FC878007

Overview
NameFC878007
Unique NameFC878007
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length851
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC878007_ssr248 microsatellite FC878007_ssr248:248..257. BLAST: Citrus ESTs to Prunus persica proteins V1
FC878007_ssr194 microsatellite FC878007_ssr194:194..205. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig6419 contig Ccv1_Contig6419:14..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: CCPR2_MAGGR (Putative heme-binding peroxidase OS=Magnaporthe grisea GN=MGG_10368 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.139e-32
Identity = 77/169 (45.56%), Postives = 103/169 (60.95%), Query Frame = 1
Query:  361 ASDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHT 849
            AS P    + R+DI  LL           P+LVRL WH AGTYDK+ +     GG+N A +R+E E    ANAGL NA + ++P+K ++  +TYADL  LA   A+   GGP+IP + GR D +   + P  GRLP A     A H+R++FYRMG +D+EIVALSGAH+
Sbjct:    2 ASKPGDFDAVRKDIVSLLDQPEYDDGSAGPVLVRLAWHSAGTYDKSTDT----GGSNGAGMRYEAEGGDPANAGLQNARQFLEPVKARHPWITYADLRTLAGVVAVRAMGGPEIPWRAGRTDFADDSRVPPRGRLPDA--TQGAAHVRDIFYRMGFDDREIVALSGAHS 164          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 9.133e-32
Identity = 73/158 (46.20%), Postives = 95/158 (60.13%), Query Frame = 1
Query:  376 QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHT 849
            +++  R D+R L+ S  C PI++RL WHDAGTYD       + GGAN S+RF+ EL    N GL  A+   + +K K+  V+YADL+QLA   A+E  GGP IP   GR D        ++G LP   P   A HLR +F RMGL D++IVALSG HT
Sbjct:   12 EIEKTRRDLRALISSRNCAPIMLRLAWHDAGTYDAK----KKTGGANGSIRFKEELNRPHNKGLEKAVAFCEEVKAKHPRVSYADLYQLAGVVAVEVTGGPAIPFTPGRKDADS----ADDGELP--NPNEGASHLRTLFSRMGLLDRDIVALSGGHT 159          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: CCPR2_ASPFU (Putative heme-binding peroxidase OS=Aspergillus fumigatus GN=AFUA_6G13570 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.471e-31
Identity = 78/168 (46.43%), Postives = 98/168 (58.33%), Query Frame = 1
Query:  364 SDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHT 849
            S P    + R+DI   LK          P+ VRL WH AGTYD   +     GG+N A +R+E E    ANAGL +    ++P+K+K+  +TYADL+ LA   AIE  GGPK+  K GR D+    + P  GRLP A     AEHLR VFYRMG ND+EIVAL+G HT
Sbjct:    2 SKPGDYDAVRKDIIAQLKKPGYDDGSAGPVFVRLAWHSAGTYDLETDT----GGSNGAGMRYEAEGGDPANAGLQHGRAFLEPVKEKHPWITYADLWTLAGVVAIEALGGPKVVWKPGRTDLVDDSKVPPRGRLPDA--TQGAEHLRAVFYRMGFNDQEIVALAGGHT 163          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: CCPR2_GIBZE (Putative heme-binding peroxidase OS=Gibberella zeae GN=FG10606 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.722e-30
Identity = 77/174 (44.25%), Postives = 101/174 (58.05%), Query Frame = 1
Query:  343 PTTKCAASDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAH 846
            P +K   S P    + ++ I +LL           P+LVRL WH +GTYDK  +     GG+N A +R+E E    ANAGL NA   ++P+K  +  +TY+DL+ LA  TAI   GGP+I    GR D     + P  GRLP A     AEH+R++FYRMG ND+EIVALSGAH
Sbjct:    7 PQSKGQESTPGDFAAVQKSIIDLLNQPDYDDGSAGPVLVRLAWHSSGTYDKVTDT----GGSNGAGMRYEAEGGDPANAGLQNARVFLEPVKRLHPWITYSDLWTLAGVTAIHAMGGPEIDWLPGRTDFVDDSKLPPRGRLPDAA--QGAEHIRHIFYRMGFNDREIVALSGAH 174          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.938e-30
Identity = 71/165 (43.03%), Postives = 105/165 (63.64%), Query Frame = 1
Query:  358 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVF-YRMGLNDKEIVALSGAHT 849
            +A   + ++ AR+ +R L+    C P+++RL WH AGT+D +     + GG   +++   EL HAANAGL  A+++++PIK++   ++YAD +QLA   A+E +GGP +P   GR D   P   P EGRLP A   S  +HLR VF  +MGL+D++IVALSG HT
Sbjct:    9 SAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVS----SKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAP---PPEGRLPDATKGS--DHLRQVFGAQMGLSDQDIVALSGGHT 164          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.938e-30
Identity = 71/165 (43.03%), Postives = 105/165 (63.64%), Query Frame = 1
Query:  358 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVF-YRMGLNDKEIVALSGAHT 849
            +A   + ++ AR+ +R L+    C P+++RL WH AGT+D +     + GG   +++   EL HAANAGL  A+++++PIK++   ++YAD +QLA   A+E +GGP +P   GR D   P   P EGRLP A   S  +HLR VF  +MGL+D++IVALSG HT
Sbjct:    9 SAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVS----SKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAP---PPEGRLPDATKGS--DHLRQVFGAQMGLSDQDIVALSGGHT 164          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 3.837e-30
Identity = 72/157 (45.86%), Postives = 97/157 (61.78%), Query Frame = 1
Query:  379 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHT 849
            ++  +  +R L+    C PI++RL WH AGT+D       + GG   ++R   EL H AN GL  A++L+ PIK+ +  ++YAD +QLA   A+E  GGP+IP   GR+D   P   P EGRLP A      +HLR+VF RMGLNDK+IVALSG HT
Sbjct:   17 VQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKT----KTGGPFGTIRHPQELAHDANNGLDIAVRLLDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEP---PPEGRLPQA--TKGVDHLRDVFGRMGLNDKDIVALSGGHT 164          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: CCPR_USTMA (Cytochrome c peroxidase, mitochondrial OS=Ustilago maydis GN=CCP1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.545e-30
Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 1
Query:  433 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAH 846
            P+LVRL WH +GTYDKN       GG+N A++RF  E +H ANAGL  A   ++ I  K+  +TY+DL+ L    AI+E GGPKIP + GR D +  ++C  +GRLP  G   P +HLR +FY+MG ND+EIVALSGAH
Sbjct:  137 PVLVRLAWHASGTYDKN----SNTGGSNGATMRFAPESEHGANAGLGAARDFMEKIHQKFPWITYSDLWTLGGVAAIQELGGPKIPWRPGRKDATA-DKCTPDGRLP-DGDKGP-DHLRYIFYKMGFNDQEIVALSGAH 268          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: CCPR2_YARLI (Putative cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=YALI0D04268g PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.545e-30
Identity = 71/139 (51.08%), Postives = 88/139 (63.31%), Query Frame = 1
Query:  433 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAH 846
