FC878030

Overview
NameFC878030
Unique NameFC878030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6987 contig Ccv1_Contig6987:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16
Identity = 50/176 (28.41%), Postives = 82/176 (46.59%), Query Frame = 2
Query:  257 IPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAV-YNPWNWANLTNMVWVEQPVGTGF---TQGNXXXXXXXXXXXXF---LGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGI 763
            +P       + Y+G   +    N    L++WF  S++  ++D + +WL GGPGCS L   L E GP  W   +  A +  NP++W    +++ +E P G G+   T  N            +   + FF  F    G      Y+TGESY G YVP +   +L +   ++ ++KG+
Sbjct:   27 LPGAPISNFKQYSGYYNVGTKKNHM--LHYWFVESQSNPSTDPVLLWLTGGPGCSGLSALLTEWGP--WNVNTDGATLRTNPYSWNKNASILTLEAPAGVGYSYATDNNIATGDDQTASENWEALVAFFNEFPQYKG---NDFYVTGESYGGIYVPTLVQTILDRQSQSHINIKGL 195          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP14_ARATH (Serine carboxypeptidase-like 14 OS=Arabidopsis thaliana GN=SCPL14 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16
Identity = 49/190 (25.79%), Postives = 88/190 (46.32%), Query Frame = 2
Query:  191 QSTQIITTEASKSFAVNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQ-----NRKVYITGESYAGRYVPYIADAMLSKN 733
            Q   ++T  A  S  +    G    + F++   Y G+        +  +++++F  SE+    D + +WL+GGPGCSS  G + ENGP+ ++     GS P  V   ++W  + N+++++QPVG GF+                      FV  +  +     +   Y+TG SY+G+ +P I   + + N
Sbjct:   12 QLVLLLTKHADSSSIIKYLPGFEGPLPFELETGYIGV-----GDEDEDQMFYYFIKSESNPEEDPLLVWLSGGPGCSSFTGLVYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGAGFSYSRNPFADRPSDTGS-AKLVNEFVRKWLAKHPDYFSNPFYVTGNSYSGKVIPAIVQEISNGN 195          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 48/171 (28.07%), Postives = 83/171 (48.54%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN--XXXXXXXXXXXXFLGFFKNFVDTFGLQ-NRKVYITGESYAGRYVPYIADAMLSKN 733
            G  G +P   F++   Y G+       +E  + +++F  SEN    D + IWLNGGPGCS L G + ENGP+  ++    GS P+     ++W  + N+++++QPVG+GF+                    F + ++       +  +Y+ G+SY+G  VP +   +   N
Sbjct:   28 GFEGPLP---FELETGYIGI-----GEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGN 190          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKV-----YITGESYAGRYVPYIADAM---LSKNDSTYYDVKG 760
            P VD D+G  +AG   + K+    + ++++FF S N   +  + IWL GGPGCSS      ENGP  ++  S  +  +N + W  ++N+++V+QPVGTGF+                   + +F+  F  ++ K+     YITGESYAG Y+P  A  +      N+  + ++KG
Sbjct:   92 PTVD-DLGH-HAGYYKLPKSRG--ASMFYFFFESRNKKDAP-VVIWLTGGPGCSSELAVFYENGP--FKITSNMSLAWNEYGWDQVSNLLYVDQPVGTGFSYTTDKSDIRHDETGVSNDLY-DFLQAFFAEHPKLAKNDFYITGESYAGHYIPAFASRVHKGNKANEGVHINLKG 258          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 48/163 (29.45%), Postives = 85/163 (52.15%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRK-----VYITGESYAGRYVP 703
            G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL+GGPGCSSL G L ENGP++ ++    GS P+ V   ++W  + N+++++QPVG+GF+                   ++ F+  +  ++++      Y+ G+SY+G  VP
Sbjct:   31 GFEGPLP---FELETGYIGI-----GEEEEVQLFYYFIKSEKNPEEDPLLLWLSGGPGCSSLTGLLFENGPVALKFEVYNGSVPSLVSTTYSWTKMANIIFLDQPVGSGFSYSRTPLVDKISDTGEVKRIYE-FLQKWLSKHQQFFSNPFYVGGDSYSGMIVP 184          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16
Identity = 53/194 (27.32%), Postives = 90/194 (46.39%), Query Frame = 2
Query:  191 QSTQIITTEASKSFAVNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQ---------NRKVYITGESYAGRYVPYIADAMLSKN 733
            Q   ++T  A  S  +    G    + F++   Y G+        +  +++++F  SE+   +D + +WL+GGPGCSS  G + ENGP+ ++     GS P  V   ++W  + N+++++QPVGTGF+                 G  K  VD F  +         +   Y  G SY+G+ VP I   + + N
Sbjct:   12 QLVLLLTKHADSSSIIKYLPGFEGPLPFELETGYIGV-----GEEDEDQMFYYFIKSESNPKTDPLLLWLSGGPGCSSFTGLIYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPLADIPSD----TGSAKR-VDEFLRKWLTKHPEYFSNPFYAGGNSYSGKMVPVIVQEISNGN 195          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16
Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYG----SGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQ----NRKVYITGESYAGRYVPYIA 712
            G  GA+P       + YAG + + +       L+++   SE     D + +WLNGGPGCSS +GF+ E+GP +++ G    S P    NP+ W+ ++ M++++ P G G +                       +  F L     +   YI GESYAG YVP ++
