FC877997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR4_YEAST (Ribonucleoside-diphosphate reductase small chain 2 OS=Saccharomyces cerevisiae GN=RNR4 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.607e-50 Identity = 101/235 (42.98%), Postives = 154/235 (65.53%), Query Frame = 2 Query: 50 EEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREF 751 +E L N RF +FPI Y EIW Y+K EASFWTAEE+ L++D ++ LT +K +I ++LAL SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + K+ + LF+ +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL + +MPGL +N I RD G + DF+CLL++ LR K + + + I+ EAVEIE+E+ Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKD-PKNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEY 257
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_OSHV1 (Ribonucleoside-diphosphate reductase small chain OS=Ostreid herpesvirus 1 GN=ORF20 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.440e-24 Identity = 73/229 (31.88%), Postives = 113/229 (49.34%), Query Frame = 2 Query: 77 DRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF---ETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREF 751 D L P Y ++ + K E+S W E+ D+P WE ++ +E+ + VLA FA D +V + +A F E + E + F +Q E +H +Y+ L+ +K+ + L A+ E P + KK DW I +++ E ++ C E I F+ SF AI + M L NE I RDE LH F L L+ ++ S+ER+ ++ EA EIE EF Sbjct: 70 DHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDRIAI-FADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFAP-IKKKVDWLGKIISVENDSRGEMVVGQVCTEAIMFAASF-AILLKFRAPYMRALVLGNEFIRRDETLHFRFYAELLRLMPDRPSDERIAELLTEATEIELEF 295
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_HHV11 (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 1 (strain 17) GN=UL40 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.335e-19 Identity = 66/233 (28.33%), Postives = 110/233 (47.21%), Query Frame = 2 Query: 68 PNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFE-TVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVMGIVKEAVEIEREFV 754 P+P+R+ + P+I + + + W E+ D L+ E F + A + +D +V ENL + + +Y Q IE +HS +Y+++ N+D+ R + A P + K DW + + E+ I +EGIFF+ SF AI +L+ L+ SN+LISRDE +H +C +Y+ K +RV G+ ++AVEIE F+ Sbjct: 32 PDPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFI 262
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_HHV2H (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 2 (strain HG52) GN=UL40 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18 Identity = 67/239 (28.03%), Postives = 113/239 (47.28%), Query Frame = 2 Query: 56 PLPT-PNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETV--PCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVMGIVKEAVEIEREFV 754 P+P P P+R+ + P+I + + + W E+ D L+ E F + A + +D +V ENL + + +Y Q IE +HS +Y+++ N+D+ R + A T+ P + K DW + ++ E+ I +EG+FF+ SF AI +L+ L+ SN+LISRDE +H +C +Y+ K RV + +EAV+IE F+ Sbjct: 24 PIPVCPTPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELGFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVA-RTINHPAIRVKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEIGFI 259
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_HHV23 (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 2 (strain 333) PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18 Identity = 67/239 (28.03%), Postives = 113/239 (47.28%), Query Frame = 2 Query: 56 PLPT-PNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETV--PCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVMGIVKEAVEIEREFV 754 P+P P P+R+ + P+I + + + W E+ D L+ E F + A + +D +V ENL + + +Y Q IE +HS +Y+++ N+D+ R + A T+ P + K DW + ++ E+ I +EG+FF+ SF AI +L+ L+ SN+LISRDE +H +C +Y+ K RV + +EAV+IE F+ Sbjct: 24 PIPVCPTPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELGFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVA-RTINHPAIRVKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEIGFI 259
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_HHV1K (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 1 (strain KOS) GN=UL40 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.134e-18 Identity = 66/233 (28.33%), Postives = 109/233 (46.78%), Query Frame = 2 Query: 68 PNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFE-TVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVMGIVKEAVEIEREFV 754 P+P+R+ + P+I + + + W E+ D L+ E F + A + +D +V ENL + + +Y Q IE HS +Y+++ N+D+ R + A P + K DW + + E+ I +EGIFF+ SF AI +L+ L+ SN+LISRDE +H +C +Y+ K +RV G+ ++AVEIE F+ Sbjct: 32 PDPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFI 262
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_EBVG (Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr virus (strain GD1) GN=BaRF1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17 Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = 2 Query: 149 WTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLF-RAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER---VMGIVKEAVEIEREFV 754 W A + L++D + L + F + A ++ +V N+ + + + +Y Q A+EN+H E Y+ +L + A + K W + + + T E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ + K R + + + AVE+E F+ Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTLPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMTAKADRPRATWIQELFRTAVEVETAFI 229
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_EBVB9 (Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr virus (strain B95-8) GN=BaRF1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17 Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = 2 Query: 149 WTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLF-RAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER---VMGIVKEAVEIEREFV 754 W A + L++D + L + F + A ++ +V N+ + + + +Y Q A+EN+H E Y+ +L + A + K W + + + T E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ + K R + + + AVE+E F+ Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTLPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMTAKADRPRATWIQELFRTAVEVETAFI 229
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_EBVA8 (Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr virus (strain AG876) GN=BaRF1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17 Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = 2 Query: 149 WTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLF-RAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER---VMGIVKEAVEIEREFV 754 W A + L++D + L + F + A ++ +V N+ + + + +Y Q A+EN+H E Y+ +L + A + K W + + + T E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ + K R + + + AVE+E F+ Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTLPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMTAKADRPRATWIQELFRTAVEVETAFI 229
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_SHV21 (Ribonucleoside-diphosphate reductase small chain OS=Saimiriine herpesvirus 2 (strain 11) GN=60 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17 Identity = 57/216 (26.39%), Postives = 107/216 (49.54%), Query Frame = 2 Query: 119 EMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRA-FETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVMGIVKEAVEIEREFV 754 E+ ++ + W +V L D+ + L + F + ++ +V N+ + + + +Y Q+A+ENIH ++Y+ +L KN+ + + + +K W + + AE+++ F VEGIFF SF +I + RG+M G+ +N+ I+RDE LH A LLY+ + + SE+ + + +EAVE+E +F+ Sbjct: 18 ELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIED-LLSQFDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLRWLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLANDYIARDEMLHTSAAALLYNTMTKSSERPSEDWIYKLFREAVEVEFKFI 232 The following BLAST results are available for this feature:
BLAST of FC877997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877997 ID=FC877997; Name=FC877997; organism=Citrus clementina; type=EST; length=755bpback to top |