FC878033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: EIF3F_MAGGR (Eukaryotic translation initiation factor 3 subunit F OS=Magnaporthe grisea GN=MGG_10653 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.464e-22 Identity = 82/289 (28.37%), Postives = 140/289 (48.44%), Query Frame = 3 Query: 96 SAATSNVTAKVHPLVIFNICDCYVRRP---DQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCR----EVPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ--FQEIP--------LDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKLNTA 905 +A + +T + P I +I D VRR QA RVIG L+G DGT V++R+++ +PH E DQV +D+EY ML LK +P+E ++GW++T + SALI F+ P+P VHLT+ T + + Y+S ++ + A F ++P D +EA G D T+ + SD+E + +E+ + +++ +YV ++ P +++G+ L ++ PK+ + + N RTQ+ LA++L A Sbjct: 23 NANVAPLTVTIQPQAILSILDHAVRRDIRDTQATRVIGALVGVRSEDGTDVEVRSTFAIPHTENEDQVEVDVEYQKNMLALTLKASPRESLLGWYTTSHELNSFSALIQNFFASPETGTFPHPAVHLTMSTD-PGADIEPRCYISAPAAVSPDRAAESCFFIQVPHRTPPTNESDRAALEAIAAGKDDEARTA--PVLSDVEALARSLEQTIDMLDRTSEYVGAVLDEEREPSHALGQYLMNNLSLAPKVDSVSIEHDFNNHIQDVLMVSYLTNTIRTQVDLAQRLALA 308
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: EIF3F_CAEEL (Eukaryotic translation initiation factor 3 subunit F OS=Caenorhabditis elegans GN=eif-3.F PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21 Identity = 79/293 (26.96%), Postives = 132/293 (45.05%), Query Frame = 3 Query: 108 SNVTAKVHPLVIFNICDCYVRRPDQA------ERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYC---------REVPNPVHLTVDTGFRNGEG---TVKAYVSVNLSL--GDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDK-----LPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVP-DNSVGRILSETV-ASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKLNTA 905 SN+T VHP V N+ D ++RR + E+ +GTL+G G++ + N + +P NE +D + +D +++ M+ + K +P E VGWF T +T + H++Y RE P V LT+DT F V+AY+ + A F + ++L E V +++ + L S LE +E +++ + + YV+D + P D +GR L + V AS + P D LV +T+TQL + E+L +A Sbjct: 3 SNLTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMG-YYEKGSIQVTNCFAIPFNESNDDLEIDDQFNQQMISALKKTSPNEQPVGWFLTTSDITSSCLIYHDYYVRVITEASARRESPPIVVLTIDTTFSGDMSKRMPVRAYLRSKAGIPGAAGPHCAIFNPLRVELAAFPGELVAMQLIEKALDSRRREATLESGLEQLETSTAQMIEWLERMLHYVEDVNKNGEKPGDAQIGRQLMDIVTASSNNMQPEKLDTLVKNTLRDYVMVSYLAKLTQTQLQVHERLVSA 294
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.049e-20 Identity = 67/237 (28.27%), Postives = 115/237 (48.52%), Query Frame = 3 Query: 126 VHPLVIFNICDCYVR-RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSV-NLSLGDRQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDK 809 VHP V+ ++ D Y R D +RV+G LLGS G VD+ N Y +P E LD +H M K+N +E +VGW+STG + I+E + R PNPV + +D + K+YV+V ++ + +FQ IP + +EAE + + L K +S+ L + + ++ ++ LLT + ++ Y+ +G P++ + + + + P L+ K Sbjct: 10 VHPTVLLSVVDHYNRVAKDTNKRVVGALLGSN-NKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINKDTSESTMRFQHIPSSIDAVEAEEICIEHLLRDVKDSSISSLTTQITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQIIGYIQDIINLSPNLNANEISK 245
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 69/232 (29.74%), Postives = 113/232 (48.71%), Query Frame = 3 Query: 126 VHPLVIFNICDCYVR-RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ--FQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLS 791 VHPLV+ +I D Y R D ++RV+G LLGS G VD+ NSY VP E + LD YH +M ++N +E +VGW+STG + +H + VPNPV + +D + KAY +V + +Q F + ++ E E +G + L K T++ L +++ ++ L + +I Y+D +EG+ ++ + L + LP L+ Sbjct: 19 VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSS-SRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLN 249
