FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCPA (Peptidyl-tRNA hydrolase OS=Mycobacterium paratuberculosis GN=pth PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.565e-31 Identity = 73/190 (38.42%), Postives = 100/190 (52.63%), Query Frame = 1 Query: 322 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +A P L VGLGNPGD Y TRHNVGF + D A G A G + V++AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +SV N G+++F R+RIGIGRPPG+ DP AF+L+ F + R + T ++ + +LL+ GL + H Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSKFKAHKRSGAEIVSGRLAGRSVVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSVANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIELGLEPAQNRVH 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCA1 (Peptidyl-tRNA hydrolase OS=Mycobacterium avium (strain 104) GN=pth PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.565e-31 Identity = 73/190 (38.42%), Postives = 100/190 (52.63%), Query Frame = 1 Query: 322 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +A P L VGLGNPGD Y TRHNVGF + D A G A G + V++AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +SV N G+++F R+RIGIGRPPG+ DP AF+L+ F + R + T ++ + +LL+ GL + H Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSKFKAHKRSGAEIVSGRLAGRSVVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSVSNAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIELGLEPAQNRVH 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_FRASC (Peptidyl-tRNA hydrolase OS=Frankia sp. (strain CcI3) GN=pth PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.565e-31 Identity = 62/188 (32.98%), Postives = 106/188 (56.38%), Query Frame = 1 Query: 331 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 PWL GLGNPG Y G RHN GF ++D AE G + + +A + + A +LA+P ++MNLSG ++YK+ ++R++V HD++ +P G +S+ ++ G R++ R+R+GIGRPPG+MDP F+L+ F + R + L+ + +++L++ GL + +H + Sbjct: 10 PWLVAGLGNPGPTYAGNRHNAGFMVVDLLAERTGSRLKSHRSRADVAETRLAGARAVLARPLSFMNLSGGPVAAARSFYKVEVSRLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSI-SSALGTRDYLRVRVGIGRPPGRMDPADFVLRDFTSTERRELPLLLEHAADSVEMLIADGLEPAQNRYHAL 196
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_FRAAA (Peptidyl-tRNA hydrolase OS=Frankia alni (strain ACN14a) GN=pth PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.552e-30 Identity = 63/188 (33.51%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 331 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 PWL VGLGNPG Y G RHN GF ++D AE G + + +A + + +LA+P ++MNLSG + +YK+ RV+V HD++ +P G +S+ ++ G R++ R+R+GIGRPPG+MDP ++L+ F A R + L+ + +++L++ GL + +H + Sbjct: 10 PWLVVGLGNPGPGYAGNRHNAGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGTRAILARPLSFMNLSGGPVSAVRTFYKIDPARVIVVHDELDIPFGSVRLKRGGGDNGHNGLRSI-SSALGTRDYLRVRVGIGRPPGRMDPADYVLRDFAAAERRELPLLLEHSADSVEMLITDGLEPTQNRYHAL 196
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCVP (Peptidyl-tRNA hydrolase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=pth PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.251e-30 Identity = 71/191 (37.17%), Postives = 106/191 (55.50%), Query Frame = 1 Query: 322 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +A P L VGLGNPG +Y TRHN GF ++D A+ G VH K A G + PV+LAKP+ YMN SG GPLA +Y + V++ HD++ + G +SV + GN +F R+R+GIGRPPG +F+L+ FN++ R+ + T L++ + +LL+++GL + H Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHNAGFMVVDILADRMGEKFK-VHKKSGAEVATGRLAGRPVVLAKPRVYMNESGRQVGPLAKFYSVAPADVVIVHDELDIDFGRIRLKAGGGVAGHNGLRSVASALGGN-DFQRVRVGIGRPPGHKSGASFVLENFNSVERKEVPTILEQAADATELLVAQGLEPAQNTVH 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACP2 (Peptidyl-tRNA hydrolase OS=Bacillus pumilus (strain SAFR-032) GN=pth PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.470e-30 Identity = 75/183 (40.98%), Postives = 98/183 (53.55%), Query Frame = 1 Query: 340 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 FVGLGNPG +Y+ TRHNVGF ID ++ I +N FG GFV VLL KP TYMNLSGE PL YY +PL + V +DD+ LP G KS++ + G+ EF R RIGIGRP M ++L +F+ + I +A+Q VE + L+K E F+ Sbjct: 4 FVGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPLTYMNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL-GSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVMNDFN 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCS2 (Peptidyl-tRNA hydrolase OS=Mycobacterium smegmatis GN=pth PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.237e-29 Identity = 72/191 (37.70%), Postives = 105/191 (54.97%), Query Frame = 1 Query: 322 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +A P L VGLGNPG Y TRHN+GF + D A G + VH K A G + V+LAKP+ YMN SG GPLA +Y +P +++V HD++ + G +SV + G + F R+RIG+GRPPG+ DP AF+L+ F A R + T +++ + +LL+++GL + H Sbjct: 1 MAEPLLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIGSAFK-VHKKSGAEVVTGRLAGTSVVLAKPRCYMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVASAL-GTKNFHRVRIGVGRPPGRKDPAAFVLENFTAAERAEVPTIVEQAADATELLIAQGLEPAQNTVH 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CHLSY (Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pth PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 66/188 (35.11%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 WL VGLGNPG++Y TRHN+GF +D AE G++ + +G + V+LAKPQTYMNLSG++ L +YK+ P +LV +DD+ LP +S++ G EF RLR+GIG+PPG+MD ++L +F + L + ++++L +GLT + ++ + Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKPQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQL-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTTAMNRYNPL 188
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CHLAA (Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pth PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 66/188 (35.11%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 WL VGLGNPG++Y TRHN+GF +D AE G++ + +G + V+LAKPQTYMNLSG++ L +YK+ P +LV +DD+ LP +S++ G EF RLR+GIG+PPG+MD ++L +F + L + ++++L +GLT + ++ + Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKPQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQL-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTTAMNRYNPL 188
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOD6 (Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630) GN=pth PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.016e-29 Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 ++ VGLGNPG KY+ TRHNVGF++ID A+ IS+ + KA G+G VG VLL KPQTYMNLSGE+ + YYK+ L+ ++V +DD+ L G KS+ G+ +F R+R+G+ +P D F+L +F + I+ AL++ + + ++ + + S ++ Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSI-TKCLGSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSMNKYN 185 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |