FC878030

Overview
NameFC878030
Unique NameFC878030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.195e-18
Identity = 56/172 (32.56%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  284 ESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSL-EGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQ-----NRKVYITGESYAGRYVPYIADAMLSKNDSTY-YDVKGIMFYDP 778
            + Y+G + +         L+++F  +E   +S  + +WLNGGPGCSSL  G   ENGP       GP  V N  +W    NM+++E PVG GF+                      F+  + L+     NR ++ITGESYAG YVP +A+ M+  N   + ++++GI   +P
Sbjct:   44 QQYSGYVTVDDKKQRA--LFYYFAEAETNPSSKPLVLWLNGGPGCSSLGVGAFSENGPFR---PKGPILVKNQHSWNQEANMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQRWFLKFPHYLNRSLFITGESYAGHYVPQLAELMIQYNKKHHLFNLRGIAIGNP 210          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.195e-18
Identity = 57/179 (31.84%), Postives = 87/179 (48.60%), Query Frame = 2
Query:  257 IPDVDFDIG-ESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQ-----NRKVYITGESYAGRYVPYIADAML---SKNDSTYYDVKGIM 766
            +P +  +IG +SY G L  +  A     L++WFF S    + D + +W NGGPGCSSL G   E+G +      G     NP++W  ++N++++EQPVG GF+  N                  N +  F  +      R+ Y+ GESY G YVP  A  ++    K    Y ++ GI+
Sbjct:   19 LPGLSGNIGVKSYTGYLLAN--ATRGRYLFYWFFESMRNPSQDPLVMWTNGGPGCSSLGGEASEHG-LFLVNADGATITRNPYSWNRVSNILYIEQPVGVGFSYSNSTDDYQNLNDVQAASDMNNALRDFLTRFPQFIGRETYLAGESYGGVYVPTTAYNIVEGNGKGQQPYVNLVGIL 194          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.090e-18
Identity = 61/194 (31.44%), Postives = 99/194 (51.03%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEG-FLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXX---FLGFFKNFVDTFG-LQNRKVYITGESYAGRYVPYIADAMLSKNDST---YYDVKGIMFYDPSVAEDVLLEDIPA 817
            P V F   + YAG + +   A  +  L++++  +     S  +T+WLNGGPGCSS+ G    E GP  +  G G     N  +W   +++++VE P G G++  N                L F   + + F  L++R +++TGESYAG Y+P +ADA+LS N  +    +++KG+   +P +  D    D PA
Sbjct:   40 PTVGF---KQYAGYVDVDVKAGRS--LFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPF-YPTGDGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYNTGDKSTANDMLVFLLRWFEKFPKLKSRDLFLTGESYAGHYIPQLADAILSYNSHSSGFKFNIKGVAIGNPLLKLD---RDSPA 224          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 56/201 (27.86%), Postives = 96/201 (47.76%), Query Frame = 2
Query:  227 SFAVNGTAGA----IPDVDFDIG-ESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF---TQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIMFYDPSVAEDVLLE 805
            +F V  T G     +P +DF+   + Y+G   +S    +   L++WF  S+N  ++D +  W NGGPGCSSL+G L E GP       G     N ++W  + ++V++E P G G+   T GN            +    + F +    ++ + +I GESY G YVP +   ++        ++KG+   +  V E + ++
Sbjct:    8 AFFVGVTCGEEIKDLPGLDFEPNFKHYSGFFQVS----DNHVLHYWFVESQNEPSNDPLIFWFNGGPGCSSLDGLLNEMGPYV-ANEDGKTLRENEYSWNKMASVVYIESPAGVGYSYATDGNITTNDDLTSLENYEAVKQFFTEFPQFRHHQTFIMGESYGGVYVPTLTARIVDGQKDFPINLKGMALGNGYVNEKLNID 203          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 61/196 (31.12%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSL-EGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN---XXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKN----DSTYYDVKGIMFYDPSVAEDVLLEDIPAV 820
            P+V F     +AG + I   A  +  L+++F  +E    S  +T+WLNGGPGCSS+  G   E GP  +  G       NP +W   +N+++V+ P G G++  N                L F   +++ F   + R +++ GESYAG YVP +AD +L  N    +   +++KGI   +P +  D    D+PA+
Sbjct:   45 PEVAF---RQFAGYVDIDVKAGRS--LFYYFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPF-YPTGDARGLRRNPKSWNKASNLLFVDSPAGVGWSYSNTTSDYTTGDESTAKDMLVFMLRWLEKFPQFKTRNLFLAGESYAGHYVPQLADVILEYNAQRSNRFKFNLKGIAIGNPLLKLD---RDVPAI 231          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 52/190 (27.37%), Postives = 89/190 (46.84%), Query Frame = 2
Query:  191 QSTQIITTEASKSFAVNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQ-----NRKVYITGESYAGRYVPYIADAMLSKN 733
            Q   ++   A  S  +    G    + F++   Y G+        E  +L+++F  SEN    D + +WL GGPGCSS  G + ENGP++++     GS P  V   ++W  + N+++++QPVGTGF+                +     FV  +  +     +   Y+TG SY+G+ +P I   + + N
Sbjct:   13 QCVLVLIQHADSSSIIRYLPGFEGPLPFELETGYIGV-----GQKEEDQLFYYFIKSENNPEEDPLLVWLTGGPGCSSFSGLVYENGPLAFKVETYNGSVPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPFADIPSDTGS-VKRVNEFVRKWLAKHPEYFSNPFYVTGNSYSGKVIPAIVQEISNGN 196          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 60/173 (34.68%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  266 VDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSL-EGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN----XXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIM 766
            VDF     YAG + +  AA      Y       N D +  + +WLNGGPGCSSL  G ++E GP       G     NP++W +  N++++E P G G++  N                   F  N+++ F   + R+ YITGESYAG YVP +A A+L ++ S   ++KGIM
Sbjct:   96 VDF---AQYAGYVTVDAAAGRALFYYLAEAVGGNGDKTKPLLLWLNGGPGCSSLGYGAMEELGPFR-VMSDGKTLYSNPYSWNHAANVLFLESPAGVGYSYSNTTADYGRSGDNGTAEDAYQFLDNWLERFPEYKGREFYITGESYAGHYVPQLAHAIL-RHASPDINLKGIM 263          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CPVL_RAT (Probable serine carboxypeptidase CPVL OS=Rattus norvegicus GN=CPVL PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 2
Query:  284 ESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGL----QNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDV--KGIMFYD 775
            +SYAG + +++  N  S L+FWFFP+    A   + +WL GGPG SS+ G   E+GP  +   S    +   + W    +M++++ PVGTGF+  +                +   V  F L         YITGESYAG+YVP IA  + S N    + +  KGI   D
Sbjct:   74 KSYAGYITVNQTYN--SNLFFWFFPARTQPADAPVVLWLQGGPGGSSMFGLFVEHGP--YIITSNMTVLSRDFPWTFSLSMLYIDNPVGTGFSFTDHIQGYAIDEDDVAQDLYSALVQFFKLFPEYAKNDFYITGESYAGKYVPAIAYYIHSLNPVRRFKIRLKGIALGD 239          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.354e-17
Identity = 61/189 (32.28%), Postives = 95/189 (50.26%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEG-FLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXX-------FLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDST---YYDVKGIMFYDPSVAED 793
            P+V F     +AG + +  + N  S  Y++    + PD    +T+WLNGGPGCSS+ G    E GP  +  G G     N  +W   +N+++VE P G G++  N                    L +F  F +   L++R +++TGESYAG Y+P +AD +LS N  +    ++VKGI   +P +  D
Sbjct:   39 PNVGF---RQFAGYVDVD-SENGRSLFYYYVEAVKEPDTKP-LTLWLNGGPGCSSVGGGAFTELGPF-YPTGDGRGLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYNTGDKSTVNDMLVFLLRWFNKFPE---LKSRDLFLTGESYAGHYIPQLADVILSYNSRSSGFKFNVKGIAIGNPLLKLD 218          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP47_ARATH (Serine carboxypeptidase-like 47 OS=Arabidopsis thaliana GN=SCPL47 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.074e-17
Identity = 66/201 (32.84%), Postives = 103/201 (51.24%), Query Frame = 2
Query:  158 VPESSLHPHKRQSTQI--ITTEASKSFAVNGTAGAIPDVDFDIGESYAGL--LPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRK-----VYITGESYAGRYVPYIADAMLSKN 733
            +P+ SL   +    QI  + T  SK+ +V       P V  + G  YAG   LP SK+A    +++++FF S N   +D + IWL GGPGCSS      ENGP  ++     +  +N + W  ++N+++V+QPVGTGF+  +                + +F+  F  ++ K      +ITGESYAG Y+P +A  + S N
Sbjct:   61 IPKGSLDAPRLIERQIDFLATAGSKNASVG------PSVQ-EFGH-YAGYYSLPHSKSA----KMFYFFFESRNK-TTDPVVIWLTGGPGCSSSVAMFYENGP--FKISKDLSLYWNDFGWDKVSNIIYVDQPVGTGFSYTSDESDIRNDEDGVSNDLY-DFLQAFFKEHPKFVKNDFFITGESYAGHYIPALASRVHSGN 245          
The following BLAST results are available for this feature:
BLAST of FC878030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
SCP45_ARATH6.195e-1832.56Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
NF314_NAEFO6.195e-1831.84Virulence-related protein Nf314 OS=Naegleria fowle... [more]
SCP42_ARATH8.090e-1831.44Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
YUW5_CAEEL1.057e-1727.86Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
SCP44_ARATH1.057e-1731.12Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP15_ARATH1.057e-1727.37Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]
CBP23_HORVU1.057e-1734.68Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
CPVL_RAT1.380e-1733.53Probable serine carboxypeptidase CPVL OS=Rattus no... [more]
SCP43_ARATH2.354e-1732.28Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP47_ARATH3.074e-1732.84Serine carboxypeptidase-like 47 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878030 ID=FC878030; Name=FC878030; organism=Citrus clementina; type=EST; length=890bp
CACAGCACGAGCTTGACTTCCAACTAATCCCGGCACTGCGATCGCGAAGA
TGCAGCTTCTTTCACTCCTCGCTGTTGGTGGCCTCACAGCCAGTGTTTCT
GCCCGAAGCGCTCGCTCTGTTGGCAAGAAGAATGAGCTCCCTCGTCCTCG
TTTGACTGTTCCAGAATCGAGCCTTCATCCCCACAAGCGTCAGAGCACTC
AGATCATCACTACCGAGGCCTCCAAGTCTTTCGCTGTCAACGGAACTGCT
GGAGCAATCCCCGACGTCGATTTTGACATTGGCGAGTCTTACGCTGGTCT
TTTACCTATCAGCAAAGCTGCTAATGAGACCTCTGAACTGTACTTCTGGT
TCTTCCCATCCGAGAACCCTGATGCGAGTGACGAGATCACCATCTGGCTG
AACGGTGGTCCAGGTTGCTCATCTCTTGAAGGATTTCTTCAAGAGAACGG
ACCGATCTCATGGCAGTACGGTTCCGGACCAGCCGCTGTTTACAACCCCT
GGAATTGGGCAAACCTCACCAACATGGTCTGGGTTGAGCAGCCAGTGGGC
ACTGGATTCACCCAAGGCAATGCTACTGCCACCTCTCAGGAGGAGACCGC
TGAGGAATTCCTTGGCTTCTTCAAGAACTTTGTTGATACATTCGGTCTGC
AGAACCGCAAGGTGTACATCACTGGCGAGTCATACGCCGGACGCTACGTC
CCTTACATCGCGGATGCCATGTTGAGCAAAAACGACTCTACCTACTACGA
TGTGAAGGGTATCATGTTTTACGACCCCAGTGTAGCTGAGGATGTTCTTC
TTGAGGATATTCCCGCTGTTGCCTTTGTCGACAAATGGGCTGGTCTCTTT
CACTTTAACCAGACCTTCATGGACGATATCCATAACCGCT
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