FC878030

Overview
NameFC878030
Unique NameFC878030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6987 contig Ccv1_Contig6987:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCPL1_DICDI (Serine carboxypeptidase S10 family member 1 OS=Dictyostelium discoideum GN=DDB_G0291912 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = 2
Query:  323 NETSE--LYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFT---QGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNR-KVYITGESYAGRYVPYIADAMLSKN 733
            NET+   L++ F+ S+N  ++D + +WL GGPGCSSL     ENGP  +          NP +W  + N+++V+ P+G GF+     +               F   F+  +   ++  +YI GESYAG YVP  +  +  KN
Sbjct:   33 NETTNANLFYLFYESQNSPSTDPLILWLTGGPGCSSLMAAFYENGP--YFVNDNLTLSENPNSWNMVANVLYVDSPLGAGFSYVVDSDGYSTTETEISENLYSFLTQFLSKYPKYSKLPLYIFGESYAGHYVPSFSYYIYQKN 173          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 48/170 (28.24%), Postives = 81/170 (47.65%), Query Frame = 2
Query:  218 ASKSFAVNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFG----LQNRKVYITGESYAGRYVP 703
            AS   ++ G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL GGPGCS++ G L ENGP++ +     G+ P+ V   ++W   ++M++++QPVGTGF+                    +      G      +   Y+ G+SY+G  VP
Sbjct:   30 ASVVKSLPGFEGPLP---FELETGYIGV-----GEEEEVQLFYYFIKSERNPKEDPLLLWLTGGPGCSAISGLLYENGPLTMKLDVYNGTLPSLVSTTYSWTKNSSMIFLDQPVGTGFSYSRTELFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGITVP 191          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 45/162 (27.78%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFG----LQNRKVYITGESYAGRYVP 703
            G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL GGPGCS++ G L +NGP++ +     G+ P+ V   ++W   ++M++++QPVGTGF+                    +      G      +   Y+ G+SY+G  VP
Sbjct:   38 GFEGPLP---FELETGYIGV-----GEEEEVQLFYYFIKSERNPKEDPLLLWLTGGPGCSAISGLLYQNGPLAMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQLFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGLVVP 191          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14
Identity = 47/153 (30.72%), Postives = 75/153 (49.02%), Query Frame = 2
Query:  284 ESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF-----TQGNXXXXXXXXXXXXFLGFFKNF-VDTFGLQNRKVYITGESYAGRYVPYIADAML 724
            +SY+G +  +  AN T ++++    S +   +D + +W NGGPGCSSL G  +E GP    +  G     NP+ W    N++++E P+G G+     T G             +      F V      NR  Y++GESYAG Y+P + D ++
Sbjct:   37 KSYSGYVDAN--ANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLGGLFEELGPFYVNF-DGQTLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQNYQALTNFFNVAQPKYTNRTFYLSGESYAGIYIPMLTDLIV 186          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14
Identity = 45/162 (27.78%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFG----LQNRKVYITGESYAGRYVP 703
            G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL GGPGCS++ G L ENGP++ +     G+ P+ V   ++W   +++++++QPVGTGF+                    +      G      +   Y+ G+SY+G  VP
Sbjct:   38 GFEGQLP---FELETGYIGV-----GEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSAISGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPSDSGEAKRIHEFLQKWLGKHQVFSSNPFYVAGDSYSGLVVP 191          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP11_ARATH (Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14
Identity = 52/195 (26.67%), Postives = 90/195 (46.15%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQ----YGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN---XXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKN---DSTYYDVKGIMFYDPSVAED 793
            G  G +P   F++   Y G+        E  +L+++F  SE     D + +WL+GGPGCSS+ G L +NGP++ +     GS P+ V   ++W    N+++++QPVG GF+                     F + ++       +   Y  G+SY+G  VP +   +   N    +   ++KG +  +P   ED
Sbjct:   30 GFEGPLP---FELETGYIGI-----GEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSITGLLFQNGPLALKSEVYNGSVPSLVSTTYSWTKTANIIFLDQPVGAGFSYSRAPLIDTPTDTGEVKRIHEFLQKWLSKHPQFSSNHFYAGGDSYSGMIVPALVQEISKGNYICCNPPINLKGYVLGNPITHED 216          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14
Identity = 47/173 (27.17%), Postives = 81/173 (46.82%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQ----YGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQ-----NRKVYITGESYAGRYVPYIADAMLSKN 733
            G  G +P   F++   Y G+        E  + +++F  S+     D + IWLNGGPGCS L G   ENGP++ +     GS P+ V   ++W    N+++++QPVG+GF+                +     F+  + ++     +   Y+ G+SY+G  VP +   +   N