            P+LVRL WH +GTYDK        GG+N A++R+  E K  AN GL NA + ++PIK K+  +TYADL+ LA   AIEE  GPK+P K GR D       P  GRLP        +HLR++FYRMG ND+EIVAL GAH
Sbjct:   29 PVLVRLAWHASGTYDKATGT----GGSNGATMRYMKEAKDEANNGLENARQFLEPIKAKFPWITYADLWTLAGVVAIEEMDGPKVPWKPGRQDYVDETNVPPNGRLPDGA--QGQDHLRDIFYRMGFNDQEIVALCGAH 161          
BLAST of FC878007 vs. ExPASy Swiss-Prot
Match: CCPR2_EMENI (Putative heme-binding peroxidase OS=Emericella nidulans GN=AN5440 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.548e-30
Identity = 74/167 (44.31%), Postives = 95/167 (56.89%), Query Frame = 1
Query:  364 SDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAH 846
            S P    + R DI   LK          P+ VRL WH +GTYD   +     GG+N A +R+E E    ANAGL +    ++P+K+K+  +TY+DL+ LA   AIEE GGPKIP   GR D     + P  GRLP       A+HLR +FYRMG ND+EIVAL+G H
Sbjct:    2 SKPGDYNAVRRDIAAQLKKPGYDDGSAGPVFVRLAWHSSGTYDAASDT----GGSNGAGMRYEAEGGDPANAGLQHGRAFLEPVKEKHPWITYSDLWTLAGVVAIEEMGGPKIPWLPGRTDFVDDSKVPPRGRLPDGA--QGADHLRFIFYRMGFNDQEIVALAGGH 162          
The following BLAST results are available for this feature:
BLAST of FC878007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CCPR2_MAGGR3.139e-3245.56Putative heme-binding peroxidase OS=Magnaporthe gr... [more]
APX5_ARATH9.133e-3246.20L-ascorbate peroxidase 5, peroxisomal OS=Arabidops... [more]
CCPR2_ASPFU3.471e-3146.43Putative heme-binding peroxidase OS=Aspergillus fu... [more]
CCPR2_GIBZE1.722e-3044.25Putative heme-binding peroxidase OS=Gibberella zea... [more]
APX1_ORYSJ2.938e-3043.03L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI2.938e-3043.03L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ARATH3.837e-3045.86L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
CCPR_USTMA6.545e-3051.08Cytochrome c peroxidase, mitochondrial OS=Ustilago... [more]
CCPR2_YARLI6.545e-3051.08Putative cytochrome c peroxidase, mitochondrial OS... [more]
CCPR2_EMENI8.548e-3044.31Putative heme-binding peroxidase OS=Emericella nid... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878007 ID=FC878007; Name=FC878007; organism=Citrus clementina; type=EST; length=851bp
CGCGCGCGTGCTTGCCATTGGGCCTCGTAATCCAAAACAAAAGGAGCAAA
AAGCGAACGCTTGAAAAAGAACCAAATGGCAGCTCGGCCAGCGTCACTGA
CACAACAACAGATACGACTGCAATCAAAATCACAATCACCGATGGCTTCC
TCTTTGAGCACCGCCGCTTCTTCTCGCCTTCTTTGCTCCACCACCGCCGC
CGCCGCAGCTGCTAAGCTTTCTTTCTCTTCCGCTTCTTCACTCTCTTTCT
CTCTCTCCTCTTCTTCCTCCCTCAAATGCCTCAGATTCTCTCCTCTCATC
AGCCAGAGGAGATCGTCTGTGAACAGAGGATATAGCACCGTACCTACGAC
GAAATGTGCGGCGTCGGATCCTGATCAGTTGAAGAGTGCTAGAGAAGATA
TTAGGGAGCTTCTCAAGTCTACATTTTGCCATCCTATTTTGGTTCGTCTA
GGATGGCATGATGCTGGTACTTATGACAAGAACATTGAGGAGTGGCCTCG
AAGGGGAGGAGCTAATGCAAGTCTTAGATTTGAGGTTGAGCTAAAACACG
CAGCCAATGCTGGGCTTGTGAATGCATTGAAACTGATTCAACCTATCAAG
GACAAATATTCCGGTGTCACATATGCAGACTTATTCCAGTTGGCTAGCGC
TACTGCTATAGAGGAAGCCGGGGGTCCTAAGATCCCAATGAAGTATGGAA
GAGTGGATGTCTCAGGACCTGAGCAGTGCCCTGAAGAAGGAAGGCTTCCT
GCTGCTGGGCCTCCATCACCTGCTGAACATTTAAGAAATGTCTTTTATAG
AATGGGATTAAATGACAAGGAAATAGTTGCCTTATCTGGTGCACACACAG
T
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