FC878014

Overview
NameFC878014
Unique NameFC878014
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 1.149e-72
Identity = 141/267 (52.81%), Postives = 179/267 (67.04%), Query Frame = 2
Query:  128 FLVQILFICIIFYLGSA---------------FSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEK-AINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYE 877
            F V +LF+ + F LGS                F +  +A Q+ DRV +LPGQ   V F  Y+GYVTVNE  GRALFYWF EA ++P  KP++LWLNGGPGCSSI +G AEE+GPF  +   +  L LNPYSWN+ AN+LFL+SPVGVGFSY+NTS DI   GD  TA DS  FL+ W +RF Q+K  DFYI+GESY GHYVPQLS+ I + N+   +K  INLKG M+GNAL DD  D  G+ ++ W   +ISD  Y+++N  CD++
Sbjct:    8 FSVLVLFL-VSFLLGSTSAEKLCSDNDGDNGCFRSRVLAAQRADRVKELPGQP-PVKFRQYAGYVTVNETHGRALFYWFFEATQNPSKKPVLLWLNGGPGCSSIGFGAAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFYIAGESYAGHYVPQLSELIYKENKIASKKDFINLKGLMIGNALLDDETDQKGMIEYAWDHAVISDALYEKVNKNCDFK 272          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.368e-72
Identity = 127/230 (55.22%), Postives = 169/230 (73.48%), Query Frame = 2
Query:  200 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAV--EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF 883
            +++ DRV  LPG    V+FA Y+GYVTV+  +GRALFY+  EAV      +KPL+LWLNGGPGCSS+ YG  EE+GPF +  DGKTLY NPYSWN  AN+LFL+SP GVG+SYSNT++D   +GD  TAED+ +FL  WLERF ++KGR+FYI+GESY GHYVPQL+ AI+RH        INLKG M+GNA+ +D+ D  G++ F+W+  LISD+T   ++  C++ ++
Sbjct:   80 RKEADRVEALPGHPRGVDFAQYAGYVTVDAAAGRALFYYLAEAVGGNGDKTKPLLLWLNGGPGCSSLGYGAMEELGPFRVMSDGKTLYSNPYSWNHAANVLFLESPAGVGYSYSNTTADYGRSGDNGTAEDAYQFLDNWLERFPEYKGREFYITGESYAGHYVPQLAHAILRH----ASPDINLKGIMIGNAVINDWTDSKGMYDFFWTHALISDETADGISKNCNFTAY 305          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 5.705e-72
Identity = 131/245 (53.47%), Postives = 171/245 (69.80%), Query Frame = 2
Query:  143 LFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA-TGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDY 874
            L I ++    ++ S+  + +Q+ D +  LPGQ   V F+ +SGYVTVNE  GR+LFYW  E+     +KPL+LWLNGGPGCSSI YG +EEIGPF I   G  LYLN ++WN  ANILFL+SP GVGFSY+NTSSD+  +GD+RTA+++L FL+KW+ RF Q++ RDFYI GESY GHYVPQL+K I  +N+A      INLKG+MVGN   D ++D LG   + WS  +ISD TYK +   C +
Sbjct:    6 LIIILLVISSTSSSSSSLREQEEDMIKALPGQP-QVGFSQFSGYVTVNESHGRSLFYWLTESPSSSHTKPLLLWLNGGPGCSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIFLIKWMSRFPQYQYRDFYIVGESYAGHYVPQLAKKIHLYNKAFNNTPIINLKGFMVGNGDMDKHYDRLGAAMYAWSHAMISDKTYKSILKHCSF 249          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 1.189e-69
Identity = 122/226 (53.98%), Postives = 167/226 (73.89%), Query Frame = 2
Query:  203 QKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYES 880
            +K D + +LPGQ   V+F  Y GYVTVNE +GR+ FY+FVEA +  DS PL+LWLNGGPGCSS+AYG  +E+GPF +  DGKTL+ N Y+WN  AN+LFL+SP GVGFSY+NT+SD+  +GD+ TA D+  FL+ WLERF ++KGRD YI+GESY GHYVPQL+  I+ H+++      NLKG ++GNA+ +D  D +G++ F+ S  LIS+D+  +L   CD ++
Sbjct:   77 RKRDLIRRLPGQP-PVSFDQYGGYVTVNESAGRSFFYYFVEASKSKDSSPLLLWLNGGPGCSSLAYGALQELGPFRVHSDGKTLFRNRYAWNNAANVLFLESPAGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYKGRDLYIAGESYAGHYVPQLAHTILLHHRS----FFNLKGILIGNAVINDETDLMGMYDFFESHALISEDSLARLKSNCDLKT 297          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.216e-67
Identity = 122/249 (49.00%), Postives = 166/249 (66.67%), Query Frame = 2
Query:  140 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAV-EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKA-INLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYES 880
            +L I ++  L        +  Q  D+V  LP Q  N   +H+SGYV VN+E+ R+LF+WF EA+ E P ++PLVLWLNGGPGCSSI YG A E+GPF +  +G +L  N YSW Q AN+LFL+SPVGVGFSY+N+SSD+    D   AED+  F++ W  R+ Q+K RDF+I+GESY GHY PQL++ I   N+   + + INLKG++VGN LTDD +D  G+ ++ WS  +ISD  Y      CD++S
Sbjct:    7 LLIISLLILLSLLHQDYHIEAQNSDKVVNLPEQPLNPKISHFSGYVNVNQENTRSLFFWFFEALSESPSTRPLVLWLNGGPGCSSIGYGAASELGPFRVVENGTSLSFNQYSWVQEANMLFLESPVGVGFSYTNSSSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFFIAGESYAGHYSPQLAELIYDRNKVQPKDSFINLKGFIVGNPLTDDEYDNKGILEYAWSHAVISDHLYDSAKHNCDFKS 255          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.581e-66
Identity = 122/215 (56.74%), Postives = 157/215 (73.02%), Query Frame = 2
Query:  200 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDT 844
            Q++ D +  LPGQ  +V+F  Y GYVTVNE +GR+L+Y+FVEA +   S PLVLWLNGGPGCSS+ YG  +E+GPF I  DGKTLY NPYSWN VANILFL+SPVG GFSY+NT SD+   GD + A D   FL+KWLERF ++KGR+FYI+GESY GHYVPQL++ I+ HN+   +  INL+G ++GN   +D  +  G F +  S  L+S D+
Sbjct:   74 QKERDLIENLPGQP-SVSFRQYGGYVTVNESAGRSLYYYFVEATKTKKSLPLVLWLNGGPGCSSL-YGAFQELGPFRIYGDGKTLYTNPYSWNNVANILFLESPVGTGFSYTNTESDLENPGDMKAAADKYIFLVKWLERFPEYKGREFYIAGESYAGHYVPQLAQTILVHNK--NQNFINLRGILIGNPTLNDIVETTGSFDYLVSHALLSQDS 284          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.581e-66
Identity = 126/248 (50.81%), Postives = 163/248 (65.73%), Query Frame = 2
Query:  143 LFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKA--INLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYES 880
            L++C +F    AF +    +   D V   PGQ   V+F HY+GYVTVN  SGRALFYWF EA+  P+ KPLVLWLNGGPGCSS+ YG  +EIGPF +   G +L  NPY+WN+ ANILFL+SP GVGFSYSNTSSD    GD  TA DS  FL KW  RF  +K +DF+I+GESY G YVP+L++ I   N+     +  INLKG ++GN LT    D+ G   + W+  ++SD+TY+ +   C++ S
Sbjct:   11 LYLCTLF----AFVSSDSPEAMRDLVTNFPGQP-KVSFRHYAGYVTVNIISGRALFYWFFEAMTHPNVKPLVLWLNGGPGCSSVGYGATQEIGPFLVDNKGNSLKFNPYAWNKEANILFLESPAGVGFSYSNTSSDYRKLGDDFTARDSYTFLQKWFLRFPAYKEKDFFIAGESYAGKYVPELAEVIYDKNKDNENLSLHINLKGILLGNPLTSYAEDWTGWVDYAWNHAVVSDETYRVIKQSCNFSS 253          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.753e-64
Identity = 117/224 (52.23%), Postives = 159/224 (70.98%), Query Frame = 2
Query:  212 DRVGKLPGQNFNVNFAHYSGYVTVN-EESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII-RHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYE 877
            D V  LPGQ   VNF HY+GYV +  E+  +ALFYWF EA ++   +PLVLWLNGGPGCSSIAYG A+E+GPF +  +G  L  N +SWN+ AN+LFL++PVGVGFSY+N S D+   GD+ TA DSL FL+ W  +F +F+  +FYISGESY GHYVPQL++ I  R+ + T + +INLKG+M+GNA+ ++  D  GL  + WS  +ISD+ +  ++  C +E
Sbjct:   38 DLVTGLPGQP-PVNFKHYAGYVNLGPEQKQKALFYWFFEAQQNSSRRPLVLWLNGGPGCSSIAYGAAQELGPFLVHDNGGKLTYNHFSWNKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFYISGESYAGHYVPQLAEVIYDRNKKVTKDSSINLKGFMIGNAVINEATDMAGLVDYAWSHAIISDEVHTSIHGSCSFE 260          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.274e-63
Identity = 117/227 (51.54%), Postives = 154/227 (67.84%), Query Frame = 2
Query:  212 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKA----INLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYES 880
