FC877997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2B_MOUSE (Ribonucleoside-diphosphate reductase subunit M2 B OS=Mus musculus GN=Rrm2b PE=1 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 1.037e-89 Identity = 160/236 (67.80%), Postives = 190/236 (80.51%), Query Frame = 2 Query: 50 EEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 EEPL + RF +FPI YP+IW MY++A+ASFWTAEEV LS+DLP W L + EK+FI+H+LA FA SDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE+RV I+ +AV+IE+EF+ Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIADAVQIEQEFL 266
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_TRYBB (Ribonucleoside-diphosphate reductase small chain OS=Trypanosoma brucei brucei GN=RNR2 PE=2 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 1.769e-89 Identity = 157/236 (66.53%), Postives = 183/236 (77.54%), Query Frame = 2 Query: 50 EEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVMGIVKEAVEIEREFV 754 EEPL T NPDR+ +FPI YP+IW+ Y++AE+S WT EE+ L D+ WE L E+HFI HVLA FA SDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ + DEK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV+ I+ AV IEREF+ Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFI 251
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_NEUCR (Ribonucleoside-diphosphate reductase small chain OS=Neurospora crassa GN=rnr-2 PE=3 SV=2) HSP 1 Score: 323.939 bits (829), Expect = 5.692e-88 Identity = 160/244 (65.57%), Postives = 190/244 (77.87%), Query Frame = 2 Query: 29 TKMPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWES-LTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 T P EPL T NP RF LFPI Y EIW+MY+KAEASFWTAEE+ LS+DL W + L EK FI+H+LA FA SDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK +++ LF A +T+PC+ KKADWAL WI D S TFA+RL+AFA VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ + I+ +AV IE+EF+ Sbjct: 69 TLKPEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQEFL 312
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_LEIAM (Ribonucleoside-diphosphate reductase small subunit OS=Leishmania amazonensis PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.831e-86 Identity = 152/245 (62.04%), Postives = 188/245 (76.73%), Query Frame = 2 Query: 23 KITKMPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVMGIVKEAVEIEREFV 754 K+ + + EEPL NP R+ LFPI Y +IW Y++ E+ WT EE+ L D+ W +L E+HFI HVLA FA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+EK RL A +T+PC+ KKA+W + WI S +F +RLI FA VEGIFFSGSFCA+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV+ I+ +AV IEREF+ Sbjct: 15 KVAQGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFI 259
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_DROME (Ribonucleoside-diphosphate reductase subunit M2 OS=Drosophila melanogaster GN=RnrS PE=1 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 1.187e-85 Identity = 152/235 (64.68%), Postives = 186/235 (79.15%), Query Frame = 2 Query: 53 EPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 EPL NP RF +FPI Y +IW+MY+KAEASFWT EEV LS+DL W L E+HFI+HVLA FA SDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI++ ++ LF A ET+P V +KADWAL+WI S F ER+IAFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER++ I+++AV IE+EF+ Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_PLAF4 (Ribonucleoside-diphosphate reductase small chain OS=Plasmodium falciparum (isolate Dd2) GN=RNR2 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 3.453e-85 Identity = 148/234 (63.25%), Postives = 182/234 (77.78%), Query Frame = 2 Query: 53 EPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 E + DRF L+PI YP++W+ Y+KAEASFWTAEE+ LS DL +E L +EKHFI HVLA FA SDGIVLENLA++F++EVQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E+ LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF CL+YSLL NKL E+ + IVKEAVE+ER F+ Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIVKEAVEVERSFI 264
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_SWPVK (Ribonucleoside-diphosphate reductase small chain OS=Swinepox virus (strain Kasza) GN=C14L PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.714e-84 Identity = 148/234 (63.25%), Postives = 184/234 (78.63%), Query Frame = 2 Query: 53 EPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 EP+ + RF +FPI Y +IW+MY+++ ASFWT EEV LS+DL W+ LT EK+FI H+LA FA SDGIV ENLA RF +VQ SEAR FYGFQIA+ENIHSEMYSLL++TY++++ EK LF A ET+ CV KKADWA WI ++ + ER++AFA VEGIFFSGSF AIFW+KKRGLMPGLTFSNELISRDEGLHCDFACL++ L + S+E + I+ +AV IE+EF+ Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKHILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIEKMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFL 235
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_ENCCU (Ribonucleoside-diphosphate reductase small chain OS=Encephalitozoon cuniculi GN=ECU06_0730 PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 7.961e-82 Identity = 150/235 (63.83%), Postives = 185/235 (78.72%), Query Frame = 2 Query: 53 EPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 E L P +RF L PI Y +IW+MY+KAE+SFWT EEV L +D+ W L A E+HFI++VLA FA SDGIV NL RF EV+V EAR FYGFQ+AIENIHSEMYSLL++TYI+++DEK+ LF A T+P V +KADWA+ WI D + FA RL+AFACVEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLHC+FACLL+ L+ K + R+ +V +AVEIE++F+ Sbjct: 8 ELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDEKNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFL 240
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_YLDV (Ribonucleoside-diphosphate reductase small chain OS=Yaba-like disease virus GN=20L PE=3 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.358e-81 Identity = 148/235 (62.98%), Postives = 181/235 (77.02%), Query Frame = 2 Query: 53 EPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 EP+ P +++ +FPI Y +IW+MY+KA ASFWT EEV LS+D W L+ +EK+FI H+LA FA SDGIV ENLA RF EVQ+SEAR FYGFQIA+ENIHSEMYSLL++TYI +S EK+ LF A E + CV +KA+WA WI+ + T+ ERL+AFA VEGIFFSGSF AIFW+KKRGLMPGLTFSNELISRDEGLHCDFAC+++ L N V I+ EAV IE+ F+ Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKHILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKEKNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKRGLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFL 240
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_CAEEL (Ribonucleoside-diphosphate reductase small chain OS=Caenorhabditis elegans GN=rnr-2 PE=1 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.774e-81 Identity = 149/236 (63.14%), Postives = 182/236 (77.12%), Query Frame = 2 Query: 50 EEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 +EP+ +RF +FP+ + +IW Y+KA ASFWT EEV L +D+ WE + E++FI+ +LA FA SDGIV ENL RF EVQVSEAR FYGFQIAIENIHSEMYS L+ETYI++ E++ LF A + + KKADWAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKKRGLMPGLT SNELISRDEGLH DFACLLYS L+ KL+++R+ I+K+AV IE+EF+ Sbjct: 61 DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDETERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYDIIKDAVAIEQEFL 296 The following BLAST results are available for this feature:
BLAST of FC877997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877997 ID=FC877997; Name=FC877997; organism=Citrus clementina; type=EST; length=755bpback to top |