Sbjct:   30 GFKGPLP---FELETGYIGI-----GEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSE--VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGN 192          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBP3_WHEAT (Serine carboxypeptidase 3 OS=Triticum aestivum GN=CBP3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14
Identity = 52/180 (28.89%), Postives = 84/180 (46.67%), Query Frame = 2
Query:  245 TAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQN-----RKVYITGESYAGRYVPYIADAM---LSKNDSTYYDVKG 760
            T   +P+   D+G  +AG     +  N      F+FF        D + IWL GGPGCSS      ENGP +    +  + V+N + W  ++N+++V+   GTGF+  +                + +F+  F  ++        +ITGESYAG Y+P  A  +     KN+ T+ ++KG
Sbjct:   73 TLPGLPEGVGDLGH-HAGYY---RLPNTHDARMFYFFFESRGKKEDPVVIWLTGGPGCSSELAVFYENGPFT--IANNMSLVWNKFGWDKISNIIFVDPATGTGFSYSSDDRDTRHDEAGVSNDLY-DFLQVFFKKHPEFVKNDFFITGESYAGHYIPAFASRVHQGNKKNEGTHINLKG 245          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13
Identity = 49/196 (25.00%), Postives = 92/196 (46.94%), Query Frame = 2
Query:  242 GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQ----YGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN---XXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKN---DSTYYDVKGIMFYDPSVAEDV 796
            G  G +P   F++   Y G+        E  +++++F  SE+    D + +WL+GGP CSS    + ENGPI+++     GS P+ V   + W  + ++++++QPVGTGF+                     F   ++D      +  +Y+ G SY+G  +P I   + + N        +++G +  +P+   D+
Sbjct:   35 GFQGPLP---FELETGYIGV-----GEAEKDQMFYYFIKSESNPEKDPLLLWLSGGPFCSSFTALIYENGPIAFKAEEYNGSIPSLVSTTYAWTKVASILYLDQPVGTGFSYSRNPLADIPSDTGVAKPVNEFLHKWLDKHPEFLSNPLYVAGNSYSGIVIPTIVQEISNGNHLDSKPQINLQGFVLGNPATDTDI 222          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBP3_ORYSJ (Serine carboxypeptidase 3 OS=Oryza sativa subsp. japonica GN=CBP3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 43/147 (29.25%), Postives = 68/147 (46.26%), Query Frame = 2
Query:  344 FWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTF-----GLQNRKVYITGESYAGRYVPYIADAM---LSKNDSTYYDVKG 760
            F+F         D + IWL GGPGCSS      ENGP +    +  +  +N + W  ++N+++V+QP GTGF+  +                + +F+  F            +ITGESYAG Y+P  A  +      N+  + ++KG
Sbjct:  102 FYFLFESRGKKEDPVVIWLTGGPGCSSELAVFYENGPFT--ISNNMSLAWNKFGWDTISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLY-SFLQVFFKKHPEFAKNDFFITGESYAGHYIPAFASRVHQGNKANEGIHINLKG 245          
The following BLAST results are available for this feature:
BLAST of FC878030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
SCPL1_DICDI1.865e-1432.17Serine carboxypeptidase S10 family member 1 OS=Dic... [more]
SCP6_ARATH1.865e-1428.24Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]
SCP4_ARATH1.865e-1427.78Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
YPP3_CAEEL2.436e-1430.72Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
SCP1_ARATH2.436e-1427.78Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCP11_ARATH2.436e-1426.67Serine carboxypeptidase-like 11 OS=Arabidopsis tha... [more]
SCP9_ARATH3.181e-1427.17Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
CBP3_WHEAT7.087e-1428.89Serine carboxypeptidase 3 OS=Triticum aestivum GN=... [more]
SCP17_ARATH1.209e-1325.00Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
CBP3_ORYSJ7.836e-1329.25Serine carboxypeptidase 3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878030 ID=FC878030; Name=FC878030; organism=Citrus clementina; type=EST; length=890bp
CACAGCACGAGCTTGACTTCCAACTAATCCCGGCACTGCGATCGCGAAGA
TGCAGCTTCTTTCACTCCTCGCTGTTGGTGGCCTCACAGCCAGTGTTTCT
GCCCGAAGCGCTCGCTCTGTTGGCAAGAAGAATGAGCTCCCTCGTCCTCG
TTTGACTGTTCCAGAATCGAGCCTTCATCCCCACAAGCGTCAGAGCACTC
AGATCATCACTACCGAGGCCTCCAAGTCTTTCGCTGTCAACGGAACTGCT
GGAGCAATCCCCGACGTCGATTTTGACATTGGCGAGTCTTACGCTGGTCT
TTTACCTATCAGCAAAGCTGCTAATGAGACCTCTGAACTGTACTTCTGGT
TCTTCCCATCCGAGAACCCTGATGCGAGTGACGAGATCACCATCTGGCTG
AACGGTGGTCCAGGTTGCTCATCTCTTGAAGGATTTCTTCAAGAGAACGG
ACCGATCTCATGGCAGTACGGTTCCGGACCAGCCGCTGTTTACAACCCCT
GGAATTGGGCAAACCTCACCAACATGGTCTGGGTTGAGCAGCCAGTGGGC
ACTGGATTCACCCAAGGCAATGCTACTGCCACCTCTCAGGAGGAGACCGC
TGAGGAATTCCTTGGCTTCTTCAAGAACTTTGTTGATACATTCGGTCTGC
AGAACCGCAAGGTGTACATCACTGGCGAGTCATACGCCGGACGCTACGTC
CCTTACATCGCGGATGCCATGTTGAGCAAAAACGACTCTACCTACTACGA
TGTGAAGGGTATCATGTTTTACGACCCCAGTGTAGCTGAGGATGTTCTTC
TTGAGGATATTCCCGCTGTTGCCTTTGTCGACAAATGGGCTGGTCTCTTT
CACTTTAACCAGACCTTCATGGACGATATCCATAACCGCT
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