FC878014

Overview
NameFC878014
Unique NameFC878014
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:164..1051. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 6.322e-63
Identity = 117/230 (50.87%), Postives = 159/230 (69.13%), Query Frame = 2
Query:  200 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEA-VEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFV 886
            QQ+ DR+  LPGQ   V F  Y GYVT+++ +GRAL+YWF EA   DP + PLVLWLNGGPGCSSI  G  +E+GPF +  +G++L LN Y+WN+ ANILF +SP GV FSYSNTSSD++  GD + A+D+  FL+KW ERF  +  R+FYI+GES  GH++PQLS+ + R+        IN +G +V + LT+D+ D +G+F+ WW  GLISD+T      +C   SF+
Sbjct:   59 QQEDDRIPGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFRVHTNGESLLLNEYAWNKAANILFAESPAGVVFSYSNTSSDLSM-GDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES--GHFIPQLSQVVYRNR--NNSPFINFQGLLVSSGLTNDHEDMIGMFELWWHHGLISDETRDSGLKVCPGTSFM 283          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.034e-61
Identity = 116/225 (51.56%), Postives = 157/225 (69.78%), Query Frame = 2
Query:  212 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHN-QATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF 883
            D V KLPGQ   V F  ++GYV ++ ++GR+LFY+FVEA + P SKPL LWLNGGPGCSSI  G   E+GPF+   D + L  NP SWN+ +N+LF+DSP GVG+SYSNT+SD TT GD+ TA+D L F+L+WLE+F QFK R+ +++GESY GHYVPQL+  I+ +N Q +     NLKG  +GN L     D   +++F+WS G+ISD+    +   CD+E +
Sbjct:   36 DLVTKLPGQP-EVAFRQFAGYVDIDVKAGRSLFYYFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDARGLRRNPKSWNKASNLLFVDSPAGVGWSYSNTTSDYTT-GDESTAKDMLVFMLRWLEKFPQFKTRNLFLAGESYAGHYVPQLADVILEYNAQRSNRFKFNLKGIAIGNPLLKLDRDVPAIYEFFWSHGMISDELGLTIMNQCDFEDY 258          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.656e-61
Identity = 109/221 (49.32%), Postives = 152/221 (68.78%), Query Frame = 2
Query:  212 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDY 874
            D V +LPGQ  NV F  ++GYV V+ E+GR+LFY++VEAV++PD+KPL LWLNGGPGCSS+  G   E+GPF+   DG+ L LN  SWN+ +N+LF++SP GVG+SYSN SSD  T GDK T  D L FLL+W  +F + K RD +++GESY GHY+PQL+  I+ +N  +     N+KG  +GN L     D+   ++++WS G+ISD+    +   CD+
Sbjct:   30 DLVARLPGQP-NVGFRQFAGYVDVDSENGRSLFYYYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGDGRGLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYNT-GDKSTVNDMLVFLLRWFNKFPELKSRDLFLTGESYAGHYIPQLADVILSYNSRSSGFKFNVKGIAIGNPLLKLDRDFAAAYEYFWSHGMISDEVRLTIMNQCDF 248          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.530e-61
Identity = 112/224 (50.00%), Postives = 154/224 (68.75%), Query Frame = 2
Query:  212 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF 883
            D V +LPGQ   V F  Y+GYV V+ ++GR+LFY++VEAV+ PDSKPL LWLNGGPGCSSI  G   E+GPF+   DG+ L +N  SWN+ +++LF++SP GVG+SYSN SSD  T GDK TA D L FLL+W E+F + K RD +++GESY GHY+PQL+ AI+ +N  +     N+KG  +GN L     D    ++F+WS G+ISD+    +   CD++ +
Sbjct:   31 DLVVRLPGQP-TVGFKQYAGYVDVDVKAGRSLFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYNT-GDKSTANDMLVFLLRWFEKFPKLKSRDLFLTGESYAGHYIPQLADAILSYNSHSSGFKFNIKGVAIGNPLLKLDRDSPATYEFFWSHGMISDELKLTITSQCDFDDY 252          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.009e-60
Identity = 114/243 (46.91%), Postives = 158/243 (65.02%), Query Frame = 2
Query:  164 YLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNG---DKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF 883
            +  S    + ++ ++ D + KLPGQ   ++F  Y GYV VNE + R L+Y+FVEA++   S PLVLW NGGPGCSS+ +G  EE+GPF +  DGKTLY NPYSWN  AN+LF + P+ VGFSYS+T  D    G   DK TAED+  FL+ WLERF ++KGRD YISG+SY GHY+PQL++ I+  N  T    INL+G  +GN   D   +     +F  S GL+S   +++ + +CD+ ++
Sbjct:   46 HFNSVSRENVLSLKEKDLIEKLPGQPSGISFRQYGGYVAVNEPATRFLYYYFVEAIKPSKSTPLVLWFNGGPGCSSVGFGAFEELGPFRVHSDGKTLYRNPYSWNNEANMLFFEGPISVGFSYSSTPFDWEIFGEQADKLTAEDNYMFLVNWLERFPEYKGRDVYISGQSYAGHYIPQLAQIILHRNNQT---FINLRGISIGNPGLDLLIEADNENKFILSHGLVSQKDFEEYSKVCDFANY 285          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.240e-59
Identity = 112/220 (50.91%), Postives = 151/220 (68.64%), Query Frame = 2
Query:  212 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGN-ALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLC 868
            D + +LPGQ  +V F  Y GYV VN+ +GR L+Y+FVE ++  ++ PLV+W NGGPGCSS+  G  +E+GPF +  DGKTL+ NPYSWN  AN+LFL++PVG GFSYSN+  +    GDK TAED+  FL+ WLERF ++KGRD YI+G+SY GHYVPQL++ I+  N  T    INL+G ++GN +L  +  D  G ++F +S GLIS       N  C
Sbjct:   62 DLIQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFNGGPGCSSLG-GAFKELGPFRVHSDGKTLFRNPYSWNNEANVLFLETPVGTGFSYSNSPIN-GKQGDKATAEDNYMFLVNWLERFPEYKGRDIYIAGQSYAGHYVPQLAQIILHRNNQT---LINLRGILIGNPSLNREIQDDFG-YKFMFSHGLISQQQMDNYNKFC 275          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.447e-59
Identity = 114/227 (50.22%), Postives = 150/227 (66.08%), Query Frame = 2
Query:  206 KLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFV 886
            + DR+ +LPGQ   V F  YSGYVT++E+  RALFY+  EA   P SKPLVLWLNGGPGCSS+  G   E GPF  +P G  L  N +SWNQ AN+L+L++PVGVGFSY+N SS      DK TA+D+L FL KW  +F Q+  R  +I+GESY GHYVPQL++ +I++N+       NLKG  +GN + +   D+    +++WS GLISD TYK     C+Y  F+
Sbjct:   30 RADRITRLPGQP-RVGFQQYSGYVTIDEKKQRALFYYLAEAETKPISKPLVLWLNGGPGCSSLGVGAFSENGPF--RPKGSILVRNQHSWNQEANMLYLETPVGVGFSYANESSSYEGVNDKITAKDNLVFLQKWFLKFPQYLNRSLFITGESYAGHYVPQLAQLMIQYNKK--HNLFNLKGIAIGNPVMEFATDFNSRAEYFWSHGLISDPTYKLFTSSCNYSRFL 251          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.104e-58
Identity = 118/249 (47.39%), Postives = 156/249 (62.65%), Query Frame = 2
Query:  140 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFV 886
            I F  IIF+   + +         DRV +LPGQ   V F  YSGYVTV+++  RALFY+F EA  +P SKPLVLWLNGGPGCSS+  G   E GPF  +P G  L  N +SWNQ AN+L+L++PVGVGFSYS  SS      DK TA D+L FL +W  +F  +  R  +I+GESY GHYVPQL++ +I++N+       NL+G  +GN + +   D+    +++WS GLISD TYK     C+Y  +V
Sbjct:    9 ISFALIIFH---SLTVSSSVLSHSDRVTRLPGQP-RVGFQQYSGYVTVDDKKQRALFYYFAEAETNPSSKPLVLWLNGGPGCSSLGVGAFSENGPF--RPKGPILVKNQHSWNQEANMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQRWFLKFPHYLNRSLFITGESYAGHYVPQLAELMIQYNKK--HHLFNLRGIAIGNPVLEFATDFNSRAEYFWSHGLISDSTYKMFTSYCNYSRYV 249          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.327e-57
Identity = 105/224 (46.88%), Postives = 149/224 (66.52%), Query Frame = 2
Query:  212 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF 883
            D V +LPGQ   V F  Y+GYV ++  +GR+LFY+FVEA + PD+KPL LWLNGGPGCSS+  G   E+GPF+    G+ L +N  SWN+ +N+LF+DSP GVG+SYSN SSD    GDK  A D L FLL+W ++F + K  D +++GESY GHY+PQL+ AI+ +N  +     N+KG  +GN L     D   +++F+WS G+IS+   + + + CD+  +
Sbjct:   27 DLVVRLPGQP-KVVFRQYAGYVDLDLNAGRSLFYYFVEAEKHPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGYGRGLRINSMSWNKASNLLFVDSPAGVGWSYSNRSSDYNA-GDKSAASDMLVFLLRWFDKFPELKSHDLFLTGESYAGHYIPQLADAILSYNSRSSGFKFNIKGIAIGNPLLKLDRDIPAVYEFFWSHGMISEVVGRTIKIQCDFSHY 248          
BLAST of FC878014 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.508e-56
Identity = 101/161 (62.73%), Postives = 126/161 (78.26%), Query Frame = 2
Query:  200 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYV 682
            Q++ D +  LPGQ  +VNF  Y GYVTVNE +GR+L+Y+FVEA    +S PLVLWLNGGPGCSS+ YG  +E+GPF +  D KTLY NPYSWN VAN+LFL+SP G GFSY+NT++D+   GD +TA D+  FL+KWLERF ++KGRDFYI+GESY GHYV
Sbjct:   74 QKERDLIENLPGQP-SVNFKQYGGYVTVNESAGRSLYYYFVEATNTKNSSPLVLWLNGGPGCSSL-YGAFQELGPFRVHSDNKTLYTNPYSWNNVANMLFLESPAGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFYIAGESYAGHYV 232          
The following BLAST results are available for this feature:
BLAST of FC878014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
HNLS_SORBI6.322e-6350.87P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP44_ARATH2.034e-6151.56Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP43_ARATH2.656e-6149.32Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP42_ARATH4.530e-6150.00Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP38_ARATH1.009e-6046.91Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP36_ARATH4.240e-5950.91Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP46_ARATH9.447e-5950.22Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]
SCP45_ARATH2.104e-5847.39Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP41_ARATH2.327e-5746.88Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
SCP53_ARATH1.508e-5662.73Putative serine carboxypeptidase-like 53 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA8CB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA8CB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878014 ID=FC878014; Name=FC878014; organism=Citrus clementina; type=EST; length=890bp
AAAAAAATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATT
ATGTCTTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAA
ATGGCTTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCAT
TTGCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCC
AGCAAAAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTC
AACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAG
GGCTCTCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGC
CTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTAT
GGAGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGAC
CTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTC
TTGATTCCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGAT
ATTACGACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTT
ACTAAAGTGGTTAGAACGGTTTTCACAATTTAAAGGAAGGGATTTCTACA
TCTCCGGGGAGAGTTATGGAGGGCATTATGTTCCTCAGTTAAGCAAAGCA
ATCATAAGGCACAACCAAGCAACTGGGGAAAAAGCAATTAATCTGAAGGG
CTACATGGTGGGAAATGCTCTAACTGATGATTACCACGATTACTTGGGCC
TTTTCCAGTTTTGGTGGTCAGCTGGTTTGATATCTGATGATACGTACAAG
CAACTAAACCTTCTATGTGATTATGAGTCCTTTGTCCCCC
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