%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 444 KYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 ++LD+ L + G+ G+P++IKD VKG + T+ + A + S +V + G + + N+ + M + ++ +G+TLNP N GGSSGG A VA + +G+D GS+R P+ CG GF+P+ RV Sbjct: 38 QFLDKDLSVSGE------GVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKAN-GFSPFGRCNMDEFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRV 175
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CAMJ8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 47/145 (32.41%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 444 KYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 ++LD+ L + G+ G+P++IKD VKG + T+ + A + S +V + G + + N+ + M + ++ +G+TLNP N GGSSGG A VA + +G+D GS+R P+ CG GF+P+ RV Sbjct: 38 QFLDKDLSVSGE------GVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKAN-GFSPFGRCNMDEFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRV 175
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_AERPE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Aeropyrum pernix GN=gatA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 3 Query: 492 LHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 L G+ + +KD TTAG + N+ +VE LL GA+I KTN+ + M + + FG T NP + S GGSS G GA +A+ +G+D GS+R+P+ T G +PT Sbjct: 70 LEGVVVGVKDNISTSFLPTTAGS-RMLDGYIPPFNATVVERLLMEGAIIIGKTNLDEFAMGSTGEFSAFGPTRNPWDLSRVPGGSSSGSGACLAYGACDAALGSDTGGSVRLPAAYTATVGLKPT 193
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: AMIA2_MYCTU (Putative amidase amiA2 OS=Mycobacterium tuberculosis GN=amiA2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 59/192 (30.73%), Postives = 86/192 (44.79%), Query Frame = 3 Query: 303 TEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 T++ QL T ++S + + ++Q + + AL A D+ PL G+PI++KD V G T G ++ AT++ +V L GAVI KTN + + FG T NP + T GGSSGG A VA +G+D AGSIRIP+ G +P R+ Sbjct: 24 TDLLYQLATRAVTSEELVRRSLRAIDVSQPTLNAFRVVLTESALADAAAADK--RRAAGDTAPLLGIPIAVKDDVDVAGVPTAFGTQGYVA--PATDDCEVVRRLKAAGAVIVGKTNTCELGQWPFTSGPGFGHTRNPWSRRHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSIRIPAAWTHLVGIKPQRGRI 211
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: AMIA2_MYCBO (Putative amidase amiA2 OS=Mycobacterium bovis GN=amiA2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 59/192 (30.73%), Postives = 86/192 (44.79%), Query Frame = 3 Query: 303 TEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 T++ QL T ++S + + ++Q + + AL A D+ PL G+PI++KD V G T G ++ AT++ +V L GAVI KTN + + FG T NP + T GGSSGG A VA +G+D AGSIRIP+ G +P R+ Sbjct: 24 TDLLYQLATRAVTSEELVRRSLRAIDVSQPTLNAFRVVLTESALADAAAADK--RRAAGDTAPLLGIPIAVKDDVDVAGVPTAFGTQGYVA--PATDDCEVVRRLKAAGAVIVGKTNTCELGQWPFTSGPGFGHTRNPWSRRHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSIRIPAAWTHLVGIKPQRGRI 211
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: HYIN_RHIRD (Indoleacetamide hydrolase OS=Rhizobium radiobacter GN=tms2 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13 Identity = 60/195 (30.77%), Postives = 81/195 (41.54%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRVP 881 S + LK + S L + R A+ L + L T + AK +D HG L G+P+ K T+A I H S + E L GA+ N+ + S+N G NP N L GGSSGG A VA + G+GTD S+R+P+ CG GF+PT R P Sbjct: 6 SLAQSLEHLKRKDYSCLELVETLIARCEAAKSLNALLA-TDWDGLRRSAKKIDR----HGNAGVGLCGIPLCFKANIATGVFPTSAATPALINHLPKIP-SRVAERLFSAGALPGASGNMHELSFGITSNNYATGAVRNPWNPDLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRLPAALCGVVGFRPTLGRYP 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: HYIN_AGRT9 (Indoleacetamide hydrolase OS=Agrobacterium tumefaciens (strain 15955) GN=tms2 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13 Identity = 60/195 (30.77%), Postives = 81/195 (41.54%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRVP 881 S + LK + S L + R A+ L + L T + AK +D HG L G+P+ K T+A I H S + E L GA+ N+ + S+N G NP N L GGSSGG A VA + G+GTD S+R+P+ CG GF+PT R P Sbjct: 6 SLAQSLEHLKRKDYSCLELVETLIARCEAAKSLNALLA-TDWDGLRRSAKKIDR----HGNAGVGLCGIPLCFKANIATGVFPTSAATPALINHLPKIP-SRVAERLFSAGALPGASGNMHELSFGITSNNYATGAVRNPWNPDLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRLPAALCGVVGFRPTLGRYP 194 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |