FC878030

Overview
NameFC878030
Unique NameFC878030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6987 contig Ccv1_Contig6987:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.290e-19
Identity = 62/185 (33.51%), Postives = 97/185 (52.43%), Query Frame = 2
Query:  290 YAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSL-EGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN---XXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDST---YYDVKGIMFYDPSVAEDVLLEDIPAV 820
            YAG + +   A  +  L+++F  +E    +  +T+WLNGGPGCSS+  G   E GP  +  G G     N  +W   +N+++V+ P G G++  N                L F   + D F  L++  +++TGESYAG Y+P +ADA+LS N  +    +++KGI   +P +  D    DIPAV
Sbjct:   43 YAGYVDLDLNAGRS--LFYYFVEAEKHPDTKPLTLWLNGGPGCSSVGGGAFTELGPF-YPTGYGRGLRINSMSWNKASNLLFVDSPAGVGWSYSNRSSDYNAGDKSAASDMLVFLLRWFDKFPELKSHDLFLTGESYAGHYIPQLADAILSYNSRSSGFKFNIKGIAIGNPLLKLD---RDIPAV 221          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 2
Query:  329 TSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGF--FKNFVDTF-GLQNRKVYITGESYAGRYVPYIA 712
            +  L++WF  S+    +  + +WLNGGPGCSSL+G L E+GP   Q   G    YNP++W  + N++++E P G GF+  +               F   ++F   F   +N K+++TGESYAG Y+P +A
Sbjct:   59 SKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQ-PDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLA 188          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 55/169 (32.54%), Postives = 91/169 (53.85%), Query Frame = 2
Query:  257 IPDVDFDIGES-YAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF----TQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDST 742
            +P   FD   + YAG + +S+  +  + L++WFF + +  AS  + +WLNGGPGCSS+  G  +E GP       G     NP++W  + N+++++ PVG G+    T  +             L F   +++ F   + R+ Y+TGESYAG YVP +A A+   +++T
Sbjct:    4 VPGQAFDASFAHYAGYVTVSE--DRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVN-ADGKGVHMNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLAQAIKRHHEAT 169          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.630e-18
Identity = 67/223 (30.04%), Postives = 102/223 (45.74%), Query Frame = 2
Query:  152 LTVPESSLHPHKRQSTQIITTEASKSFAVNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN----XXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYD----VKGIMFYDPSVAE 790
            L +P  +      +   I ++   +   V G  G  P V+F     Y  L P  K       L++WFF ++   +   + +WLNGGPGCSS+  G  QE GP    + +G    YN ++W    NM+++E PVG GF+  N                 L F  N+   F   ++ + YI+GESYAG YVP +A+ +  +N     D    +KG M  +  + E
Sbjct:   12 LVLPAIACGRKPEKKVTISSSGRKEDDLVTGLPGQ-PPVNFKHYAGYVNLGPEQKQ----KALFYWFFEAQQNSSRRPLVLWLNGGPGCSSIAYGAAQELGPF-LVHDNGGKLTYNHFSWNKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFYISGESYAGHYVPQLAEVIYDRNKKVTKDSSINLKGFMIGNAVINE 228          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.630e-18
Identity = 56/182 (30.77%), Postives = 88/182 (48.35%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN--------XXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKN----DSTYYDVKGIM 766
            P V F     YAG + +++       L++WFF +    +   + +WLNGGPGCSS+  G  +E GP   Q  S P    NP++W    N++++E PVG GF+  N                     + +FK F      ++   YI GESYAG YVP +++ +  +N       + ++KG+M
Sbjct:   59 PPVKF---RQYAGYVTVNETHGRA--LFYWFFEATQNPSKKPVLLWLNGGPGCSSIGFGAAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQ---YKSHDFYIAGESYAGHYVPQLSELIYKENKIASKKDFINLKGLM 232          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.129e-18
Identity = 47/131 (35.88%), Postives = 72/131 (54.96%), Query Frame = 2
Query:  329 TSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGF--FKNFVDTF-GLQNRKVYITGESYAGRYVPYIA 712
            +  L++WF  S+    S  + +WLNGGPGCSSL+G L E+GP   Q   G    YNP++W  + N++++E P G GF+  +               F   K+F   F   +  ++++TGESYAG Y+P +A
Sbjct:   58 SKRLHYWFVESQKDPKSSPVVLWLNGGPGCSSLDGLLTEHGPFLIQ-PDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKSYATNDTEVAQSNFEALKDFFCLFPEYKGNELFLTGESYAGIYIPTLA 187          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CPVL_PONAB (Probable serine carboxypeptidase CPVL OS=Pongo abelii GN=CPVL PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.781e-18
Identity = 56/169 (33.14%), Postives = 83/169 (49.11%), Query Frame = 2
Query:  287 SYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGL----QNRKVYITGESYAGRYVPYIADAMLSKND--STYYDVKGIMFYD 775
            SYAG L ++K  N  S L+FWFFP++       + +WL GGPG SS+ G   E+GP  +   S        + W    +M++++ PVGTGF+  +                +   +  F +    +N   Y+TGESYAG+YVP IA  + S N       ++KGI   D
Sbjct:   73 SYAGFLTVNKTYN--SNLFFWFFPAQIQPEDAPVVLWLQGGPGFSSMFGLFVEHGP--YVVTSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVAQDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVREVKINLKGIAIGD 237          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.632e-18
Identity = 58/175 (33.14%), Postives = 90/175 (51.43%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLG----FFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIM 766
            P V FD    Y G + ++++A  +   +++F  +     S  + +WLNGGPGCSSL  G LQE GP    +  G     N + W N  N++++E P G GF+  N                   F  N+++ F   + R +YI GESYAG YVP +A  +L  + S ++++KGI+
Sbjct:   89 PPVSFD---QYGGYVTVNESAGRS--FFYYFVEASKSKDSSPLLLWLNGGPGCSSLAYGALQELGPFR-VHSDGKTLFRNRYAWNNAANVLFLESPAGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYKGRDLYIAGESYAGHYVPQLAHTILLHHRS-FFNLKGIL 256          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 53/154 (34.42%), Postives = 79/154 (51.30%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLG----FFKNFVDTF-GLQNRKVYITGESYAGRYVPY 706
            P V+F   + Y G + ++++A  +  LY++F  + N   S  + +WLNGGPGCSSL G  QE GP    +        NP++W N+ NM+++E P GTGF+  N                   F   +++ F   + R  YI GESYAG YV +
Sbjct:   87 PSVNF---KQYGGYVTVNESAGRS--LYYYFVEATNTKNSSPLVLWLNGGPGCSSLYGAFQELGPFR-VHSDNKTLYTNPYSWNNVANMLFLESPAGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFYIAGESYAGHYVQW 234          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CPVL_HUMAN (Probable serine carboxypeptidase CPVL OS=Homo sapiens GN=CPVL PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 52/154 (33.77%), Postives = 78/154 (50.65%), Query Frame = 2
Query:  284 ESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGL----QNRKVYITGESYAGRYVPYIADAMLSKN 733
            +SYAG L ++K  N  S L+FWFFP++       + +WL GGPG SS+ G   E+GP  +   S        + W    +M++++ PVGTGF+  +                +   +  F +    +N   Y+TGESYAG+YVP IA  + S N
Sbjct:   72 KSYAGFLTVNKTYN--SNLFFWFFPAQIQPEDAPVVLWLQGGPGGSSMFGLFVEHGP--YVVTSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVARDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLN 221          
The following BLAST results are available for this feature:
BLAST of FC878030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
SCP41_ARATH4.290e-1933.51Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
PPGB_HUMAN7.317e-1935.88Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
CBP22_HORVU9.557e-1932.54Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP35_ARATH1.630e-1830.04Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP34_ARATH1.630e-1830.77Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
PPGB_BOVIN2.129e-1835.88Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
CPVL_PONAB2.781e-1833.14Probable serine carboxypeptidase CPVL OS=Pongo abe... [more]
SCP40_ARATH3.632e-1833.14Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
SCP53_ARATH4.743e-1834.42Putative serine carboxypeptidase-like 53 OS=Arabid... [more]
CPVL_HUMAN4.743e-1833.77Probable serine carboxypeptidase CPVL OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878030 ID=FC878030; Name=FC878030; organism=Citrus clementina; type=EST; length=890bp
CACAGCACGAGCTTGACTTCCAACTAATCCCGGCACTGCGATCGCGAAGA
TGCAGCTTCTTTCACTCCTCGCTGTTGGTGGCCTCACAGCCAGTGTTTCT
GCCCGAAGCGCTCGCTCTGTTGGCAAGAAGAATGAGCTCCCTCGTCCTCG
TTTGACTGTTCCAGAATCGAGCCTTCATCCCCACAAGCGTCAGAGCACTC
AGATCATCACTACCGAGGCCTCCAAGTCTTTCGCTGTCAACGGAACTGCT
GGAGCAATCCCCGACGTCGATTTTGACATTGGCGAGTCTTACGCTGGTCT
TTTACCTATCAGCAAAGCTGCTAATGAGACCTCTGAACTGTACTTCTGGT
TCTTCCCATCCGAGAACCCTGATGCGAGTGACGAGATCACCATCTGGCTG
AACGGTGGTCCAGGTTGCTCATCTCTTGAAGGATTTCTTCAAGAGAACGG
ACCGATCTCATGGCAGTACGGTTCCGGACCAGCCGCTGTTTACAACCCCT
GGAATTGGGCAAACCTCACCAACATGGTCTGGGTTGAGCAGCCAGTGGGC
ACTGGATTCACCCAAGGCAATGCTACTGCCACCTCTCAGGAGGAGACCGC
TGAGGAATTCCTTGGCTTCTTCAAGAACTTTGTTGATACATTCGGTCTGC
AGAACCGCAAGGTGTACATCACTGGCGAGTCATACGCCGGACGCTACGTC
CCTTACATCGCGGATGCCATGTTGAGCAAAAACGACTCTACCTACTACGA
TGTGAAGGGTATCATGTTTTACGACCCCAGTGTAGCTGAGGATGTTCTTC
TTGAGGATATTCCCGCTGTTGCCTTTGTCGACAAATGGGCTGGTCTCTTT
CACTTTAACCAGACCTTCATGGACGATATCCATAACCGCT
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