FC878013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: MCFC_DICDI (Mitochondrial substrate carrier family protein C OS=Dictyostelium discoideum GN=mcfC PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.607e-22 Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 532 SDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIG--EQAVIPEGISKHVQRSK------YFIAGGIAGAASRTATAPLDRLKVVLQVQTAL-ARLVPTIRKIWKEEGFLGFFRGN 909 S++EL R +DK+ + I F EWR+ L+L P+ + ++ I W+ ++D G IP + K + S Y +AG +AG ASRT+TAPL+R+K++ Q+ L+ + +K+ G GFFRGN Sbjct: 111 SEQELIRLFHRIDKNRDNQIDFNEWRELLVLLPN-SNLQLIISFWKDSQILDAGFDNGGFIPPMVEKKEKASSLRNTITYMLAGSVAGFASRTSTAPLERVKIMCQLNHGKPISLISAFKACYKDGGIKGFFRGN 244 HSP 2 Score: 46.2098 bits (108), Expect = 1.607e-22 Identity = 24/94 (25.53%), Postives = 48/94 (51.06%), Query Frame = 2 Query: 221 IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVK 502 ++ LF+ D N+G L +I+ G L+IP+ K + D ++DG V ++EF + +L +F+ +D +G + E+ +++ K Sbjct: 11 VKKLFDSLDKDNNGKLTREEIKEGFFKLRIPSSEKDIESFLTNVDKDKDGSVSFKEFEDFTIENIKKLKIVFEELDTNKSGTLDIHEIEESIKK 104
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: SCMC2_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Mus musculus GN=Slc25a25 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.539e-22 Identity = 48/138 (34.78%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTALAR---LVPTIRKIWKEEGFLGFFRGNG 912 G++IS+++ + ++ +DK+ I + EWRD+ LL+P E I I +W+ + D+GE +P+ + +++ ++ +AGG AGA SRT TAPLDRLKV++QV + + +V ++ +E G +RGNG Sbjct: 111 GVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVE-NIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIVGGFTQMIREGGAKSLWRGNG 247 HSP 2 Score: 36.5798 bits (83), Expect = 3.539e-22 Identity = 15/58 (25.86%), Postives = 37/58 (63.79%), Query Frame = 2 Query: 323 KYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 496 ++ + + + D + DG++D++EF Y+ E +L +F+++D +++G I +E+ +L Sbjct: 50 QWKQKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSL 107
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: SCMC2_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.539e-22 Identity = 48/138 (34.78%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTALAR---LVPTIRKIWKEEGFLGFFRGNG 912 G++IS+++ + ++ +DK+ I + EWRD+ LL+P E I I +W+ + D+GE +P+ + +++ ++ +AGG AGA SRT TAPLDRLKV++QV + + +V ++ +E G +RGNG Sbjct: 111 GVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVE-NIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNG 247 HSP 2 Score: 36.5798 bits (83), Expect = 3.539e-22 Identity = 15/58 (25.86%), Postives = 37/58 (63.79%), Query Frame = 2 Query: 323 KYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 496 ++ + + + D + DG++D++EF Y+ E +L +F+++D +++G I +E+ +L Sbjct: 50 QWKQKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSL 107
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: SCMC2_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.539e-22 Identity = 48/138 (34.78%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTALAR---LVPTIRKIWKEEGFLGFFRGNG 912 G++IS+++ + ++ +DK+ I + EWRD+ LL+P E I I +W+ + D+GE +P+ + +++ ++ +AGG AGA SRT TAPLDRLKV++QV + + +V ++ +E G +RGNG Sbjct: 111 GVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVE-NIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIVGGFTQMIREGGARSLWRGNG 247 HSP 2 Score: 36.5798 bits (83), Expect = 3.539e-22 Identity = 15/58 (25.86%), Postives = 37/58 (63.79%), Query Frame = 2 Query: 323 KYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 496 ++ + + + D + DG++D++EF Y+ E +L +F+++D +++G I +E+ +L Sbjct: 50 QWKQKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSL 107