Sbjct:   42 GFDGALPS------KHYAGYVTVDEGHGRN--LFYYVVESERDPGKDPVVLWLNGGPGCSSFDGFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVSDYETGDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLS 198          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2
Query:  338 LYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF---TQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGI 763
            L++W   S      D + +WLNGGPGCSSL+G ++E GP   +   G +  YN + W    N++++E P G G+   T  N            ++    +F+  F   + R  +ITGESYAG Y+P +A  +L+ +   + + KG+
Sbjct:   53 LHYWLTESSRAPTQDPLVLWLNGGPGCSSLDGLIEELGPFHVK-DFGNSIYYNEYAWNKFANVLFLESPAGVGYSYSTNFNLTVSDDEVSLHNYMALL-DFLSKFPEYKGRDFWITGESYAGVYIPTLAVRILN-DKKNFPNFKGV 195          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 55/194 (28.35%), Postives = 92/194 (47.42%), Query Frame = 2
Query:  215 EASKSFAVNGTAGAIPDVDFDIGES-YAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF----TQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKN---DSTYYDVKGIM 766
            EA  S         +P  +F++  + Y+G +  ++       L++W F +     S  + +WLNGGPGCSS+  G  +E GP   +   G     N ++W    N+++++ PVG G+    T  +             L F   +V+ F   + R  YI GESYAG Y+P +++A++  N   D    ++KG M
Sbjct:   27 EAGLSQKEQDKVSKLPGQNFNVSFAHYSGFVATNEQLGRA--LFYWLFEAVEDAKSKPLVLWLNGGPGCSSVAYGEAEEIGPFHIK-ADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIPQLSEAIVKHNQGSDKNSINLKGYM 217          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 55/213 (25.82%), Postives = 100/213 (46.95%), Query Frame = 2
Query:  209 TTEASKSFAVNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFT----------QGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKN---DSTYYDVKGIMFYDPSVAEDV 796
            T  AS   ++ G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL+GGPGCSS+ G L ENGP++ +     G+ P+ V   ++W  ++++++++QPVGTGF+            +            +LG  + F       +   Y+ G+SY G  +P +   +   N        +++G +  +PS   +V
Sbjct:   23 TDSASIVKSLPGFDGPLP---FELETGYIGV-----GEEEEVQLFYYFIKSERNPQEDPLLLWLSGGPGCSSISGLLYENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPSDSGEAKRIHEFLHKWLGKHQEF------SSNPFYVGGDSYCGMVIPALVQEISKGNYVCCKPPINLQGYILGNPSTENEV 221          
The following BLAST results are available for this feature:
BLAST of FC878030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
YUA6_CAEEL3.399e-1628.41Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
SCP14_ARATH3.399e-1625.79Serine carboxypeptidase-like 14 OS=Arabidopsis tha... [more]
SCP8_ARATH4.439e-1628.07Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP49_ARATH4.439e-1632.00Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
SCP13_ARATH4.439e-1629.45Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
SCP16_ARATH5.798e-1627.32Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
CBP1_HORVU5.798e-1629.70Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
YSS2_CAEEL9.890e-1632.19Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
SCP29_ARATH9.890e-1628.35Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP7_ARATH1.292e-1525.82Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878030 ID=FC878030; Name=FC878030; organism=Citrus clementina; type=EST; length=890bp
CACAGCACGAGCTTGACTTCCAACTAATCCCGGCACTGCGATCGCGAAGA
TGCAGCTTCTTTCACTCCTCGCTGTTGGTGGCCTCACAGCCAGTGTTTCT
GCCCGAAGCGCTCGCTCTGTTGGCAAGAAGAATGAGCTCCCTCGTCCTCG
TTTGACTGTTCCAGAATCGAGCCTTCATCCCCACAAGCGTCAGAGCACTC
AGATCATCACTACCGAGGCCTCCAAGTCTTTCGCTGTCAACGGAACTGCT
GGAGCAATCCCCGACGTCGATTTTGACATTGGCGAGTCTTACGCTGGTCT
TTTACCTATCAGCAAAGCTGCTAATGAGACCTCTGAACTGTACTTCTGGT
TCTTCCCATCCGAGAACCCTGATGCGAGTGACGAGATCACCATCTGGCTG
AACGGTGGTCCAGGTTGCTCATCTCTTGAAGGATTTCTTCAAGAGAACGG
ACCGATCTCATGGCAGTACGGTTCCGGACCAGCCGCTGTTTACAACCCCT
GGAATTGGGCAAACCTCACCAACATGGTCTGGGTTGAGCAGCCAGTGGGC
ACTGGATTCACCCAAGGCAATGCTACTGCCACCTCTCAGGAGGAGACCGC
TGAGGAATTCCTTGGCTTCTTCAAGAACTTTGTTGATACATTCGGTCTGC
AGAACCGCAAGGTGTACATCACTGGCGAGTCATACGCCGGACGCTACGTC
CCTTACATCGCGGATGCCATGTTGAGCAAAAACGACTCTACCTACTACGA
TGTGAAGGGTATCATGTTTTACGACCCCAGTGTAGCTGAGGATGTTCTTC
TTGAGGATATTCCCGCTGTTGCCTTTGTCGACAAATGGGCTGGTCTCTTT
CACTTTAACCAGACCTTCATGGACGATATCCATAACCGCT
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