FC878025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.370e-26 Identity = 55/110 (50.00%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ P V W+D+AG+E AK ++E V+ P+ P FTG R P + LL+GPPGTGK+ + K +A+++ +TFFSIS+S L SKW+GE EK+V +LF +AR P++IFID Sbjct: 400 IMDHGPPVHWDDIAGVEFAKATIKEIVVWPMMRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFID 509
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.789e-26 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ P V W D+AG+E AK ++E V+ P+ P FTG R P + LL+GPPGTGK+ + K +A+++ +TFFSIS+S L SKW+GE EK+V +LF +AR P++IFID Sbjct: 394 IMDHGPPVHWEDIAGVEFAKATIKEIVVWPMMRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFID 503
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.789e-26 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I+ P V W D+AG+E AK ++E V+ P+ P FTG R P + LL+GPPGTGK+ + K +A+++ +TFFSIS+S L SKW+GE EK+V +LF +AR P++IFID Sbjct: 391 IMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFID 500
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26 Identity = 54/108 (50.00%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 480 EKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E P V WND+ GL++ KQ L+EAV P++FP+ FT P + LL+GPPGTGK+ LAKAVATE+ + F ++ +++SKW+GESEK + +F+ AR+ AP++IF D Sbjct: 480 EVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFD 587 HSP 2 Score: 101.679 bits (252), Expect = 5.043e-21 Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 3 Query: 486 PNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 P V W D+ LE AKQ ++E V P++ P+ F P + LLYGPPGTGK+ LA+A+A E + F +++ +++SK+ GESE+ + +F+ A ENAPSIIFID Sbjct: 207 PKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFID 312
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.800e-26 Identity = 58/110 (52.73%), Postives = 81/110 (73.64%), Query Frame = 3 Query: 474 IREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKSYLAKAVATEADST-FFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 I + +VK +D+ G E+AK+AL+E VILP P F+G RQP + LL+GPPG GK+ LA+AVA E ST F ++S++ L SKW+G++EK+V +LFQ+AR P+IIFID Sbjct: 169 ILNQDDVKMSDIIGAETAKRALEETVILPTVNPSLFSGLRQPAQGILLFGPPGNGKTLLARAVAGECGSTMFLNVSAASLTSKWVGDAEKIVRALFQIARNGQPTIIFID 278
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.978e-25 Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 3 Query: 432 PEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 PE RA + + E+PNV++ D+ GLE Q ++E V LP+K P+ F +P + LLYGPPGTGK+ LAKAVATE ++TF + S+LV K++GE LV +F++A+E APSIIFID Sbjct: 149 PENKDYRA--KAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFID 270
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFT--GKRQPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 ++ E PNVKW D+ GLE KQ L+EAV P+K + F G R P + LL+GPPGTGK+ LAKAVA E+ + F S+ ++ SKW+GESEK + +F+ AR++AP IIF D Sbjct: 442 VLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPP-KGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFD 552 HSP 2 Score: 96.6709 bits (239), Expect = 1.622e-19 Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 3 Query: 486 PNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 P+V + D+ GL+ + ++E + LP++ P+ F +P + LL GPPGTGK+ LAKAVA EA + F+ I+ +++SK++GE+E+ + +F+ A ENAPSIIFID Sbjct: 174 PDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFID 279
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.518e-25 Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 471 IIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR---QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 ++ E PNV W+D+ GLE K+ ++E V LP+ P F KR +P + FLLYGPPG GK+ LAKAVATE+++ F SI +++SKW+GESEK + +F+ A++ AP+I+F+D Sbjct: 457 VMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVF--KRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLD 567 HSP 2 Score: 93.5893 bits (231), Expect = 1.373e-18 Identity = 45/113 (39.82%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 465 SAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 S ++ E + + D+ GL ++E + LP+K P+ F P + +LYGPPGTGK+ +A+AVA E+ + F SI+ +++SK+ G+SE+ + +F A E APSIIFID Sbjct: 178 SEVLEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFID 290
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.418e-23 Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 480 EKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E+PNV +ND+ GL+ Q L+EA+ LP+K P+ F P + LLYGPPG GK+ +AKA+A E ++TF + S+LV K++GE +LV LF++A+E AP+IIFID Sbjct: 130 ERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID 237
BLAST of FC878025 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.125e-23 Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 480 EKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKR-QPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARENAPSIIFID 800 E+PNV +ND+ GL+ Q L+EA+ LP+K P+ F P + LLYGPPG GK+ +AKA+A E ++TF + S+LV K++GE +LV LF++A+E AP+IIFID Sbjct: 133 ERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID 240 The following BLAST results are available for this feature:
BLAST of FC878025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 355
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878025 ID=FC878025; Name=FC878025; organism=Citrus clementina; type=EST; length=801bpback to top |