FC878025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.907e-36 Identity = 70/122 (57.38%), Postives = 94/122 (77.05%), Query Frame = 3 Query: 435 EQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E +L A ++ I PN+KWND+ GL++AKQ ++EAV+ P+++PQ FTG PW+ LLYGPPGTGK+ LAKAVATE +TFF+IS+S +VSKW G+SEKLV LF++AR +APS IF+D Sbjct: 233 EMRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLD 354
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.907e-36 Identity = 70/122 (57.38%), Postives = 94/122 (77.05%), Query Frame = 3 Query: 435 EQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E +L A ++ I PN+KWND+ GL++AKQ ++EAV+ P+++PQ FTG PW+ LLYGPPGTGK+ LAKAVATE +TFF+IS+S +VSKW G+SEKLV LF++AR +APS IF+D Sbjct: 232 EMRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLD 353
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 68/122 (55.74%), Postives = 96/122 (78.69%), Query Frame = 3 Query: 435 EQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E +L A ++ I + PNV+W+D+ GL++AK+ ++EAV+ P+++PQ FTG PW+ LLYGPPGTGK+ LAKAVATE ++TFF+IS+S +VSKW G+SEKLV LF++AR +APS IF+D Sbjct: 236 EMRELAAVISRDIYLQNPNVRWDDIIGLDAAKRLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLD 357
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KATL2_XENLA (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus laevis GN=katnal2 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 68/122 (55.74%), Postives = 96/122 (78.69%), Query Frame = 3 Query: 435 EQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E +L A ++ I + PNV+W+D+ GL++AK+ ++EAV+ P+++PQ FTG PW+ LLYGPPGTGK+ LAKAVATE ++TFF+IS+S +VSKW G+SEKLV LF++AR +APS IF+D Sbjct: 236 EMRELAAVISRDIYLQNPNVRWDDIIGLDAAKRLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLD 357
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33 Identity = 70/114 (61.40%), Postives = 88/114 (77.19%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 L II + PNVKW+D+A LE AK+ L+EAV+LP+ P+FF G R+PW+ L+ GPPGTGK+ LAKAVATE +TFF++SSS L SK+ GESEKLV LF+MAR AP+ IFID Sbjct: 190 LERDIISQNPNVKWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPTTIFID 303
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.974e-33 Identity = 69/114 (60.53%), Postives = 88/114 (77.19%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 L II + PN++W+D+A LE AK+ L+EAV+LP+ P+FF G R+PW+ L+ GPPGTGK+ LAKAVATE +TFF+ISSS L SK+ GESEKLV LF+MAR AP+ IFID Sbjct: 196 LERDIISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 309
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.974e-33 Identity = 69/114 (60.53%), Postives = 88/114 (77.19%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 L II + PN++W+D+A LE AK+ L+EAV+LP+ P+FF G R+PW+ L+ GPPGTGK+ LAKAVATE +TFF+ISSS L SK+ GESEKLV LF+MAR AP+ IFID Sbjct: 192 LERDIISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 305
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.974e-33 Identity = 68/125 (54.40%), Postives = 92/125 (73.60%), Query Frame = 3 Query: 426 EDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E P++ L A L ++ P V+W+DVAGL AK+ L+EAV+LP+ P++F G R+PW+ L++GPPGTGK+ LAKAVATE +TFF++SS+ L SKW GESE++V LF +AR APS IFID Sbjct: 215 EGPDE-DLAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFID 338
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.367e-33 Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 3 Query: 435 EQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E L L II + PNV W+D+A LE AK+ L+EAV+LP+ P+FF G R+PW+ L+ GPPGTGK+ LAKAVATE +TFF++SSS L SK+ GESEKLV LF+MAR AP+ IFID Sbjct: 182 EDKDLIDALERDIISQNPNVTWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 303
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.671e-32 Identity = 67/114 (58.77%), Postives = 87/114 (76.32%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 L II + PN++W+D+A L AK+ L+EAV+LP+ P+FF G R+PW+ L+ GPPGTGK+ LAKAVATE +TFF++SSS L SK+ GESEKLV LF+MAR AP+ IFID Sbjct: 196 LERDIISQNPNIRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 309 The following BLAST results are available for this feature:
BLAST of FC878025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 355
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878025 ID=FC878025; Name=FC878025; organism=Citrus clementina; type=EST; length=801bpback to top |