            D V  LPGQ  +V+F HY+GYV V+E +GRA+FYWF EA++ P  KPLVLWLNGGPGCSS+ YG  +EIGPF +  +G  L  NPY+WN+ AN+LFL+SPVGVGFSYSNTSSD    GD  TA D+  FL  W E+F + K   FYI+GESY G YVP+L++ +  +N    +      INLKG ++GN  T D  D+ G   + WS  +ISD+T++ +   C++ S
Sbjct:   49 DLVTGLPGQP-DVSFRHYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGNGLNFNPYAWNKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFYIAGESYAGKYVPELAEVVYDNNNNNKKNGSSFHINLKGILLGNPETSDAEDWRGWVDYAWSHAVISDETHRIITRTCNFSS 274          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 4.840e-63
Identity = 114/228 (50.00%), Postives = 158/228 (69.30%), Query Frame = 2
Query:  203 QKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKA--INLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYES 880
            ++ D V  LPGQ  +V+F HY+GYV V++ +GRALFYWF EA++ P  KPLVLWLNGGPGCSS+ YG  +EIGPF    + K L  NPY+WN+  N+LFL+SPVGVGFSYSNTSSD     D    +D+  FL  W E+F + KG +FYI+GESY G YVP+L++ +  +N+   + +  INLKG+++GN    +  D+ G   + WS  +ISD+T++ +N LC++ S
Sbjct:   40 KEADLVTNLPGQP-DVSFKHYAGYVPVDKSNGRALFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLADTNEKGLIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKGNEFYIAGESYAGIYVPELAELVYDNNEKNNDLSLHINLKGFLLGNPDISNPDDWRGWVDYAWSHAVISDETHRNINRLCNFSS 266          
The following BLAST results are available for this feature:
BLAST of FC878014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
SCP34_ARATH1.149e-7252.81Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
CBP23_HORVU4.368e-7255.22Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
SCP23_ARATH5.705e-7253.47Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP40_ARATH1.189e-6953.98Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
SCP33_ARATH7.216e-6749.00Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP39_ARATH3.581e-6656.74Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP32_ARATH3.581e-6650.81Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
SCP35_ARATH9.753e-6452.23Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP31_ARATH1.274e-6351.54Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP30_ARATH4.840e-6350.00Putative serine carboxypeptidase-like 30 OS=Arabid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA8CB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA8CB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878014 ID=FC878014; Name=FC878014; organism=Citrus clementina; type=EST; length=890bp
AAAAAAATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATT
ATGTCTTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAA
ATGGCTTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCAT
TTGCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCC
AGCAAAAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTC
AACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAG
GGCTCTCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGC
CTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTAT
GGAGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGAC
CTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTC
TTGATTCCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGAT
ATTACGACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTT
ACTAAAGTGGTTAGAACGGTTTTCACAATTTAAAGGAAGGGATTTCTACA
TCTCCGGGGAGAGTTATGGAGGGCATTATGTTCCTCAGTTAAGCAAAGCA
ATCATAAGGCACAACCAAGCAACTGGGGAAAAAGCAATTAATCTGAAGGG
CTACATGGTGGGAAATGCTCTAACTGATGATTACCACGATTACTTGGGCC
TTTTCCAGTTTTGGTGGTCAGCTGGTTTGATATCTGATGATACGTACAAG
CAACTAAACCTTCTATGTGATTATGAGTCCTTTGTCCCCC
back to top