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: SCMC2_RAT (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus GN=Slc25a25 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.604e-22 Identity = 47/138 (34.06%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTALAR---LVPTIRKIWKEEGFLGFFRGNG 912 G++IS+++ + ++ +DK+ I + EWRD+ LL+P E I I +W+ + D+GE +P+ + +++ ++ +AGG AGA SRT TAPLDRLKV++QV + + ++ ++ +E G +RGNG Sbjct: 111 GVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVE-NIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGAKSLWRGNG 247 HSP 2 Score: 36.5798 bits (83), Expect = 4.604e-22 Identity = 15/58 (25.86%), Postives = 37/58 (63.79%), Query Frame = 2 Query: 323 KYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 496 ++ + + + D + DG++D++EF Y+ E +L +F+++D +++G I +E+ +L Sbjct: 50 QWKQKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSL 107
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: CMC3_CAEBR (Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.087e-20 Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQV---QTALARLVPTIRKIWKEEGFLGFFRGNG 912 G+ + D + V+ +D+ + + E++DF+LLYP + + W ++DIGE +PE + +S ++ +AGG+AGA SRT TAP DR+KV LQV +T +V + + E G F+RGNG Sbjct: 170 GVNLDDHKALSIVKKMDQSGSSSVNLNEFQDFMLLYP-STDMREMVDFWRHNLIIDIGEDGQVPEDFTPQELQSGVWWRHLVAGGVAGAMSRTCTAPFDRIKVYLQVNSTKTNKLGVVSCVHLLHAEGGLKSFWRGNG 306 HSP 2 Score: 31.5722 bits (70), Expect = 3.087e-20 Identity = 28/102 (27.45%), Postives = 42/102 (41.18%), Query Frame = 2 Query: 206 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSAL--QIPA----------------QYKYAK-------------DLFKVCDANRDGRVDYQEFRRYMDIKEM 418 E++ +IR +++ DA N G +D + LS+ IPA + YA ++F D+NRDG VD E + Y KEM Sbjct: 70 EKEKKIREMYDRLDADNDGSIDIRDLTQALSSQTPHIPATMAPKLLAKMKREDSDRVTYADFTNYVIAHEARLAEVFDQIDSNRDGEVDVSEIKSY--CKEM 169
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: SCMC3_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18 Identity = 51/138 (36.96%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTALA---RLVPTIRKIWKEEGFLGFFRGNG 912 GI IS E+ + + +D+D I ++EWRD LL+ E +E++ + W+ ++DIGE +P+ S+ + + K +AG +AGA SRT TAPLDRLKV +QV + + ++ +R + +E G L +RGNG Sbjct: 109 GISISLEQAEKILHSMDRDGTMTIDWQEWRDHFLLHSLE-NVEDVLYFWKHSTVLDIGECLTVPDEFSQEEKLTGMWWKQLVAGAVAGAVSRTGTAPLDRLKVFMQVHASKSNRLNILGGLRNMIQEGGVLSLWRGNG 245
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.954e-18 Identity = 52/138 (37.68%), Postives = 80/138 (57.97%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQV---QTALARLVPTIRKIWKEEGFLGFFRGNG 912 GI IS E+ + + +D+D I ++EWRD LL+ E +E++ + W+ ++DIGE +P+ SK + + K +AG +AGA SRT TAPLDRLKV +QV +T ++ +R + E G +RGNG Sbjct: 110 GISISLEQAEKILHSMDRDGTMTIDWQEWRDHFLLHSLE-NVEDVLYFWKHSTVLDIGECLTVPDEFSKQEKLTGMWWKQLVAGAVAGAVSRTGTAPLDRLKVFMQVHASKTNRLNILGGLRSMVLEGGIRSLWRGNG 246
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.698e-18 Identity = 46/138 (33.33%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEG--ISKHVQRS--KYFIAGGIAGAASRTATAPLDRLKVVLQVQTALAR---LVPTIRKIWKEEGFLGFFRGNG 912 G+ IS ++ + ++ +DK+ I + EW+ + L P E I I +W+ + D+GE ++P+ + +H+ ++ ++GG AGA SRT TAPLDRLKV++QV + L+ + ++ KE G +RGNG Sbjct: 111 GVHISLKQAEKVLKSMDKNGTMTIDWNEWKKYPTLQPAE-NIPEIILYWKHSTIFDVGESLMVPDEFTVEEHLTGMWWRHLVSGGGAGAVSRTCTAPLDRLKVLMQVHGCQGKSMCLMSGLTQMIKEGGVRSLWRGNG 247 HSP 2 Score: 31.9574 bits (71), Expect = 7.698e-18 Identity = 14/58 (24.14%), Postives = 33/58 (56.90%), Query Frame = 2 Query: 323 KYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 496 ++ K K + DG++D++EF Y+ E +L +F+++D + G + ++ ++L Sbjct: 50 RWRKKSLKTEEKEHDGQLDFEEFVHYLQDHEKDLKLVFKSMDRKIAGQVNANDIVNSL 107
BLAST of FC878013 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.882e-17 Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 520 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQV---QTALARLVPTIRKIWKEEGFLGFFRGNG 912 GI +SD++ + + +D D + + EWR+ L P E ++ I +W++ ++DIG+ IP+ ++ + + K AGG+AGA SRT TAPLDR+KV +QV +T LV +++ KE G +RGNG Sbjct: 120 GINLSDKDAEKILHSIDVDGTMTLDWNEWREHFLFNPAE-DLQQIIRYWKKSTVLDIGDSLTIPDEFTEEEKTTGMWWKQLAAGGVAGAVSRTGTAPLDRMKVFMQVHSSKTNKISLVNGFKQMIKEGGVASLWRGNG 256 The following BLAST results are available for this feature:
BLAST of FC878013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878013 ID=FC878013; Name=FC878013; organism=Citrus clementina; type=EST; length=912bpback to top |