FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ANADE (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pth PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26 Identity = 67/179 (37.43%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 873 L VGLGNPG++Y TRHNVGF + D A+ G S A + +G V + KPQTYMN SGE+ G ++KL L+ ++V HDD+ L KSV N G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G ++ Sbjct: 3 LVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFTAKKFAAELAEARLGPERVWILKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELEPFRVQLKVGGGHGGHNGVKSV-NAHVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAAKA 180
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ANAD2 (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pth PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26 Identity = 67/175 (38.29%), Postives = 96/175 (54.86%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 861 L VGLGNPG++Y TRHNVGF + D A+ G S + A + +G V + KPQTYMN SGE+ G ++KL L+ ++V HDD+ L KSV N G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G Sbjct: 3 LVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSV-NAHVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELG 176
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_NITOC (Peptidyl-tRNA hydrolase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=pth PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.863e-26 Identity = 67/194 (34.54%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD--------APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 WL +GLGNPG +Y TRHN GF +DAFA GI+ G F GD + L KP T+MN SG++ L YY++PL +L+ HDD+ LP GV + ++N G R+F RLR+G+G P D +++L + + R+ I+ A+ G+EVL +L+ + ++ H+ Sbjct: 6 WLLIGLGNPGTEYAQTRHNAGFWWLDAFASELGINFKP-------GAKFFGDYARANWRGHDLWLLKPATFMNRSGQAVLALLNYYQIPLEHLLIAHDDLDLPPGVAKLKRAGGHGGHNGLRDIINRL-GRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIEAAIGAGLEVLPEVLAGEMEKAMHRLHS 191
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOTE (Peptidyl-tRNA hydrolase OS=Clostridium tetani GN=pth PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.863e-26 Identity = 65/188 (34.57%), Postives = 101/188 (53.72%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 +L VGLGNPG +Y+ TRHN+GFE +D + I + K FG G + + V+L KP TYMNLSGES + YY +P+ V+V +DD+ L G KS++ N + +F RLRIG+G+P Q D + +L KF + I+ L+ E+ ++++G E+ ++ + Sbjct: 2 FLLVGLGNPGKEYEKTRHNIGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLKPTTYMNLSGESLREIIEYYNIPITNVIVIYDDVDLEVGRLRIRTKGSAGGHNGIKSIIYNL-NSEDFIRLRIGVGKP--QRDMVSHVLGKFAKEDEKNIEEVLKIIPELAYTIINQGPQEAMNKYNNFR 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_SYNAS (Peptidyl-tRNA hydrolase OS=Syntrophus aciditrophicus (strain SB) GN=pth PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26 Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 783 L VGLGNPG +Y+ TRHN GF ++D AE Q I M+ A +G+G + VLLAKPQT+MNLSG+S LA ++K+ + VLV HDD+ LP GV S+ ++ G EF R+R+GIG+P + + ++L+ F Sbjct: 3 LIVGLGNPGARYRFTRHNFGFFVLDQLAEDQDIMMSQTGFDALWGKGVIAGQSVLLAKPQTFMNLSGKSVRKLADFFKIVVEDVLVVHDDLDLPFGVIRLKAGGGQGGHKGLISICDSL-GGPEFQRVRLGIGKPAQRSAVERYVLEPF 150
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOBL (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pth PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26 Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 +L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G K+++ + + F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE+ ++ ++ Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOBJ (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pth PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26 Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 +L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G K+++ + + F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE+ ++ ++ Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOBH (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pth PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26 Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 +L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G K+++ + + F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE+ ++ ++ Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOB6 (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=pth PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26 Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 +L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G K+++ + + F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE+ ++ ++ Sbjct: 2 YLVVGLGNIGKEYKQTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOB1 (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pth PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26 Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 +L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G K+++ + + F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE+ ++ ++ Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |