FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_PELCD (Peptidyl-tRNA hydrolase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=pth PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.083e-25 Identity = 61/184 (33.15%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L VGLGNPG +Y TRHN+GF + FA+ G+S+ + G G ++ PQTYMN SG S + + V+V HD++ LP G +S++ + G R+F R+R+G+GRP GQ+D ++L +F++ + ++D L+ V+ L++LL KG ++ F+ Sbjct: 3 LVVGLGNPGPEYAATRHNIGFLVAQKFAQQMGVSLKRQAYQGIVGTGRADGQETMVLLPQTYMNRSGVSVVSACKSKGIAVEDVVVIHDEIDLPFGSIRIKVGGGHGGHNGLRSIV-DLLGCRDFLRVRMGVGRPQGQVDVAKYVLGQFSSTEKSQLDNVLENSVKALEVLLQKGAQQAMNEFN 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOBM (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pth PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.083e-25 Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 +L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G K+++ + + F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE+ ++ ++ Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDQREVIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_RENSM (Peptidyl-tRNA hydrolase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=pth PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.415e-25 Identity = 63/192 (32.81%), Postives = 103/192 (53.65%), Query Frame = 1 Query: 322 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG--FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 ++ WL VGLGNPG Y TRHN+GF + + A G S + +A +G +G ++LAKPQT+MNLSG T LA +Y L + V+ D++ +P + + + G +E+ R+R+G+GRPP GQ D +L+ F+ ++ + +Q+ + ++LL+S GL + + FH Sbjct: 1 MSNTWLVVGLGNPGPDYSHTRHNIGFMVAEELASRIGASFKSNKSRALVAEGRLGMGGPKLVLAKPQTFMNLSGGPTSALAKFYDLGADNVIAVQDEIDIPFNTIKLKIGGGEGGHNGLRDI-SKALGAKEYLRVRVGVGRPPGGQGDAAGHVLKVFSTAEKKELPFLIQDAADAVELLISDGLLAAQQKFH 191
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOPH (Peptidyl-tRNA hydrolase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=pth PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.415e-25 Identity = 62/176 (35.23%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 861 ++ +GLGNP +Y+ TRHN+GF+ I A+ IS++T KA G+G +G V+LAKPQTYMNLSGES L +YK+ ++V +DD+ L G K+++ + G+ EF R++IG+G P D ++L +F I AL++ + + +L G Sbjct: 2 YIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKPQTYMNLSGESVRELIDFYKVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAHL-GSDEFCRIKIGVGDKPKNWDLADYVLARFPKEEEPAIREALEKVSKACETILRDG 176
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_SYNJA (Peptidyl-tRNA hydrolase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pth PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.848e-25 Identity = 68/187 (36.36%), Postives = 96/187 (51.34%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 L VGLGNPG +Y TRHN GF ++D AE GI + + ++G+GF L KP+TYMN SGE+ + +YKL VLV +DDM LP G KSV+ + G+ F RLR+G+GRP G D +L F + +D L+ V ++ L +GL + F+ + Sbjct: 16 LIVGLGNPGPQYANTRHNCGFMVVDQLAERWGIPLALEKRFQGSYGEGFALGGKRRLLKPETYMNRSGEAVRAVLDWYKLDPASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSVIEHL-GSEAFPRLRLGVGRPKGNQDRVGHVLGSFEPAEQAVLDRVLRAAVAAVECCLQEGLKTAMNRFNPL 201
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOPE (Peptidyl-tRNA hydrolase OS=Clostridium perfringens GN=pth PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.848e-25 Identity = 65/186 (34.95%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 L VGLGNPG +Y+ TRHN+GF++ID A I +N K G+GF+ + V+L KP TYMNLSGES LA +YKL + ++V +DD+ L G KS++ N G++ F R+++G+G+P + +L KF+ RE I+ + + + ++ ES F+ + Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMNKFNGV 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOP1 (Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pth PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.848e-25 Identity = 65/186 (34.95%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 L VGLGNPG +Y+ TRHN+GF++ID A I +N K G+GF+ + V+L KP TYMNLSGES LA +YKL + ++V +DD+ L G KS++ N G++ F R+++G+G+P + +L KF+ RE I+ + + + ++ ES F+ + Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMNKFNGV 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ROSS1 (Peptidyl-tRNA hydrolase OS=Roseiflexus sp. (strain RS-1) GN=pth PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25 Identity = 62/178 (34.83%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 864 WL VGLGNPGD Y TRHN+GF ++ A+ + A +G + V LA PQTYMNLSG++ L +YK+ P +LV +DD+ LP GV +S++ G++ F RLRIGI RPP D ++L +F ++ +Q+ + L+ ++ +G+ Sbjct: 2 WLIVGLGNPGDTYARTRHNIGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALALPQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSII-TLLGSQVFPRLRIGIDRPPPAWDLADYVLGRFTPEQEAQLPDIMQKAADALETVVREGM 178
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BREBN (Peptidyl-tRNA hydrolase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pth PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25 Identity = 63/188 (33.51%), Postives = 97/188 (51.60%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQK 900 + +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G + VLL KPQTYMNLSGES + +YKL + ++V +DD+ LP G KS++ + G +EF R+++GI RP ++L F R I A+ + + + + HF++++K Sbjct: 3 VIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVKPQTYMNLSGESVAEVLKFYKLIPDDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHL-GTQEFKRIKVGISRPEPGRSVSDYVLNTFPVAERADIQEAVSLAADACAMWTRESFLKVMNHFNSLKK 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_EXISA (Peptidyl-tRNA hydrolase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=pth PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 63/163 (38.65%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 343 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 831 VGLGNPG K++ TRHNVGF ID AE GIS+N A G G + V+L KP TYMNLSGE+ P+ YYK+ ++ +LV +DD+ + G KS++ + G EF RL++GIGRPP + ++L + ++ L V Sbjct: 5 VGLGNPGKKFEMTRHNVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPLTYMNLSGEAVRPILDYYKIEIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQHL-GTAEFKRLKLGIGRPPHPIKVVDWVLMNYRKDELPELNETLDNAV 166 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |