FC878008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_SALHS (Tyrosyl-tRNA synthetase OS=Salmonella heidelberg (strain SL476) GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 92/208 (44.23%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++ L+ RGL+ +T ++ + + + + +YCGFDPTA+SLHLG+L+ ++ L F + GH+ VAL+GGAT +GDPS K+ ER +T+++ + IRK + G ++ + NNYDW+ + L FL+ +G+ + MI KE+VK+RL +QG+SFTEFSY LLQGYDF L + GV +QIGGSDQWG IT+G +L Sbjct: 5 NLIKQLQERGLVAQVTDEDALAERLA-QGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDL 211
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_SALG2 (Tyrosyl-tRNA synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 92/208 (44.23%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++ L+ RGL+ +T ++ + + + + +YCGFDPTA+SLHLG+L+ ++ L F + GH+ VAL+GGAT +GDPS K+ ER +T+++ + IRK + G ++ + NNYDW+ + L FL+ +G+ + MI KE+VK+RL +QG+SFTEFSY LLQGYDF L + GV +QIGGSDQWG IT+G +L Sbjct: 5 NLIKQLQERGLVAQVTDEDALAERLA-QGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDL 211
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_SALDC (Tyrosyl-tRNA synthetase OS=Salmonella dublin (strain CT_02021853) GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 92/208 (44.23%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++ L+ RGL+ +T ++ + + + + +YCGFDPTA+SLHLG+L+ ++ L F + GH+ VAL+GGAT +GDPS K+ ER +T+++ + IRK + G ++ + NNYDW+ + L FL+ +G+ + MI KE+VK+RL +QG+SFTEFSY LLQGYDF L + GV +QIGGSDQWG IT+G +L Sbjct: 5 NLIKQLQERGLVAQVTDEDALAERLA-QGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDL 211
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_SALCH (Tyrosyl-tRNA synthetase OS=Salmonella choleraesuis GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 92/208 (44.23%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++ L+ RGL+ +T ++ + + + + +YCGFDPTA+SLHLG+L+ ++ L F + GH+ VAL+GGAT +GDPS K+ ER +T+++ + IRK + G ++ + NNYDW+ + L FL+ +G+ + MI KE+VK+RL +QG+SFTEFSY LLQGYDF L + GV +QIGGSDQWG IT+G +L Sbjct: 5 NLIKQLQERGLVAQVTDEDALAERLA-QGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDL 211
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_SALAR (Tyrosyl-tRNA synthetase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 92/208 (44.23%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++ L+ RGL+ +T ++ + + + + +YCGFDPTA+SLHLG+L+ ++ L F + GH+ VAL+GGAT +GDPS K+ ER +T+++ + IRK + G ++ + NNYDW+ + L FL+ +G+ + MI KE+VK+RL +QG+SFTEFSY LLQGYDF L + GV +QIGGSDQWG IT+G +L Sbjct: 9 NLIKQLQERGLVAQVTDEDALAERLA-QGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDL 215
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_SALA4 (Tyrosyl-tRNA synthetase OS=Salmonella agona (strain SL483) GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 92/208 (44.23%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++ L+ RGL+ +T ++ + + + + +YCGFDPTA+SLHLG+L+ ++ L F + GH+ VAL+GGAT +GDPS K+ ER +T+++ + IRK + G ++ + NNYDW+ + L FL+ +G+ + MI KE+VK+RL +QG+SFTEFSY LLQGYDF L + GV +QIGGSDQWG IT+G +L Sbjct: 5 NLIKQLQERGLVAQVTDEDALAERLA-QGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDL 211
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_LISMO (Tyrosyl-tRNA synthetase OS=Listeria monocytogenes GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 91/207 (43.96%), Postives = 131/207 (63.29%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++D LE RG + T + LR EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ +R IF G+S ++NNYDW KD S LDFL+ G+ + TM++K+ V RL E G+SFTEF+YQ+LQ DF +L++ +QIGGSDQWG ITAG +L Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWVE--EKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFEGNSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDL 204
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_LISMH (Tyrosyl-tRNA synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 91/207 (43.96%), Postives = 131/207 (63.29%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++D LE RG + T + LR +EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ +R IF G S ++NNYDW KD S LDFL+ G+ + TM++K+ V RL E G+SFTEF+YQ+LQ DF +L++ +QIGGSDQWG ITAG +L Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWV--DEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFEGDSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDL 204
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_LISMF (Tyrosyl-tRNA synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 91/207 (43.96%), Postives = 131/207 (63.29%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++D LE RG + T + LR EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ +R IF G+S ++NNYDW KD S LDFL+ G+ + TM++K+ V RL E G+SFTEF+YQ+LQ DF +L++ +QIGGSDQWG ITAG +L Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWVE--EKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFEGNSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDL 204
BLAST of FC878008 vs. ExPASy Swiss-Prot
Match: SYY_LISMC (Tyrosyl-tRNA synthetase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=tyrS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44 Identity = 91/207 (43.96%), Postives = 131/207 (63.29%), Query Frame = 1 Query: 217 NVVDTLERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIRKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDFLYLFQNKGVNVQIGGSDQWGYITAGTEL 825 N++D LE RG + T + LR EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ +R IF G+S ++NNYDW KD S LDFL+ G+ + TM++K+ V RL E G+SFTEF+YQ+LQ DF +L++ +QIGGSDQWG ITAG +L Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWVE--EKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFEGNSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDL 204 The following BLAST results are available for this feature:
BLAST of FC878008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878008 ID=FC878008; Name=FC878008; organism=Citrus clementina; type=EST; length=825bpback to top |