FC878025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_DROSE (Spastin OS=Drosophila sechellia GN=spas PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27 Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ V+W D+AG + AKQALQE VILP P+ FTG R P + LL+GPPG GK+ LA+AVATE +TF +IS++ L SK++G+ EKLV +LF +AR PSIIFID Sbjct: 473 IVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFID 582
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27 Identity = 63/121 (52.07%), Postives = 83/121 (68.60%), Query Frame = 3 Query: 438 QAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 + KL + I+ V+W D+AG + AKQALQE VILP P+ FTG R P + LL+GPPG GK+ LA+AVATE +TF +IS++ L SK++G+ EKLV +LF +AR PSIIFID Sbjct: 469 EQKLVQLIMDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFID 589
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27 Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ V+W D+AG + AKQALQE VILP P+ FTG R P + LL+GPPG GK+ LA+AVATE +TF +IS++ L SK++G+ EKLV +LF +AR PSIIFID Sbjct: 473 IVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFID 582
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27 Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ V+W D+AG + AKQALQE VILP P+ FTG R P + LL+GPPG GK+ LA+AVATE +TF +IS++ L SK++G+ EKLV +LF +AR PSIIFID Sbjct: 497 IVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFID 606
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27 Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ V+W D+AG + AKQALQE VILP P+ FTG R P + LL+GPPG GK+ LA+AVATE +TF +IS++ L SK++G+ EKLV +LF +AR PSIIFID Sbjct: 473 IVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFID 582
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27 Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = 3 Query: 492 VKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 V W D+AGLESAK EA+I+P++ P FTG R P R LL+GPPGTGK+ +AK++A++A + FFSI+ S L SKW+G++EKLV +LF +A + P+IIFID Sbjct: 247 VAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCPPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFID 349
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.114e-27 Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 ++ E PNVKW D+ GLE AKQ L EAV P+K+P+ F +P R LL+GPPGTGK+ LAKAVA E+++ F S+ +L+SKW+GESEK V +F+ AR+ AP +IF D Sbjct: 445 VLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFD 555 HSP 2 Score: 102.834 bits (255), Expect = 2.264e-21 Identity = 51/109 (46.79%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 477 REKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 R P+V + D+ GL+ + ++E + LP+K P+ F +P + LLYGPPGTGK+ +AKAVA E D+ F IS +++SK+ GESE+ + +F+ A+ENAPSIIFID Sbjct: 174 RAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFID 282
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27 Identity = 64/114 (56.14%), Postives = 81/114 (71.05%), Query Frame = 3 Query: 459 LNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 +N + R+ P VKW+DV GL+ KQ+L E+VILP P FTG R P + LL+GPPG GK+ +AKAVA E+ TFFSISSS L SK++G+ EKLV +LF +A PSIIFID Sbjct: 371 MNEIMDRKNP-VKWDDVVGLDKVKQSLMESVILPNLRPDVFTGLRAPPKGLLLFGPPGNGKTMIAKAVAYESKVTFFSISSSSLTSKYVGDGEKLVRALFAVATHFQPSIIFID 483
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.032e-27 Identity = 56/112 (50.00%), Postives = 80/112 (71.43%), Query Frame = 3 Query: 465 SAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 S I+ P + W+D+AGLE AK ++E V+ P+ P FTG R P + LL+GPPGTGK+ + K +A ++ +TFFSIS+S L SKW+GE EK+V +LF +AR + P++IFID Sbjct: 371 SEIMDHGPPLNWDDIAGLEFAKTTIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFID 482
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.032e-27 Identity = 56/112 (50.00%), Postives = 80/112 (71.43%), Query Frame = 3 Query: 465 SAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 S I+ P + W+D+AGLE AK ++E V+ P+ P FTG R P + LL+GPPGTGK+ + K +A ++ +TFFSIS+S L SKW+GE EK+V +LF +AR + P++IFID Sbjct: 370 SEIMDHGPPLNWDDIAGLEFAKTTIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFID 481 The following BLAST results are available for this feature:
BLAST of FC878025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 355
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878025 ID=FC878025; Name=FC878025; organism=Citrus clementina; type=EST; length=801bpback to top |