FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_NOCFA (Peptidyl-tRNA hydrolase OS=Nocardia farcinica GN=pth PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.332e-28 Identity = 71/188 (37.77%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 331 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 P L VGLGNPG +Y+ TRHNVGF + D AE G VH K A Q + VL+AKP++YMNLSG LA ++ +P V+V HD++ LP G +S+ + +++ R RIGIGRPPG+ DP F+L+ F A R+ + +++ + ++LLL GL + H Sbjct: 8 PALVVGLGNPGSEYERTRHNVGFLVADVLAERVGDRF-AVHKKSGADLLQARLDGRQVLIAKPRSYMNLSGRPVAALARFFSVPPTEVIVVHDELDLPFGAVRLKRGGGEGGHNGLRSISSALT-TKDYLRTRIGIGRPPGRQDPADFVLKPFAAAERKEVPVIVEQAADAVELLLRVGLEAAQNQLH 193
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_DEHSC (Peptidyl-tRNA hydrolase OS=Dehalococcoides sp. (strain CBDB1) GN=pth PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.979e-28 Identity = 68/187 (36.36%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQ---MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L +GLGNPG +Y G RHNVGF+ + FA+ IS + C + G G + D ++LAKPQTYMNLSG++ L Y L ++V DD+ LP G S++ + G +EF RL+IGIG+P + + +L F RE I+TA+ E L L++ GL ++ F+ Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAKPQTYMNLSGKAVNQLLRRYNLKATDIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIITDI-GTKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREIIETAIARAAEALACLITSGLDTASNRFN 188
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CARHZ (Peptidyl-tRNA hydrolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pth PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 3.979e-28 Identity = 68/185 (36.76%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 ++ GLGNPG +Y+ TRHN GF ++D A+ GI + K+ G+G + VLL KPQTYMNLSG + ++YKLPL+R++V +DD+ LP G S+++ G+ E RL+IGIGR P D K ++LQ F RE ++ L+ E + + L++G ++ F+ Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL-GSEEIPRLKIGIGR-PAVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAMTDFN 184
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACCN (Peptidyl-tRNA hydrolase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pth PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.196e-28 Identity = 70/184 (38.04%), Postives = 98/184 (53.26%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ L ++ +DD+ LP G KS + + G +EF R+R+GI RP M ++L +F A ++ A+++ + L+K + F+ Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIAHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEEMVDVNHAIEKAANACEEWLNKSFLQVMNDFN 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_DEHSB (Peptidyl-tRNA hydrolase OS=Dehalococcoides sp. (strain BAV1) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28 Identity = 68/187 (36.36%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQ---MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L +GLGNPG +Y G RHNVGF+ + FA+ IS + C + G G + D ++LAKPQTYMNLSG++ L Y L ++V DD+ LP G S++ + G +EF RL+IGIG+P + + +L F RE I+TA+ E L L++ GL ++ F+ Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAKPQTYMNLSGKAVNQLLRRYNLKAADIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIITDI-GTKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREIIETAIARAAEALACLITSGLDTASNRFN 188
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLONN (Peptidyl-tRNA hydrolase OS=Clostridium novyi (strain NT) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28 Identity = 66/185 (35.68%), Postives = 103/185 (55.68%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +L VGLGNPG +Y+ TRHNVGF++ID +E I +N K +G G + + V+L KP TYMNLSGES + +YK+P V+V +DD+ L G K+++ +F G+ F R+++G+G+P Q D + +L KFN RE + + + + ++ KG E+ F+ Sbjct: 2 FLIVGLGNPGKEYEHTRHNVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLKPLTYMNLSGESIKEVTDFYKIPKENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHF-GSDVFPRIKVGVGQPV-QRDLVSHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAEAMNKFN 184
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCGI (Peptidyl-tRNA hydrolase OS=Mycobacterium gilvum (strain PYR-GCK) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.863e-28 Identity = 69/191 (36.13%), Postives = 103/191 (53.93%), Query Frame = 1 Query: 322 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +A P L VGLGNPG +Y TRHN+GF + D A+ G + VH K A G + PV+LAKP+ YMN SG GPLA +Y + V++ HD++ + G +SV + N +F R+R+GIGRPPGQ +F+L+ FN+ R + T +++ + +LL+ G+ + H Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHNIGFMVADVLADRMGETFK-VHKKSGAEVTTGRLAGRPVVLAKPRVYMNESGRQVGPLAKFYSIAPTDVVIIHDELDIDFGRIRLKAGGGVAGHNGLRSVGSALSTN-DFQRVRVGIGRPPGQKSGASFVLEPFNSRERPELGTIIEQAADATELLIELGIEPAQNTVH 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BDEBA (Peptidyl-tRNA hydrolase OS=Bdellovibrio bacteriovorus GN=pth PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.512e-27 Identity = 67/187 (35.83%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 WL VGLGNPG +YK TRHN+GF +D E G KA Q + D PV+ KPQTYMNLSGES PL +YK+PL R++V HD++ P KS+ + G+ ++ RLR+G+GRP P ++L KF ++ L + + ++ ++ G+ +++ F+T Sbjct: 2 WLIVGLGNPGGEYKLTRHNIGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCKPQTYMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSI-SGLMGSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQKASTKFNT 187
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCTU (Peptidyl-tRNA hydrolase OS=Mycobacterium tuberculosis GN=pth PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.975e-27 Identity = 68/190 (35.79%), Postives = 96/190 (50.53%), Query Frame = 1 Query: 322 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +A P L VGLGNPG Y TRHN+GF + D A G A G ++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+ +G+ + H Sbjct: 1 MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVH 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCTA (Peptidyl-tRNA hydrolase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.975e-27 Identity = 68/190 (35.79%), Postives = 96/190 (50.53%), Query Frame = 1 Query: 322 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +A P L VGLGNPG Y TRHN+GF + D A G A G ++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+ +G+ + H Sbjct: 1 MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVH 189 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |