FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_METBU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcoides burtonii (strain DSM 6242) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.208e-20 Identity = 56/146 (38.36%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 429 ALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 AL+ AK +D+ G+ GPL G+PI+IKD KG TT + ++ ++ ++E L E GAVI KTN+ + M ++++ +G TLNP + GGSSGG A+VA +P+ +G+D GS+R P+ CG G +PT Sbjct: 45 ALDTAKMVDK-----GEVAGPLAGVPIAIKDNISTKGLATTCSS-KILEGYVPPYDAHVIERLKEAGAVIIGKTNMDEFAMGTSTESSCYGVTLNPWDHERVPGGSSGGSAAVVAAGEAPISLGSDTGGSVRCPAAFCGVVGLKPT 184
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURXL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia xenovorans (strain LB400) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.208e-20 Identity = 68/194 (35.05%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A L + + + L +AK D L H GPL GLPI+ KD F KG ++TAG + + + + ++ +V L G V KTN+ + M ++N+ FG NP + GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALTARECSAVELAQLYLKRIEAANSLNAFI-QVDPDLTLAQAKAADALL--HTGHAGPLVGLPIAHKDVFVTKGWRSTAGS-KMLSNYESPFDATVVARLQNAGMVCVGKTNMDEFAMGSSNENSYFGPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPASFSGITGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURP6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei (strain 668) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.208e-20 Identity = 69/194 (35.57%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D L GPL GLPI+ KD F +G ++TAG + + + A+ ++ +V L G V KTN+ + M ++N+ FG NP +TS GGSSGG A VA +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNA-FVHVDAELTLAQAKAADAALA--NGEAGPLAGLPIAHKDVFVTRGWRSTAGS-KMLANYASPFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAAGLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_METAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina acetivorans GN=gatA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20 Identity = 58/151 (38.41%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 414 TMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T+ +ALE+AK +D +E H GPL G+PI+IKD V G + G + ++ N+ ++E LL+ GAVI KTN+ + M ++ + +G T NP + GGSSGG A+VA +P +G+D GS+R P+ CG G +PT Sbjct: 41 TVSDKALEQAKKID--VEGHE---GPLAGVPIAIKDNISVVGLPNSCGS-KILEGYVPPFNAHVIEKLLDAGAVILGKTNLDEFAMGSSTETSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPT 185
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_DEIDV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gatA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20 Identity = 65/196 (33.16%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSC--LTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +AT +AR + GE + A+ RA A L + L E +QA E ++ L G PL G+P+ +KD V G +TT G + + + + L++ GAVI K N+ + M ++++ G TLNP + S GGSSGG VA +P+ +G+D GS+R P+ G YG +PT RV Sbjct: 6 TATALARAVTAGETTPQALLDQAVARAEAASTLNALVSLNEQAGAQAAEVSR------RLAGGEALPLAGVPVIVKDNINVSGTRTTCGS-RILATYVSPYTATAAQRLIDAGAVIVGKANMDEFAMGSSTESSASGPTLNPWDLSRVPGGSSGGSAVAVAANLTPVSLGSDTGGSVRQPAALTGVYGLKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gatA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20 Identity = 68/194 (35.05%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D L GPL GLPI+ KD F +G ++TAG + + + A+ ++ +V L G V KTN+ + M ++N+ FG NP +T+ GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNA-FVHVDAELTLAQAKAADAALAKG--EAGPLAGLPIAHKDVFVTRGWRSTAGS-KMLANYASPFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURPP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gatA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20 Identity = 68/194 (35.05%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A L + + + L +AK D L H GPL GLPI+ KD F KG ++TAG + + + + ++ +V L G V KTN+ + M ++N+ FG NP + GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALTAKECSAVELAQLYLKRIDAANSLNAFI-QVDPDLTLAQAKAADALL--HTGHAGPLVGLPIAHKDVFVTKGWRSTAGS-KMLSNYESPFDATVVARLQNAGMVCVGKTNMDEFAMGSSNENSYFGPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPASFSGITGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_TROWT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Tropheryma whipplei (strain Twist) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 62/189 (32.80%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 A +A +++ E+S+L V +F + T FS + A+ +DE L+ K + PL G+PI++KD + TTAG + ++ N+ ++E + I KTN + M ++ + + T NP + S TAGGS GG A V+ +PL +GTD GSIR+P+ C GT G +PT Sbjct: 38 AHRLAALIRSKEVSALEVAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEELKSATK-LSPLAGVPIAVKDMILTRDMPTTAGS-KILEGWIPPYNATVIERISRARMPILGKTNQDEFGMGSSTEYSAYKTTRNPWDLSRTAGGSGGGSSAAVSASQAPLALGTDTGGSIRLPAHCTGTVGIRPT 224
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_TROW8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Tropheryma whipplei (strain TW08/27) GN=gatA PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 62/189 (32.80%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 A +A +++ E+S+L V +F + T FS + A+ +DE L+ K + PL G+PI++KD + TTAG + ++ N+ ++E + I KTN + M ++ + + T NP + S TAGGS GG A V+ +PL +GTD GSIR+P+ C GT G +PT Sbjct: 38 AHRLAALIRSKEVSALEVAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEELKSATK-LSPLAGVPIAVKDMILTRDMPTTAGS-KILEGWIPPYNATVIERISRARMPILGKTNQDEFGMGSSTEYSAYKTTRNPWDLSRTAGGSGGGSSAAVSASQAPLALGTDTGGSIRLPAHCTGTVGIRPT 224
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_TREPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema pallidum subsp. pallidum (strain SS14) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 67/197 (34.01%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 318 QLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETM--FSQALERAKYLDEYLE----------LHGKPVG--PLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 QL+ G +SSL + AF + S L + FS A E A+ D +G V PL GLP ++KD VKGK T G + + A ++ +V L GA+ +TN+ + M ++ +++G T NP + S T+GGSSGG A VA +P +GT+ GS+R+P+ CG YG +PT Sbjct: 17 QLEAGAISSLQIVRAFRNVYEEDTRSASPLGALVEFFSDAEEHARTADNLRASCAQSTKTAGANGGSVSGKPLLGLPFAVKDNISVKGKHCTCGS-KLLADYRAPYDATVVARLRAAGAIPLGRTNMDEFAMGSSTEYSVYGPTRNPRDRSRTSGGSSGGSAAAVAGGQAPFALGTETGGSVRLPAAYCGLYGLKPT 212 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |