FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYXXD (Peptidyl-tRNA hydrolase OS=Myxococcus xanthus (strain DK 1622) GN=pth PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.565e-24 Identity = 64/190 (33.68%), Postives = 100/190 (52.63%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKA------FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L VGLGNPG +Y+ RHN+GF +++A +N A GQG + VL +PQT+MNLSG S A ++K+P+ VLV HD++ LP G KS++++ G+ F RLR GIG+P G P A ++L F+ R +D + +++ +L + +GL+ + F+ Sbjct: 3 LIVGLGNPGREYERHRHNIGFMVVEALLSRARAQLNQEKFAAKVGQGTLAGERVLFVEPQTFMNLSGRSVAEAARFFKVPVADVLVIHDELDLPLGRLQLKAGGGSGGHNGLKSIVSSL-GDESFIRLRFGIGKPEG---PNARERVSDYVLSNFDDGERREMDALIDRAMDMTELWIREGLSVAMNRFN 188
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_GEOTN (Peptidyl-tRNA hydrolase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pth PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.565e-24 Identity = 59/149 (39.60%), Postives = 84/149 (56.38%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 783 LFVGLGNPG +Y+ TRHN+GF +ID A+ +S+ T + FG V V L KP TYMNLSGE PL +Y + ++ V++ +DD+ LP G KS++++ G +F R+RIGIGRP ++L +F Sbjct: 3 LFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKPLTYMNLSGECVCPLIDFYDIAVDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHL-GTEQFKRIRIGIGRPTNGQPVADYVLSRF 150
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOPS (Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain SM101 / Type A) GN=pth PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.565e-24 Identity = 63/186 (33.87%), Postives = 99/186 (53.23%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 L VGLGNPG +Y+ TRHN+GF++ID A I +N K G+GF+ + V+L KP TYMNLSGES +YKL + ++V +DD+ L G KS++ N G++ F R+++G+G+P + +L KF+ RE I+ + + + ++ ES F+ + Sbjct: 3 LIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIREFVNFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMNKFNGV 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ALKMQ (Peptidyl-tRNA hydrolase OS=Alkaliphilus metalliredigens (strain QYMF) GN=pth PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.565e-24 Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRP 741 ++ VGLGNPG KY GTRHNVGF++ID A GI++N + KA +G+ +G V+LAKPQT+MNLSGES + +YK+ ++V +DD+ + G KS + + + F R+RIG+GRP Sbjct: 2 YIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKPQTFMNLSGESIREMMQFYKIDPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIYQLQTD-AFPRIRIGVGRP 136
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ROSCS (Peptidyl-tRNA hydrolase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pth PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.669e-24 Identity = 62/178 (34.83%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 864 WL VGLGNPG+ Y TRHN+GF ++ A+ + KA +G + V LA PQTYMNLSG++ L +YK+ P +LV +DD+ LP GV +S++ G++ F RLRIGI RPP + ++L +F ++ + + L+L+L +G+ Sbjct: 2 WLIVGLGNPGETYARTRHNIGFRVVTELAQRHHLRFTHKRAKAEIAEGEIAGQRVALALPQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIV-ALLGSQVFPRLRIGIDRPPVAWNLADYVLARFTPEQEAQLPEVTRRAADALELVLREGI 178
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCLE (Peptidyl-tRNA hydrolase OS=Mycobacterium leprae GN=pth PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.669e-24 Identity = 68/188 (36.17%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 331 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 P L VGLGNPG Y TRHNVGF + + A G S VH + A G + +L+AKP+ YMN SG+ G LA Y + +++ HDD+ L G +SV G ++F R+RIGIGRP G+ DP +F+L+ F R ++ T + + +LL+ GL + H H Sbjct: 12 PRLVVGLGNPGKNYGRTRHNVGFMVANLLAVRLG-SKFEVHKRSGADVVNGRLAGCSMLVAKPRNYMNESGQQVGLLAKLYSVTPADIIIVHDDLDLDFGRIRLKLGGGEGGHNGLRSVAAAL-GTKDFQRVRIGIGRPTGRKDPASFVLENFTTAERMQVPTICKRAADATELLVGLGLEPAQNHVH 197
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCLB (Peptidyl-tRNA hydrolase OS=Mycobacterium leprae (strain Br4923) GN=pth PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.669e-24 Identity = 68/188 (36.17%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 331 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 P L VGLGNPG Y TRHNVGF + + A G S VH + A G + +L+AKP+ YMN SG+ G LA Y + +++ HDD+ L G +SV G ++F R+RIGIGRP G+ DP +F+L+ F R ++ T + + +LL+ GL + H H Sbjct: 12 PRLVVGLGNPGKNYGRTRHNVGFMVANLLAVRLG-SKFEVHKRSGADVVNGRLAGCSMLVAKPRNYMNESGQQVGLLAKLYSVTPADIIIVHDDLDLDFGRIRLKLGGGEGGHNGLRSVAAAL-GTKDFQRVRIGIGRPTGRKDPASFVLENFTTAERMQVPTICKRAADATELLVGLGLEPAQNHVH 197
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_LEIXX (Peptidyl-tRNA hydrolase OS=Leifsonia xyli subsp. xyli GN=pth PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.669e-24 Identity = 62/188 (32.98%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 WL VGLGNPG Y TRHNVG ++D A +S T AT +G + G +LAKP TYMN SG L +Y L +R++V D++ +P + V+ G+ +F R+R+G+GRPPG +L+ F+A R+ + + + + ++ + ++GLT + FHT Sbjct: 5 WLVVGLGNPGPGYAATRHNVGQLVLDELASRDRLSFKTHKTNATVAEGRIVPGGPRFVLAKPNTYMNGSGGPVSQLLRFYSLEPSRLIVVQDELDIPFDTLRLKFGGGHGGHNGVRDVIAEV-GSGDFTRVRVGVGRPPGVQAAADHVLKGFSAAERKNLPILVADAADAVERIAAEGLTAAQNRFHT 191
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACHD (Peptidyl-tRNA hydrolase OS=Bacillus halodurans GN=pth PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.669e-24 Identity = 61/184 (33.15%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L VGLGNPG KY GTRHNVGF+++DA A I + +G+G + + L KPQT+MN SGES P YY + + +LV +DD+ LP G KS++ + G +F R+R+G+ RP +L ++ ++ I A+ E + K E F+ Sbjct: 3 LIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLKPQTFMNRSGESVRPFLEYYNMEVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHL-GTSDFKRIRVGVDRPAPGETVVQHVLGRYRPEEKDAISEAIDLSAEAAEAFTKKPFLEVMNTFN 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_THEPX (Peptidyl-tRNA hydrolase OS=Thermoanaerobacter sp. (strain X514) GN=pth PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.945e-24 Identity = 62/185 (33.51%), Postives = 100/185 (54.05%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 ++ GLGNPG +Y+GTRHNVGF +ID A+ G+++ + K+ G+G ++L KPQT+MN SGE+ +YK+PL V+V +DD L G S++ + EF R+RIGIG+P Q D + +L KF ++ ID A+ + + + ++ G+ + F+ Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFMNSSGEALYDAVNFYKIPLENVIVIYDDKDLDLGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |