FC878030

Overview
NameFC878030
Unique NameFC878030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6987 contig Ccv1_Contig6987:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 54/180 (30.00%), Postives = 86/180 (47.78%), Query Frame = 2
Query:  245 TAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQN-----RKVYITGESYAGRYVPYIADAM---LSKNDSTYYDVKG 760
            T   +P+   D+G  +AG     +  N      F+FF        D + IWL GGPGCSS      ENGP +    +  + V+N + W  ++N+++V+QP GTGF+  +                + +F+  F  ++        +ITGESYAG Y+P  A  +     KN+ T+ ++KG
Sbjct:   80 TLPGLPEGVADLGH-HAGYY---RLPNTHDARMFYFFFESRGKKEDPVVIWLTGGPGCSSELAVFYENGPFT--IANNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLY-DFLQVFFKKHPEFIKNDFFITGESYAGHYIPAFASRVHQGNKKNEGTHINLKG 252          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15
Identity = 52/162 (32.10%), Postives = 83/162 (51.23%), Query Frame = 2
Query:  329 TSELYFWFFP--SENPDASDEITIWLNGGPGCSSL-EGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTF-----GLQNRKVYITGESYAGRYVPYIADAMLSKN----DSTYYDVKGIMFYDP 778
            T  L+FWFF   SE+P ++  + +WLNGGPGCSS+  G   E GP      +G +  +N ++W    NM+++E PVG GF+  N                  NF+  +       ++R  +I GESYAG Y P +A+ +  +N      ++ ++KG +  +P
Sbjct:   59 TRSLFFWFFEALSESP-STRPLVLWLNGGPGCSSIGYGAASELGPFR-VVENGTSLSFNQYSWVQEANMLFLESPVGVGFSYTNSSSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFFIAGESYAGHYSPQLAELIYDRNKVQPKDSFINLKGFIVGNP 218          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15
Identity = 47/162 (29.01%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQG---NXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVP 703
            G  G++P   F++   Y G+        E  +L+++F  SE     D + +WL+GGPGCSS+ G L ENGP++ +     G+ P+ V   ++W   ++M++++QPVGTGF+                     F + ++       +   Y+ G+SY+G  VP
Sbjct:   37 GFEGSLP---FELETGYIGI-----GEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSISGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPVGTGFSYSRTQQYNKPSDSGEAKRIHEFLQKWLSKHQEFSSNPFYVAGDSYSGMVVP 190          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15
Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFG----LQNRKVYITGESYAGRYVP 703
            G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL GGPGCSS+ G L ENGP++ +     G+ P+ V   ++W   ++M++++QPVGTGF+                    +      G      +   Y+ G+SY+G  VP
Sbjct:   38 GFEGPLP---FELETGYIGI-----GEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSSISGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQQFNKPSDSGEAKRIHEFLQKWLGKHQEFSSNPFYVAGDSYSGLVVP 191          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBPX_ORYSJ (Serine carboxypeptidase-like OS=Oryza sativa subsp. japonica GN=CBP31 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.908e-15
Identity = 47/144 (32.64%), Postives = 69/144 (47.92%), Query Frame = 2
Query:  332 SELYFWFFPSENPDASDE-ITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN------XXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDST 742
            + L+++FF S      D+ + IWL GGPGCSS      ENGP  +      + V+N + W   +N+++V+QP GTGF+  +                  FL  F  F +         YITGESYAG Y+P  A  +   N ++
Sbjct:   29 ARLFYFFFESRGSKGEDDPVVIWLTGGPGCSSELALFYENGP--FHIADNMSLVWNDFGWDQESNLIYVDQPTGTGFSYSSNPRDTRHDEAGVSNDLYAFLQAF--FTEHPNFAKNDFYITGESYAGHYIPAFASRVYKGNKNS 168          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 50/165 (30.30%), Postives = 80/165 (48.48%), Query Frame = 2
Query:  293 AGLLPISKAANETSELYFWFFPSENPDA---SDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVY-NPWNWANLTNMVWVEQPVGTGFT----QGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGI 763
            +G LP+  A    S +++ F+ ++ P        + +WL GGPGCSS+ G   E GP  W+  S    +  NP  W  L  +++V+ P+G GF+    Q +            +    +        +NR VY TGESYAG+YVP I   +L +  +   ++KG+
Sbjct:   37 SGYLPVKPAPG--SSMFYAFYEAQEPTTPLPDTPLLVWLQGGPGCSSMIGNFYELGP--WRVVSRATDLERNPGAWNRLFGLLFVDNPIGVGFSIAASQQDIPTNQRQVAEHLYAALVEFLEQNPSFENRPVYFTGESYAGKYVPAIGYYILKEKPNGKVNLKGL 197          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 52/187 (27.81%), Postives = 90/187 (48.13%), Query Frame = 2
Query:  251 GAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF----TQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKN---DSTYYDVKGIMFYDPSV 784
            G  P+++F     ++G + +  AA     L++W   +  P  +  + +WLNGGPGCSS+  G  +E GP       G     N + W  + N+++++ P G GF    T  +               F   +++ F   + R  YI GESYAG Y+P +A  ++++N    +   ++KGI+  +P V
Sbjct:   43 GQPPNLNFS---QFSGYVTVDPAAGRA--LFYWLTEAPRPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVN-PDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPELAQLIVNRNKGAKNPTINLKGILMGNPLV 223          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 53/186 (28.49%), Postives = 89/186 (47.85%), Query Frame = 2
Query:  290 YAGLLP-------ISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQ---YGSG-PAAVYNPWNWANLTNMVWVEQPVGTGF----TQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDSTY---YDVKGIMFYDPSVAED 793
            + GLLP       I     E  +L+++F  SEN    D + IWL GGP C++L     E GP++++   Y  G P+ V   ++W  + ++++++QPVGTG+    T  +            +    K  V+     +  +Y+ G+SYAG  VP I   +   N+  Y    ++KG +  +PS   D
Sbjct:   35 FEGLLPFHLETGYIGVGEGEKVQLFYYFIKSENNPEEDPLIIWLTGGPACTALSALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPLSYKPSDTGEAKQTYEFLQKWLVENPQFVSNPIYVGGDSYAGIVVPAIVQQISIGNEHGYKPQINLKGYILGNPSTDLD 220          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 49/176 (27.84%), Postives = 81/176 (46.02%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQ----YGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTF--------GLQNRKVYITGESYAGRYVPYIADAMLSKN 733
            G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL+GGPGCSS+ G L ENGP++ +     GS P+ V   ++W    N+++++QP+G GF+                 G  KN  +             +   Y +G+SY+G  VP +   +   N
Sbjct:   30 GFEGPLP---FELETGYIGI-----GEEEDVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSITGLLFENGPLALKSKVYNGSVPSLVSTTYSWTKTANIIFLDQPIGAGFSYSRIPLIDTPSD----TGEVKNIHEFLQKWLSKHPQFSSNPFYASGDSYSGMIVPALVQEISKGN 193          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14
Identity = 46/162 (28.40%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFG----LQNRKVYITGESYAGRYVP 703
            G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL+GGPGCSS+ G L ENGP++ +     G+ P+ V   ++W   ++M++++QPVG GF+                    +      G      +   Y+ G+SY+G  VP
Sbjct:   38 GFEGPLP---FELETGYIGV-----GEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSISGLLFENGPLAMKLDVYNGTLPSLVSTTYSWTKASSMIFLDQPVGAGFSYSRTQLLNKPSDSGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGMVVP 191          
The following BLAST results are available for this feature:
BLAST of FC878030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
CBP3_HORVU1.292e-1530.00Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
SCP33_ARATH2.203e-1532.10Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP5_ARATH2.877e-1529.01Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]
SCP2_ARATH2.877e-1529.01Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
CBPX_ORYSJ4.908e-1532.64Serine carboxypeptidase-like OS=Oryza sativa subsp... [more]
SCP50_ARATH8.372e-1530.30Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]
SCP28_ARATH8.372e-1527.81Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP18_ARATH1.093e-1428.49Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP12_ARATH1.093e-1427.84Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
SCP3_ARATH1.428e-1428.40Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878030 ID=FC878030; Name=FC878030; organism=Citrus clementina; type=EST; length=890bp
CACAGCACGAGCTTGACTTCCAACTAATCCCGGCACTGCGATCGCGAAGA
TGCAGCTTCTTTCACTCCTCGCTGTTGGTGGCCTCACAGCCAGTGTTTCT
GCCCGAAGCGCTCGCTCTGTTGGCAAGAAGAATGAGCTCCCTCGTCCTCG
TTTGACTGTTCCAGAATCGAGCCTTCATCCCCACAAGCGTCAGAGCACTC
AGATCATCACTACCGAGGCCTCCAAGTCTTTCGCTGTCAACGGAACTGCT
GGAGCAATCCCCGACGTCGATTTTGACATTGGCGAGTCTTACGCTGGTCT
TTTACCTATCAGCAAAGCTGCTAATGAGACCTCTGAACTGTACTTCTGGT
TCTTCCCATCCGAGAACCCTGATGCGAGTGACGAGATCACCATCTGGCTG
AACGGTGGTCCAGGTTGCTCATCTCTTGAAGGATTTCTTCAAGAGAACGG
ACCGATCTCATGGCAGTACGGTTCCGGACCAGCCGCTGTTTACAACCCCT
GGAATTGGGCAAACCTCACCAACATGGTCTGGGTTGAGCAGCCAGTGGGC
ACTGGATTCACCCAAGGCAATGCTACTGCCACCTCTCAGGAGGAGACCGC
TGAGGAATTCCTTGGCTTCTTCAAGAACTTTGTTGATACATTCGGTCTGC
AGAACCGCAAGGTGTACATCACTGGCGAGTCATACGCCGGACGCTACGTC
CCTTACATCGCGGATGCCATGTTGAGCAAAAACGACTCTACCTACTACGA
TGTGAAGGGTATCATGTTTTACGACCCCAGTGTAGCTGAGGATGTTCTTC
TTGAGGATATTCCCGCTGTTGCCTTTGTCGACAAATGGGCTGGTCTCTTT
CACTTTAACCAGACCTTCATGGACGATATCCATAACCGCT
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