FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_TREPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema pallidum GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 67/197 (34.01%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 318 QLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETM--FSQALERAKYLDEYLE----------LHGKPVG--PLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 QL+ G +SSL + AF + S L + FS A E A+ D +G V PL GLP ++KD VKGK T G + + A ++ +V L GA+ +TN+ + M ++ +++G T NP + S T+GGSSGG A VA +P +GT+ GS+R+P+ CG YG +PT Sbjct: 17 QLEAGAISSLQIVRAFRNVYEEDTRSASPLGALVEFFSDAEEHARTADNLRASCAQSTKTAGANGGSVSGKPLLGLPFAVKDNISVKGKHCTCGS-KLLADYRAPYDATVVARLRAAGAIPLGRTNMDEFAMGSSTEYSVYGPTRNPRDRSRTSGGSSGGSAAAVAGGQAPFALGTETGGSVRLPAAYCGLYGLKPT 212
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_TREDE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema denticola GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 65/191 (34.03%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 303 TEIARQLKTGELSSLAVTTAFAKRAA--IAQQLTSCLTETMFSQALERAKYLDEYLELHGK-PVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T++ +LK ELSSL + AF + L F A E AK DE + PL GLPI++KD + GK T ++ A N+ +++ LLE GAV+ + N+ + M ++ + +G + NP + + T GGSSGG A+VA +P +GT+ GS+R+P+ CG YG +PT Sbjct: 8 TQLRDKLKNKELSSLQILRAFKDEYEKDLKHPLPLNGFVEFFEDAEEHAKKADELIAQGVSFDEKPLLGLPIAVKDNISMAGKLCTC-CSRSLQGYYAPYNATVIDRLLEAGAVLMGRINMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLPASYCGIYGLKPT 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_MARMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinomonas sp. (strain MWYL1) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 67/195 (34.36%), Postives = 103/195 (52.82%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAA-IAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S + +A++L+ ++SS+ +T F R A + QL S +T + ALE+A D L+ GK L G+P++ KD F +G TT G + + + S + + + GAV+ KTN+ + M ++N+ +G NP N + GGSSGG A +A + GTD GSIR P+ CG G +PT RV Sbjct: 5 SISTLAQKLRNKDISSVELTRLFLARIAKLDPQLNSFITVSE-QHALEQAAAADVLLQ-SGKGTS-LTGIPVAHKDLFCTEGTLTTCGS-KMLHNFVPPYESTVTSRIQQAGAVMLGKTNMDEFAMGSSNENSFYGAVKNPWNLDMVPGGSSGGSAAAIAAGLAVAATGTDTGGSIRQPASFCGITGLKPTYGRV 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PROM4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9211) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 69/192 (35.94%), Postives = 99/192 (51.56%), Query Frame = 3 Query: 306 EIARQLKTGELSSLA-VTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E ++L E+SSL V FA+ + +L + L + A E AK +DE L GK + PL G+P +IKD KG +TT + ++ S + + L E GA++ KTN+ + M ++ + FG T NP + S GGSSGG A VA +G+D GSIR P+ CG G +PT RV Sbjct: 5 EWRQRLNNREISSLELVNEQFARIKDVDNKLHAFL-KLEEDSARENAKRIDE-ARLSGKELPPLAGIPFAIKDNLCTKGVKTTCSS-KMLESFVPPYESTVTQRLWEAGAILLGKTNLDEFAMGSSTETSAFGATSNPWDLSRVPGGSSGGSAAAVASGLCLAALGSDTGGSIRQPASFCGVVGLKPTYGRV 193
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PROM3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9303) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E +QLK GE+S+ + R A+ + +A A +DE L G+ + PL G+P++IKD KG +TT ++ S + E L + GAV+ KTN+ + M ++ + FG T NP + S GGSSGG A VA +G+D GSIR P+ CG G +PT RV Sbjct: 5 EWRQQLKLGEVSARELIDHQLARIAVVDPTLHAFLDVTAERARADADRIDEALAA-GESLPPLAGVPLAIKDNLCTKGIRTTCSS-RMLETFVPPYESTVTERLWQAGAVLLGKTNLDEFAMGSSTETSAFGATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYGRV 193
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_NITOC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 67/195 (34.36%), Postives = 100/195 (51.28%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAA-IAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S E+A LK E SS +T + KR + + L S +T + +AL++AK D L+ + G+P++ KD F G +T+ G + + + A N+ +V L GAV+ KTN+ + M ++ + +G NP GGSSGG A VA + +P GTD GSIR P+ CG G +PT RV Sbjct: 5 SLAELASALKAREFSSEELTQHYLKRIERLNEDLNSFITVST-EEALKQAKAADAILQ--SGEGSSITGIPLAHKDIFCTTGVKTSCGS-KMLDNFTAPYNATVVSRLKTAGAVMLGKTNMDEFAMGSSNETSFYGSVKNPWAHDRVPGGSSGGSAAAVAARLTPAATGTDTGGSIRQPAALCGITGLKPTYGRV 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CYAA5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain ATCC 51142) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 63/190 (33.16%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 S E+ +QL E S++ +TT +R + ALE AK +DE + + + +G L G+PI IKD G +TT G + + + S + + L + GAV+ KTN+ + M ++N+ + T NP + S GGSSGG A VA + +G+D GSIR P+ CG G +PT Sbjct: 3 SIRELHQQLVNKERSAVEITTEALERINAVDSKVKSFLQVTADHALETAKKVDEKIAKN-EEIGLLAGIPIGIKDNMCTTGIKTTCGS-KILANFVPPYESTVTQKLKDAGAVMVGKTNLDEFAMGSSTENSGYQVTANPWDLSRVPGGSSGGSAAAVAASECVVALGSDTGGSIRQPASLCGVVGLKPT 190
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 68/194 (35.05%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D EL GPL GLPI+ KD F +G ++TAG + + + + ++ +V L G V KTN+ + M ++N+ FG NP +T+ GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAARDLNA-FVHVEPELTLAQAKAADA--ELARGAGGPLTGLPIAHKDVFVTRGWRSTAGS-KMLANYESPFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_THETN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter tengcongensis GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 63/187 (33.69%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 E+ L E+S+ VT ++ +R + L ALERAK DE ++ L G+P+ IKD +G +TT + +++ N+ +VE LL G VI K+N+ + M ++N+ F T NP + S GGSSGG A VA + +G+D GSIR P+ CG G +PT Sbjct: 10 ELKELLHKREVSAQEVTKSYLERIKEVEPKIDALVTITEEFALERAKVADEMIK--NGEAKDLTGIPVIIKDNISTEGIRTTCSS-KMLENYIPPYNATVVERLLNEGVVILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAVAADEAAFALGSDTGGSIRQPASLCGVVGMKPT 193
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_THET8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gatA PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 67/195 (34.36%), Postives = 102/195 (52.31%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTE--TMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 A EI ++ GE+S L V A+ KR Q+L L ++ + LE A+ +D L PL GL +++KD +G +TTAG +++ + V L LGA++ KTN+ + M ++++ F T NP + GGSSGG A +A +PL +G+D GS+R P+ CG YG +PT RV Sbjct: 3 AHEIRARVARGEVSPLEVAQAYLKRV---QELDPGLGAFLSLNERLLEEAEAVDPGL--------PLAGLVVAVKDNIATRGLRTTAGS-RLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRV 185 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |