FC878010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878010 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.229e-12 Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 72 AFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYR-PIASIAFHAEGELLAVAS 362 A+S D L S D T+KI D +G CLK L GH + F+P +S ++ SGS D VR+WD T +C+ + + P++++ F+ +G L+ +S Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 190
BLAST of FC878010 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.611e-11 Identity = 35/98 (35.71%), Postives = 55/98 (56.12%), Query Frame = 3 Query: 72 AFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYR-PIASIAFHAEGELLAVAS 362 A+S D + + S D T+KI D ++G +K L GH+ + V F+P +S ++ SGS D VR+WD NT EC + P+ + F+ +G L+ S Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP-QSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGS 191
BLAST of FC878010 vs. ExPASy Swiss-Prot
Match: UTP13_SCHPO (Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe GN=utp13 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.611e-11 Identity = 39/118 (33.05%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 54 RSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYR-PIASIAFHAEG-ELLAVASGHKLYIWPYNNKE 401 R A S DGR +AS D T+K+ D TG + VL GHRR W F+P S LASGS D +R+W+ +T +C+ + + + I + + ++G ++++ A+ + +W ++ E Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPF-SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
BLAST of FC878010 vs. ExPASy Swiss-Prot
Match: PF20_CHLRE (Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.686e-11 Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 3 Query: 75 FSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC-IGSCDFYRPIASIAFHAEGELLAVASGHK-LYIW 383 F P G LAS GD VKI D + C+ + H++ W VRFH L E++ASGSLDH VRLWD +C + + +A+ LA AS K + +W Sbjct: 376 FHPAGTCLASGGGDSAVKIWDFEKQRCVTTFTDHKQAIWSVRFHHL-GEVVASGSLDHTVRLWDLPAGKCRMALRGHVDSVNDLAWQPFSSSLATASSDKTVSVW 479
BLAST of FC878010 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 72 AFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYR-PIASIAFHAEGELLAVAS 362 A+S D R L S D T+K+ + TG LK L GH + F+P +S ++ SGS D VR+WD T +C+ + + P++++ F+ +G L+ +S Sbjct: 121 AWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 217
BLAST of FC878010 vs. ExPASy Swiss-Prot
Match: PKWA_THECU (Probable serine/threonine-protein kinase pkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 50/121 (41.32%), Postives = 63/121 (52.07%), Query Frame = 3 Query: 39 LVPPPRSTIAAAFSPDGRTLASTHG-DHTVKIIDCQTGNCLKVLSGHRRTPWV--VRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFY-RPIASIAFHAEGELLAVAS-GHKLYIWP 386 L P + ++ AFSPDG L HG D TV + D +G L GH T WV V F P +LASGS D +RLWD E + + + P+ S+AFH EG LA AS + IWP Sbjct: 623 LQAPAENVVSLAFSPDGSML--VHGSDSTVHLWDVASGEALHTFEGH--TDWVRAVAFSP-DGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWP 738
BLAST of FC878010 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.993e-11 Identity = 34/98 (34.69%), Postives = 54/98 (55.10%), Query Frame = 3 Query: 72 AFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYR-PIASIAFHAEGELLAVAS 362 A+S D L S D T+K+ D ++G CLK L GH + F+P S ++ SGS D V++W+ T +C+ + + PI+++ FH G L+ S Sbjct: 88 AWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNP-PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGS 184 The following BLAST results are available for this feature:
BLAST of FC878010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878010 ID=FC878010; Name=FC878010; organism=Citrus clementina; type=EST; length=945bpback to top |