FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CHLPN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia pneumoniae GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20 Identity = 63/190 (33.16%), Postives = 100/190 (52.63%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA E+A+ + GEL++ VT F R A+ QALE+A+ +D+ G+P+G L G+P+ IKD V G +TT +++ ++ +VE + + +I K N+ + M + + F T NP + S GGSSGG A V+ + P+ +G+D GSIR P+ CG GF+P+ Sbjct: 5 SALELAKAVTLGELTATGVTQHFFHRIEEAEGQVGAFISLCKEQALEQAELIDKKRS-RGEPLGKLAGVPVGIKDNIHVTGLKTTCAS-RVLENYQPPFDATVVERIKKEDGIILGKLNMDEFAMGSTTLYSAFHPTHNPWDLSRVPGGSSGGSAAAVSARFCPVALGSDTGGSIRQPAAFCGVVGFKPS 192
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20 Identity = 69/194 (35.57%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D L GPL GLPI+ KD F +G ++TAG + + + A+ ++ +V L G V KTN+ + M ++N+ FG NP +TS GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNA-FVHVDAELTLAQAKAADAALA--NGEAGPLAGLPIAHKDVFVTRGWRSTAGS-KMLANYASPFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURP1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei (strain 1710b) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20 Identity = 69/194 (35.57%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D L GPL GLPI+ KD F +G ++TAG + + + A+ ++ +V L G V KTN+ + M ++N+ FG NP +TS GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNA-FVHVDAELTLAQAKAADAALA--NGEAGPLAGLPIAHKDVFVTRGWRSTAGS-KMLANYASPFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURP0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei (strain 1106a) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20 Identity = 69/194 (35.57%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D L GPL GLPI+ KD F +G ++TAG + + + A+ ++ +V L G V KTN+ + M ++N+ FG NP +TS GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNA-FVHVDAELTLAQAKAADAALA--NGEAGPLAGLPIAHKDVFVTRGWRSTAGS-KMLANYASPFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: HYIN1_BRAJA (Indoleacetamide hydrolase OS=Bradyrhizobium japonicum GN=bam PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20 Identity = 62/195 (31.79%), Postives = 99/195 (50.77%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRVP 881 SA + A +++G +S++ A R + + + +AL+ A D+ G +G LHG+PI+IK+ +G+ G V K A ++ +V L + GA++ TN P+ G +DN + G TLNP + +T GGSSGG G+ VA + G D+ GS+R P+ C G +PT R+P Sbjct: 61 SAVDTAAAIRSGAISAVETVEAHLDRMRAVNPRLNAVVVDLSKEALKAAHAADKQ-RAKGGELGLLHGVPITIKENVDYEGRPNFNG-VPANKDYIAPSDAPVVRNLKKAGAIVIGLTNTPEFSFRGFTDNPLHGLTLNPWDPDITCGGSSGGAGSAVAAGIGTIAHGNDIGGSLRWPAHCNGVATIKPTQGRIP 253
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_THEPX (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter sp. (strain X514) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 E+ LK E+S+L VT ++ +R + L AL++AK DE ++ G+ L G+P+ IKD +G +TT + +++ N+ +VE LLE G +I K+N+ + M ++N+ F T NP + S GGSSGG A +A + +G+D GSIR P+ CG G +PT Sbjct: 10 ELRELLKKREVSALEVTKSYLERIKEVEPKIDALVTITEDFALQKAKEADEKIK-KGEDTA-LTGIPVIIKDNISTEGIKTTCSS-KMLENYIPPYNATVVEKLLEEGVIILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAIAADEAAFALGSDTGGSIRQPASLCGVVGMKPT 193
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_DESAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20 Identity = 68/194 (35.05%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TEI L T E+++ A ++ A ++ T L +AL++A+ +D KP L G+P+ IKD G TTAG + ++ +S V L E GA+I K N+ + M ++N+ + T NP + S GGSSGG GA VA +GTD GSIR+P+ CG G +PT RV Sbjct: 8 SLTEIHAMLMTKEVTATEAVKACLEQIAKSEPETKALLHICNDEALKQAEEMDAAGPDASKP---LWGVPVVIKDALATNGIPTTAGS-KILEGFTPFYDSTAVAKLKEAGAIIVGKANMDEFAMGSTTENSAYQTTTNPWDASRVPGGSSGGSGATVAAGQCYAALGTDTGGSIRLPASFCGCVGVKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CARHZ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20 Identity = 66/191 (34.55%), Postives = 105/191 (54.97%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTA-FAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA EI ++K E+S++ V A F + A+ ++ + +T T L+ A+ +DE + G+ GPL G+P++IKD G +TT + +++ ++ +VE L E GAV KTN+ + M ++N+ F T NP + GGSSGG A VA + + +G+D GSIR P+ CG G +PT Sbjct: 7 SAKEITEKIKAKEISAVEVAKATFDRIEAVEPKIQAYVTVTR-ELGLKMAREVDEKIA-RGEDPGPLAGVPVAIKDNMSTAGIRTTCSS-KILENYIPPYDATVVEKLKEAGAVFTGKTNLDEFAMGSSTENSRFFPTRNPWDLERVPGGSSGGSAASVAAGEAVVALGSDTGGSIRQPAAFCGIVGLKPT 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PROMM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9313) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.053e-20 Identity = 66/191 (34.55%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E +QLK GE+S+ +T R A+ + +A A +DE L G+ + PL G+P++IKD KG +TT ++ S + E L + GAV+ KTN+ + M ++ + FG T NP + S GGSSGG A VA +G+D GSIR P+ CG G +PT RV Sbjct: 5 EWRQQLKLGEVSARELTDHQLARIAVVDPTLHAFLDITADRARADADRIDEALAA-GESLPPLAGVPLAIKDNLCTKGIRTTCSS-RMLETFVPPYESTVTERLWQAGAVLLGKTNLDEFAMGSSTETSAFGATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYGRV 193
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CHLAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.053e-20 Identity = 66/186 (35.48%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 321 LKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 L GEL+++ +T A R + AL A+ DE G+ + PL G+PI IKD G TTAG + N+ ++E LL G V+ K N + M ++N+ + T NP +TS GGSSGG A VA P +GTD GSIR P+ CG G +PT RV Sbjct: 16 LAAGELTAVELTEACLARINATEPQIRAFLHLTPEAALAAARAADERRR-RGQALSPLDGIPIGIKDVICTNGVPTTAGS-RILAGFRPPYNATVIERLLAAGTVLIGKLNCDEFAMGSSTENSAYQITTNPWDTSRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRV 199 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |