FC878030

Overview
NameFC878030
Unique NameFC878030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6987 contig Ccv1_Contig6987:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12
Identity = 49/174 (28.16%), Postives = 81/174 (46.55%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF----TQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIM 766
            P+VDFD+   Y+G + + +AA  +        P E   A   + +WLNGGPGCSS+     E          G   V N + W  + N+++++ P G GF    T  +               F   + + F   + R+ Y+ GESYAG YVP ++  ++ ++ +   ++KG M
Sbjct:   50 PEVDFDM---YSGYITVDEAAGRSLFYLLQEAPEEAQPAP--LVLWLNGGPGCSSVAYGASEELGAFRVMPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFYVAGESYAGHYVPELSQ-LVHRSGNPVINLKGFM 217          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CPVL_DICDI (Probable serine carboxypeptidase CPVL OS=Dictyostelium discoideum GN=cpvl PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.337e-12
Identity = 47/173 (27.17%), Postives = 83/173 (47.98%), Query Frame = 2
Query:  287 SYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFT-------QGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDST---YYDVKGIMFYD 775
            ++ G + +++  N  S  +FWF  S+N D +  + I+L GGPG +S      E GP  ++       V     W +   M++++ PVGTGF+         N               F+K + + +     ++YITGESYAG+Y+P  +  ++ +N ++     ++KGI   D
Sbjct:  102 TFTGFITVNETYN--SNTFFWFLESQNGDKNSPLVIFLQGGPGGASTFSLFVETGP--YELLDNFTLVQREITWNSEFAMLYIDNPVGTGFSFTDSQEGYSNNEDEIATNLYTFLQQFYKLYPEYY---TNELYITGESYAGKYIPAFSYHIIQQNQNSNNPNINLKGIAIGD 267          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 52/177 (29.38%), Postives = 87/177 (49.15%), Query Frame = 2
Query:  236 VNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDE----ITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNP-WNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLG----FFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKN 733
            ++   G   +VDF     Y+G + + +       L++W    E+P A D     + +WLNGGPGCSS+  G  +E GP  ++ GS    +++  + W  L N++++E P G GF+  N                   F  N+ + F   ++R+ YI GESYAG +VP ++  +  +N
Sbjct:   34 ISNLPGQPSNVDF---RQYSGYVTVHEERGRA--LFYWLV--ESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGP--FRVGSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQLSKLVHERN 201          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 52/179 (29.05%), Postives = 84/179 (46.93%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSL-EGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF----TQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAM----LSKNDSTYYDVKGIM 766
            P V F     ++G + ++++   +  L++W   S +   +  + +WLNGGPGCSS+  G  +E GP      +G     N + W    N++++E P G GF    T  +             L F   ++  F   Q R  YI GESYAG YVP +A  +     + N++   ++KG M
Sbjct:   38 PQVGFS---QFSGYVTVNESHGRS--LFYWLTESPSSSHTKPLLLWLNGGPGCSSIGYGASEEIGPFRIN-KTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIFLIKWMSRFPQYQYRDFYIVGESYAGHYVPQLAKKIHLYNKAFNNTPIINLKGFM 210          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 51/176 (28.98%), Postives = 83/176 (47.16%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDE-ITIWLNGGPGCSSLE-GFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGF----TQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIM 766
            P VDFD+   Y+G + + + A  +    F+       DA    + +WLNGGPGCSS+  G  +E G    +   G   V N + W  + N+++++ P G GF    T  +               F   + + F   + R  YI GESYAG YVP ++  ++ ++ +   ++KG M
Sbjct:   18 PAVDFDM---YSGYITVDEGAGRS---LFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVK-PRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQ-LVHRSKNPVINLKGFM 185          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 2
Query:  323 NETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFT 562
            N +   +FWFF +     +  ++IWLNGGPG SS+ G  QENGP      S  +   NP++W N  NM++++QP   GF+
