FC878025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.571e-29 Identity = 65/118 (55.08%), Postives = 87/118 (73.73%), Query Frame = 3 Query: 459 LNSAIIRE----KPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 L +I+RE V W+D++GLE AK +L+EAV+ P P F G R+P R LL+GPPGTGK+ LA+AVATE+ S FFSIS+S L SK++GESEKLV +LF +A++ +PSIIF+D Sbjct: 441 LGKSILREIVVSGDEVHWDDISGLEFAKHSLKEAVVYPFLRPDLFQGLREPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVD 558
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.571e-29 Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 492 VKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 VK++D+AG E AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 304 VKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID 406
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 6.571e-29 Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 492 VKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 VK++D+AG E AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 336 VKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID 438
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.571e-29 Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 492 VKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 VK++D+AG E AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 337 VKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID 439
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.571e-29 Identity = 61/114 (53.51%), Postives = 82/114 (71.93%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 + S I+ + W DVAGLE AK+AL+E V+LP + P FTG R P + LL+GPPGTGK+ + + VA++A +TFF+IS+S L SKW+GE EKLV +LF +AR PS+IFID Sbjct: 302 IESEIMSVNNQIGWADVAGLEGAKKALKEIVVLPFQRPDIFTGLRAPPKGVLLFGPPGTGKTMIGRCVASQAQATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFID 415
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.582e-29 Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = 3 Query: 501 NDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 +D+ G+ KQ L EAV LP+ P+FF G R PW+A +L GPPGTGK+ +A+A+A+E+ STFF++SS+DL SKW G+SEK+V LF++AR APSIIFID Sbjct: 193 DDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFID 292
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.121e-28 Identity = 62/114 (54.39%), Postives = 86/114 (75.44%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 +N I +P V W+D+AGL+ AK +L+EAVI P P+ F G R+P + LL+GPPGTGK+ LA+AVATEA +TFFSIS+S L SK++G+SEKLV +LF++A+ S+IF+D Sbjct: 366 MNEIISNHEP-VYWSDIAGLDDAKNSLKEAVIYPFLRPELFQGLREPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVD 478
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.121e-28 Identity = 76/170 (44.71%), Postives = 99/170 (58.24%), Query Frame = 3 Query: 309 IRAVLDDGGPGPA-HNGDAAV-----ATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 + V GP P H G + P T + D A L + + I+ VK++D+AG + AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 275 VSGVKQGSGPAPTTHKGTPKTNRTNKPSTPTTATRKKKDLKNFRNVDSNLANL---IMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID 441
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_DANRE (Spastin OS=Danio rerio GN=spast PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.121e-28 Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = 3 Query: 441 AKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 +KL + + + I+ V+++D+AG + AKQALQE VILP P+ FTG R P R LL+GPPG GK+ LAKAVA E+++TFF+IS++ L SK++GE EKLV +LF +ARE PSIIFID Sbjct: 275 SKLASLILNEIVDSGSVVRFDDIAGQDLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSKYVGEGEKLVRALFAVARELQPSIIFID 394
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEEL (Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.464e-28 Identity = 61/114 (53.51%), Postives = 81/114 (71.05%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 + S I+ + W DVAGLE AK+AL+E V+LP K P FTG R P + LL+GPPGTGK+ + + VA++ +TFF+IS+S L SKW+GE EKLV +LF +AR PS+IFID Sbjct: 302 IESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQCKATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFID 415 The following BLAST results are available for this feature:
BLAST of FC878025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 355
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878025 ID=FC878025; Name=FC878025; organism=Citrus clementina; type=EST; length=801bpback to top |