FC878030

Overview
NameFC878030
Unique NameFC878030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6987 contig Ccv1_Contig6987:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.880e-20
Identity = 60/181 (33.15%), Postives = 96/181 (53.04%), Query Frame = 2
Query:  206 ITTEASKSFAVN---GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAV--YNPWNWANLTNMVWVEQPVGTGFTQGN-------XXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIA 712
            IT  A KS  +    G  G  P       + YAG + I K  N+   L+++F  SE   + D + +WLNGGPGCSS++GF+ E+GP +++     + +   NP++W+ ++N+++++ PVG GF+  N                    L +FK F +    Q+   +I+GESYAG YVP +A
Sbjct:   20 ITKSAPKSALITNLPGFNGTFPS------KHYAGYVAIDKHRNKN--LWYYFVESERNASVDPVVLWLNGGPGCSSMDGFVYEHGPFNFEPKKKNSHLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTDDTKTASDTHTFLLEWFKMFPE---FQSNPFFISGESYAGIYVPTLA 189          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: KEX1_YEAST (Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae GN=KEX1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.067e-20
Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 2
Query:  257 IPDVDFDIGESYAGLLPI-SKAANETS----ELYFWFFPSE--NPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFT----------QGNXXXXXXXXXXXXFLGFFKNFVDTFGLQ-NRKVYITGESYAGRYVPYIADAML-----SKNDSTYYDVKGIM 766
            +PD   +I + +AG +P+ S+ A+E      E +FW F +   N +    + IWLNGGPGCSS++G L E+GP  ++  S      N  +W +  ++++++QP GTGF+            N            F+ F +N+   F     RK+ ++GESYAG+Y+P+ A+A+L     SK D   YD+K ++
Sbjct:   42 VPDPS-NIPQMHAGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGP--FRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALL 231          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBPY_SCHPO (Carboxypeptidase Y OS=Schizosaccharomyces pombe GN=cpy1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.067e-20
Identity = 66/222 (29.73%), Postives = 98/222 (44.14%), Query Frame = 2
Query:  152 LTVPESSLHPHKRQSTQIITTEASKSFAV-----NG---TAGAIPD------------VDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDV 754
            +T      HP K  + Q    ++S+ +AV     NG      A PD            +  D  + Y G L +     +   L+FWFF S N   +D + +WLNGGPGCSSL G   E GP S    +     YNP +W +  ++++++QP+ TGF+ G+               F   F   F    +   +I GESYAG Y+P  A  ++  N    + V
Sbjct:  525 MTAFRDQSHPAKPSNAQ--PADSSRPYAVFSQEENGEHVNLKAFPDHTLRVKDSKPESLGIDTVKQYTGYLDVE----DDRHLFFWFFESRNDPENDPVVLWLNGGPGCSSLTGLFMELGPSSINIET-LKPEYNPHSWNSNASVIFLDQPINTGFSNGDDSVLDTVTAGKDVYAFLNLFFAKFPQYAHLDFHIAGESYAGHYIPQFAKEIMEHNQGANFFV 739          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.129e-19
Identity = 57/181 (31.49%), Postives = 95/181 (52.49%), Query Frame = 2
Query:  290 YAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXF-------LGFFKNFVDTFG-LQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIMFYDPSVAEDVLLE 805
            Y G + +++ A  T  LY++F  +  P  S  + +W NGGPGCSS+  G  +E GP    +  G     NP++W N  NM++ E P+  GF+  +                      F  N+++ F   + R VYI+G+SYAG Y+P +A  +L +N+ T+ +++GI   +P +  D+L+E
Sbjct:   79 YGGYVAVNEPA--TRFLYYYFVEAIKPSKSTPLVLWFNGGPGCSSVGFGAFEELGPFR-VHSDGKTLYRNPYSWNNEANMLFFEGPISVGFSYSSTPFDWEIFGEQADKLTAEDNYMFLVNWLERFPEYKGRDVYISGQSYAGHYIPQLAQIILHRNNQTFINLRGISIGNPGL--DLLIE 254          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 60/190 (31.58%), Postives = 93/190 (48.95%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSL-EGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN--------XXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKND-----STYYDVKGIMFYDPSVA 787
            PDV F   + YAG +P+ K+      L++WFF + +      + +WLNGGPGCSS+  G  QE GP           ++NP+ W    NM+++E PVG GF+  N                       +F+ F +  G    + YI GESYAG YVP +A+ +   N+     S + ++KG +  +P ++
Sbjct:   52 PDVSF---KHYAGYVPVDKSNGRA--LFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLADTNE-KGLIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKG---NEFYIAGESYAGIYVPELAELVYDNNEKNNDLSLHINLKGFLLGNPDIS 232          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBPY_YEAST (Carboxypeptidase Y OS=Saccharomyces cerevisiae GN=PRC1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 54/156 (34.62%), Postives = 77/156 (49.36%), Query Frame = 2
Query:  290 YAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFT-QGNXXXXXXXXXXXXFLGFFKNFVDTFG---LQNRKVYITGESYAGRYVPYIADAMLSKNDSTY 745
            Y G L +    +E    +FW F S N  A D + +WLNGGPGCSSL G   E GP S   G     + NP++W +   +++++QPV  GF+  G+               F + F D F     + +  +I GESYAG Y+P  A  +LS  D  +
Sbjct:  128 YTGYLDVE---DEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSS--IGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNF 278          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.515e-19
Identity = 64/204 (31.37%), Postives = 99/204 (48.53%), Query Frame = 2
Query:  218 ASKSFAVNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSL-EGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF----TQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKV-YITGESYAGRYVPYIADAMLSKND-------STYYDVKGIMFYDPSVAE 790
            A++   V G  G  PDV F     YAG +P+ ++      +++WFF + +      + +WLNGGPGCSS+  G  QE GP      +G    +NP+ W    NM+++E PVG GF    T  +               F  N+ + F        YI GESYAG+YVP +A+ +   N+       S + ++KGI+  +P  ++
Sbjct:   45 ANEQDLVTGLPGQ-PDVSF---RHYAGYVPVDESNGRA--MFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLVD-TNGNGLNFNPYAWNKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFYIAGESYAGKYVPELAEVVYDNNNNNKKNGSSFHINLKGILLGNPETSD 241          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.515e-19
Identity = 50/144 (34.72%), Postives = 79/144 (54.86%), Query Frame = 2
Query:  290 YAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGF--FKNFVDTF-GLQNRKVYITGESYAGRYVPYIA 712
            Y+G L     A+++   ++WF  S+N   +  + +WLNGGPGCSSL+G L E+GP   Q   G    YNP+ W  + N++++E P G GF+  +               +   K+F   F   ++ K+++TGESYAG Y+P +A
Sbjct:   45 YSGYL----RASDSKHFHYWFVESQNDPKNSPVVLWLNGGPGCSSLDGLLTEHGPFLIQ-PDGVTLEYNPYAWNLIANVLYIESPAGVGFSYSDDKMYVTNDTEVAENNYEALKDFFRLFPEYKDNKLFLTGESYAGIYIPTLA 183          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: KEX1_SCHPO (Carboxypeptidase kex1 OS=Schizosaccharomyces pombe GN=kex1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.285e-19
Identity = 56/159 (35.22%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  266 VDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQ--GNXXXXXXXXXXXXFLGFFKNFVDTFGLQ-NRKVYITGESYAGRYVPYIADAMLSKN 733
            VD++ G  +AG L  ++      +L+FW F S  P+      +WLNGGPGCSS +G L E GP  ++         NP  W  L N+++V+QP+GTG++                 F  FF+ F++ F  + N + +I GES+AG+Y+P+IA  +  KN
Sbjct:   39 VDYE-GRMHAGHL--NQTDQLDGDLFFWMFESVKPEYEHRSILWLNGGPGCSSEDGSLMEVGP--FRLDDNNTFQLNPGRWDELGNLLFVDQPLGTGYSYSLAKDFQSNNEKMANDFSIFFEKFLEEFPERANDEWFIAGESFAGQYIPHIAAKLKEKN 192          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBPY_CANAL (Carboxypeptidase Y OS=Candida albicans GN=CPY1 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.285e-19
Identity = 56/165 (33.94%), Postives = 84/165 (50.91%), Query Frame = 2
Query:  263 DVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF---TQGNXXXXXXXXXXXXFLG-FFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDSTY 745
            D+  D  + Y+G L +    +E    +++FF S N   +D + +WLNGGPGCSSL G   E GP S      P  VYNP +W    ++++++QP+  G+   +Q              FL  FFKNF +     N   +I GESYAG Y+P  A  +L+  +  +
Sbjct:  134 DLGIDTVKQYSGYLDV---VDEDKHFFYYFFESRNDPKNDPVILWLNGGPGCSSLTGLFFELGPSSIDKNLKP--VYNPHSWNANASVIFLDQPINVGYSYSSQSVSNTIAAGKDVYAFLQLFFKNFPE---YANLDFHIAGESYAGHYIPAFASEILTHPERNF 290          
The following BLAST results are available for this feature:
BLAST of FC878030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
SCP21_ARATH3.880e-2033.15Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
KEX1_YEAST5.067e-2032.64Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae ... [more]
CBPY_SCHPO5.067e-2029.73Carboxypeptidase Y OS=Schizosaccharomyces pombe GN... [more]
SCP38_ARATH1.129e-1931.49Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP30_ARATH1.926e-1931.58Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
CBPY_YEAST1.926e-1934.62Carboxypeptidase Y OS=Saccharomyces cerevisiae GN=... [more]
SCP31_ARATH2.515e-1931.37Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
PPGB_MOUSE2.515e-1934.72Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
KEX1_SCHPO3.285e-1935.22Carboxypeptidase kex1 OS=Schizosaccharomyces pombe... [more]
CBPY_CANAL3.285e-1933.94Carboxypeptidase Y OS=Candida albicans GN=CPY1 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA73AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878030 ID=FC878030; Name=FC878030; organism=Citrus clementina; type=EST; length=890bp
CACAGCACGAGCTTGACTTCCAACTAATCCCGGCACTGCGATCGCGAAGA
TGCAGCTTCTTTCACTCCTCGCTGTTGGTGGCCTCACAGCCAGTGTTTCT
GCCCGAAGCGCTCGCTCTGTTGGCAAGAAGAATGAGCTCCCTCGTCCTCG
TTTGACTGTTCCAGAATCGAGCCTTCATCCCCACAAGCGTCAGAGCACTC
AGATCATCACTACCGAGGCCTCCAAGTCTTTCGCTGTCAACGGAACTGCT
GGAGCAATCCCCGACGTCGATTTTGACATTGGCGAGTCTTACGCTGGTCT
TTTACCTATCAGCAAAGCTGCTAATGAGACCTCTGAACTGTACTTCTGGT
TCTTCCCATCCGAGAACCCTGATGCGAGTGACGAGATCACCATCTGGCTG
AACGGTGGTCCAGGTTGCTCATCTCTTGAAGGATTTCTTCAAGAGAACGG
ACCGATCTCATGGCAGTACGGTTCCGGACCAGCCGCTGTTTACAACCCCT
GGAATTGGGCAAACCTCACCAACATGGTCTGGGTTGAGCAGCCAGTGGGC
ACTGGATTCACCCAAGGCAATGCTACTGCCACCTCTCAGGAGGAGACCGC
TGAGGAATTCCTTGGCTTCTTCAAGAACTTTGTTGATACATTCGGTCTGC
AGAACCGCAAGGTGTACATCACTGGCGAGTCATACGCCGGACGCTACGTC
CCTTACATCGCGGATGCCATGTTGAGCAAAAACGACTCTACCTACTACGA
TGTGAAGGGTATCATGTTTTACGACCCCAGTGTAGCTGAGGATGTTCTTC
TTGAGGATATTCCCGCTGTTGCCTTTGTCGACAAATGGGCTGGTCTCTTT
CACTTTAACCAGACCTTCATGGACGATATCCATAACCGCT
back to top