FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_THET2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 67/195 (34.36%), Postives = 102/195 (52.31%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTE--TMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 A EI ++ GE+S L V A+ KR Q+L L ++ + LE A+ +D L PL GL +++KD +G +TTAG +++ + V L LGA++ KTN+ + M ++++ F T NP + GGSSGG A +A +PL +G+D GS+R P+ CG YG +PT RV Sbjct: 3 AHEIRARVARGEVSPLEVAQAYLKRV---QELDPGLGAFLSLNERLLEEAEAVDPGL--------PLAGLVVAVKDNIATRGLRTTAGS-RLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRV 185
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SALRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber (strain DSM 13855) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 62/192 (32.29%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 303 TEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 T+ R L GE S A+ ++F +R + T AL A+YLD E G P PL GL +++KD ++G + G + + ++ ++ +++ L + GA+ KTN + M ++ + FG NPH GGSSGG A VA +G+D GS+R P+ CGT G +PT RV Sbjct: 7 TDARRALDAGETSCEALVSSFLERIDARDNEINAFTSVDQDGALNHARYLDSQRE-RGNP-RPLAGLVLAVKDNICIRGYPVSCGS-KMLADFSSLYDATVIDRLRDAGAIFIGKTNCDEFAMGSSNETSHFGPVRNPHAPEYVPGGSSGGSAAAVAAGLCHAALGSDTGGSVRQPAAFCGTVGLKPTYGRV 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_METMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 414 TMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T+ +ALE+AK +D+ E H GPL G+PI+IKD V G + G + ++ N+ ++E LL GAVI KTN+ + M ++ + FG T NP + GGSSGG A+VA +P +G+D GS+R P+ CG G +PT Sbjct: 41 TISDKALEQAKKIDK--EGHE---GPLAGVPIAIKDNISVVGLPNSCGS-KILEGYVPPFNAHVIEKLLSAGAVILGKTNMDEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPASFCGVVGLKPT 185
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_LEPBP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 58/192 (30.21%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 303 TEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +EI ++L G LSS + +A+ +R E + L++AK D+ + +GK + G+PI IKD + G+ T+ + +++ + ++ ++ L E G V++ + N+ + M ++N+ F + NP ++ GGSSGG A VA P+ +G+D GSIR P+ CG +G +PT RV Sbjct: 10 SEIKKRLNEGSLSSEELVSAYLERINAVDSKLKAFLELNQEKILKQAKESDDRRK-NGKLLSEFDGIPIGIKDNICITGEVTSCSS-KILENFVSPYDATVISKLKEKGFVLFPRLNMDEFAMGSSTENSAFQTSKNPFDSDRIPGGSSGGSAAAVAGSMLPISLGSDTGGSIRQPASLCGIWGLKPTYGRV 199
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_LEPBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 58/192 (30.21%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 303 TEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +EI ++L G LSS + +A+ +R E + L++AK D+ + +GK + G+PI IKD + G+ T+ + +++ + ++ ++ L E G V++ + N+ + M ++N+ F + NP ++ GGSSGG A VA P+ +G+D GSIR P+ CG +G +PT RV Sbjct: 10 SEIKKRLNEGSLSSEELVSAYLERINAVDSKLKAFLELNQEKILKQAKESDDRRK-NGKLLSEFDGIPIGIKDNICITGEVTSCSS-KILENFVSPYDATVISKLKEKGFVLFPRLNMDEFAMGSSTENSAFQTSKNPFDSDRIPGGSSGGSAAAVAGSMLPISLGSDTGGSIRQPASLCGIWGLKPTYGRV 199
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CORGL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium glutamicum GN=gatA PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T +A E+A + + E++S VT A R A +AL A +D+ L+ P L G+P+++KD F TTA + ++ + ++ + + E G I KTN+ + M ++N+ +G T NP + TAGGS GG A +A +PL +GTD GSIR P+ T G +PT Sbjct: 16 TKTAAELAGLIHSREVTSREVTQAHLDRIAAVDGDIHAFLHVGQEEALNAADDVDKRLDAGEAPASALAGVPLALKDVFTTTDAPTTAAS-KMLEGYMSPYDATVTRKIREAGIPILGKTNMDEFAMGSSTENSAYGPTHNPWDLERTAGGSGGGSSAALAAGQAPLAIGTDTGGSIRQPAALTNTVGVKPT 206
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CORGB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium glutamicum (strain R) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T +A E+A + + E++S VT A R A +AL A +D+ L+ P L G+P+++KD F TTA + ++ + ++ + + E G I KTN+ + M ++N+ +G T NP + TAGGS GG A +A +PL +GTD GSIR P+ T G +PT Sbjct: 16 TKTAAELAGLIHSREVTSREVTQAHLDRIAAVDGDIHAFLHVGQEEALNAADDVDKRLDAGEAPASALAGVPLALKDVFTTTDAPTTAAS-KMLEGYMSPYDATVTRKIREAGIPILGKTNMDEFAMGSSTENSAYGPTHNPWDLERTAGGSGGGSSAALAAGQAPLAIGTDTGGSIRQPAALTNTVGVKPT 206
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURVG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 67/194 (34.54%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D EL GPL G+PI+ KD F +G ++TAG + +++ + ++ +V L G V KTN+ + M ++N+ FG NP +T GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIDAARDLNA-FVHVDADLTLAQAKAADA--ELARGAGGPLTGVPIAHKDVFVTRGWRSTAGS-KMLENYQSPFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTHAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_ACIBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacteria bacterium (strain Ellin345) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 66/196 (33.67%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 T AT IA Q + + ++ A+ +F K+ + +AL +A +D + G + L GLP++IKD KG +TTAG + ++ A ++ +V+ L GAVI KTN + M ++N+ +G NP + S GGSSGG A+VA + +G+D GSIR P+ CG G PT RV Sbjct: 7 TIDATRIAIQER--QATATAIAESFYKKIEAEDGEINAYLTLSRDRALAQAAKIDAIAD-RGDDLPRLAGLPVAIKDVISTKGVRTTAGS-KILEEFIAPYDATVVQKLEAAGAVILGKTNCDEFAMGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGVVGLMPTYGRV 198
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PROAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Propionibacterium acnes GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19 Identity = 63/192 (32.81%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T +A E+ ++ ++SS VT A R + + AL+ A+ +D + G+ +GPL G+P+++KD F KG TTA + ++ +S +V + G VI KTN+ + M ++ + FG T NP + GGS GG A +A +PL +GTD GSIR P GT G +PT Sbjct: 6 TLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRIDARIA-DGEHLGPLAGVPLAVKDLFCTKGIATTASS-QMLEGWIPPYDSTIVTRCKDAGMVILGKTNLDEFAMGSSTETSAFGPTHNPWDLERVPGGSGGGSAASLASFQAPLALGTDTGGSIRQPGAVTGTVGIKPT 195 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |