FC878025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.293e-32 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 L I+ P++ W+D+A LE AK+ L+EAV+LP+ P FF G R+PW+ L+ GPPGTGK+ LAKAVATE +TFF++SSS L SK+ GESEKLV LF+MAR AP+ IFID Sbjct: 194 LERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 307
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.293e-32 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 L I+ P++ W+D+A LE AK+ L+EAV+LP+ P FF G R+PW+ L+ GPPGTGK+ LAKAVATE +TFF++SSS L SK+ GESEKLV LF+MAR AP+ IFID Sbjct: 192 LERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 305
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.293e-32 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 L I+ P++ W+D+A LE AK+ L+EAV+LP+ P FF G R+PW+ L+ GPPGTGK+ LAKAVATE +TFF++SSS L SK+ GESEKLV LF+MAR AP+ IFID Sbjct: 194 LERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 307
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.564e-30 Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 LN ++ ++ V W D+AGL +AK +L+EAV+ P P F G R+P R LL+GPPGTGK+ +AKAVATE++STFFS+S+S L+SK++GESEKLV +LF MA++ +PSIIFID Sbjct: 458 LNEILVTDE-KVYWEDIAGLRNAKNSLKEAVVYPFLRPDLFKGLREPVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFID 570
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.668e-30 Identity = 65/110 (59.09%), Postives = 85/110 (77.27%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ V W+D+AGLESAK +L+EAV+ P P F G R+P R LL+GPPGTGK+ LA+AVATE+ STFFSIS+S L SK++GESEKLV +LF +A++ +PSIIF+D Sbjct: 595 IVVHGDEVHWDDIAGLESAKYSLKEAVVYPFLRPDLFRGLREPVRGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVD 704
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.762e-30 Identity = 67/110 (60.91%), Postives = 84/110 (76.36%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ P VK++D+AG E AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 329 IVDSGPAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID 438
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.729e-29 Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ P+VK+ D+AG + AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 316 IVDSGPSVKFADIAGQDLAKQALQEIVILPSIRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFID 425
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.258e-29 Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ P VK+ D+AG + AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 319 IVDSGPTVKFADIAGQDLAKQALQEIVILPSIRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFID 428
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5) HSP 1 Score: 129.413 bits (324), Expect = 2.258e-29 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 3 Query: 438 QAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 + KL + I+ V+W D+AG E AKQALQE VILP P+ FTG R P + LL+GPPG GK+ LA+AVATE +TFFSIS++ L SK++G+ EKLV +LF +ARE PSIIFID Sbjct: 482 EPKLVQIIMDEIVEGGAKVQWQDIAGQEVAKQALQEMVILPSVRPELFTGLRTPAKGLLLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFID 602
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=2 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 2.950e-29 Identity = 78/164 (47.56%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 333 GPGPA---HNGDAAV-----ATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 GPGPA H G + P T + D A L + + I+ VK++D+AG E AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 279 GPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANL---IMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID 439 The following BLAST results are available for this feature:
BLAST of FC878025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 355
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878025 ID=FC878025; Name=FC878025; organism=Citrus clementina; type=EST; length=801bpback to top |