Sbjct:   77 NYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCMVNNDSN-STTNNPYSWNNKVNMLYIDQPNQVGFS 155          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SPCA_TRIRU (Carboxypeptidase S1 homolog A OS=Trichophyton rubrum GN=SCPA PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 2
Query:  323 NETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFT 562
            N +   +FWFF +     +  ++IWLNGGPG SS+ G  QENGP  W      +   N ++W N  NM++++QP   GF+
Sbjct:   77 NYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGP-CWVNEDSKSTTNNSFSWNNKVNMLYIDQPNQVGFS 155          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SPCA_TRIEQ (Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 2
Query:  323 NETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFT 562
            N +   +FWFF +     +  ++IWLNGGPG SS+ G  QENGP  W      +   N ++W N  NM++++QP   GF+
Sbjct:   77 NYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGP-CWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFS 155          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 2
Query:  323 NETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFT 562
            N +   +FWFF +     +  ++IWLNGGPG SS+ G  QENGP  W      +   N ++W N  NM++++QP   GF+
Sbjct:   77 NYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGP-CWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFS 155          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11
Identity = 39/131 (29.77%), Postives = 67/131 (51.15%), Query Frame = 2
Query:  335 ELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQ----YGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFL---GFFKN-FVDTFGLQNRKVYITGESYAGRYVP 703
            EL+++F  SE    +D + IWL GGPGCSS+ G L  NGP++++     G+ P      ++W  + N++++E P G+G++                     F ++ FV      +   Y+ G+SY+G+ VP
Sbjct:   55 ELFYYFVKSERNPENDPLMIWLTGGPGCSSICGLLFANGPLAFKGDEYNGTVPPLELTSFSWTKVANILYLEAPAGSGYSYAKTRRAFESSDTKQMHQIDQFLRSWFVKHPEFISNPFYVGGDSYSGKIVP 185          
The following BLAST results are available for this feature:
BLAST of FC878030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
CBP2_HORVU1.023e-1228.16Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
CPVL_DICDI1.337e-1227.17Probable serine carboxypeptidase CPVL OS=Dictyoste... [more]
SCP27_ARATH3.889e-1229.38Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP23_ARATH5.079e-1229.05Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
CBP2_WHEAT5.079e-1228.98Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SPCA_NANOT6.634e-1240.00Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
SPCA_TRIRU1.132e-1138.75Carboxypeptidase S1 homolog A OS=Trichophyton rubr... [more]
SPCA_TRIEQ1.132e-1138.75Carboxypeptidase S1 homolog A OS=Trichophyton equi... [more]
SCPA_TRITO1.132e-1138.75Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
SCP19_ARATH1.478e-1129.77Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878030 ID=FC878030; Name=FC878030; organism=Citrus clementina; type=EST; length=890bp
CACAGCACGAGCTTGACTTCCAACTAATCCCGGCACTGCGATCGCGAAGA
TGCAGCTTCTTTCACTCCTCGCTGTTGGTGGCCTCACAGCCAGTGTTTCT
GCCCGAAGCGCTCGCTCTGTTGGCAAGAAGAATGAGCTCCCTCGTCCTCG
TTTGACTGTTCCAGAATCGAGCCTTCATCCCCACAAGCGTCAGAGCACTC
AGATCATCACTACCGAGGCCTCCAAGTCTTTCGCTGTCAACGGAACTGCT
GGAGCAATCCCCGACGTCGATTTTGACATTGGCGAGTCTTACGCTGGTCT
TTTACCTATCAGCAAAGCTGCTAATGAGACCTCTGAACTGTACTTCTGGT
TCTTCCCATCCGAGAACCCTGATGCGAGTGACGAGATCACCATCTGGCTG
AACGGTGGTCCAGGTTGCTCATCTCTTGAAGGATTTCTTCAAGAGAACGG
ACCGATCTCATGGCAGTACGGTTCCGGACCAGCCGCTGTTTACAACCCCT
GGAATTGGGCAAACCTCACCAACATGGTCTGGGTTGAGCAGCCAGTGGGC
ACTGGATTCACCCAAGGCAATGCTACTGCCACCTCTCAGGAGGAGACCGC
TGAGGAATTCCTTGGCTTCTTCAAGAACTTTGTTGATACATTCGGTCTGC
AGAACCGCAAGGTGTACATCACTGGCGAGTCATACGCCGGACGCTACGTC
CCTTACATCGCGGATGCCATGTTGAGCAAAAACGACTCTACCTACTACGA
TGTGAAGGGTATCATGTTTTACGACCCCAGTGTAGCTGAGGATGTTCTTC
TTGAGGATATTCCCGCTGTTGCCTTTGTCGACAAATGGGCTGGTCTCTTT
CACTTTAACCAGACCTTCATGGACGATATCCATAACCGCT
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