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: PSD7_DROME (26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6) HSP 1 Score: 85.5001 bits (210), Expect = 4.563e-16 Identity = 65/236 (27.54%), Postives = 112/236 (47.46%), Query Frame = 3 Query: 126 VHPLVIFNICDCYVR--RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ-FQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAF 803 VHPLV+ ++ D + R + +RV+G LLG G +D+ NS+ VP +E + LD +Y M KVN +E +VGW+ TG + I+E R PN V + +D ++ +AY+SV D ++ F+ +P ++ EAE VG + L K T+V L + + ++ L + DI +Y+ + + ++ + L + LP ++ F Sbjct: 13 VHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQF 248
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: PSD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14 Identity = 70/242 (28.93%), Postives = 115/242 (47.52%), Query Frame = 3 Query: 126 VHPLVIFNICDCYVR--RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGD-RQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSV----DKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDK 809 VHPLV+ ++ D + R + +RV+G LLGS +D+ NS+ VP +E + LD +Y M KVN +E IVGW+ TG + I+E R PN V + +D ++ +AY+SV D + F+ + ++ EAE VG + L K T+V ++ + + G++ L +LL DI Y++ G+ ++ + L + LP +S F K Sbjct: 11 VHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS-WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL----DIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVK 247
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: CSN6_DICDI (COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum GN=csn6 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14 Identity = 73/278 (26.26%), Postives = 121/278 (43.53%), Query Frame = 3 Query: 96 SAATSNVTAKVHPLVIFNICDCYVRRPDQAE-----RVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD-ILKSTSVDKLPSDLEGMEVLMERLLTLINDIYK----YVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKLN 899 SA +S + +HPLV+ NI D + R Q+ RVIG +LG V V+I NS+ + + Q+ LDIEY + K + ++ P ++GW+STG V+ L+H+ +P++L +DT + L + + + F + P ++ EAER+G + I K T S L M ++++N K Y+ E R + ++ R S LP + F K IT+T SL + ++ Sbjct: 20 SANSSGLEVDLHPLVLINISDHFTRTKVQSNYQDNCRVIGVILG-VQNGRNVEICNSFEMVYATVDKQLVLDIEY---LRKKYEQLFPLYDLLGWYSTGSQVSKDDILLHKQISEHNESPLYLMLDTDSPKSKDLPVIIYESELHIVNDEPTTIFVKTPYKIQTGEAERIGVNHIAKVTPSGSEGSGLTSHLFTMHNAISMLNIRVKALSDYLQAVKEKRLPYEQNILRKASSLCNQLPTIDTHDFKKSYLQEYNDVLLVTYLASITKTSASLNDTID 293
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: PSD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.504e-14 Identity = 70/242 (28.93%), Postives = 114/242 (47.11%), Query Frame = 3 Query: 126 VHPLVIFNICDCYVR--RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGD-RQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSV----DKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDK 809 VHPLV+ ++ D + R + +RV+G LLGS +D+ NS+ VP +E + LD +Y M KVN +E IVGW+ TG + I+E R PN V + +D ++ +AY+SV D + F+ + ++ EAE VG + L K T+V ++ + + G++ L +LL DI Y++ G+ ++ + L + LP S F K Sbjct: 11 VHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS-WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL----DIRSYLEKVASGKLPINHQIIYQLQDVFNLLPDASLQEFVK 247
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: PSD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.270e-14 Identity = 70/242 (28.93%), Postives = 115/242 (47.52%), Query Frame = 3 Query: 126 VHPLVIFNICDCYVR--RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGD-RQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSV----DKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDK 809 VHPLV+ ++ D + R + +RV+G LLGS +D+ NS+ VP +E + LD +Y M KVN +E IVGW+ TG + I+E R PN V + +D ++ +AY+SV D + F+ + ++ EAE VG + L K T+V ++ + + G++ L +LL DI Y++ G+ ++ + L + LP +S F K Sbjct: 11 VHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS-WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL----DIRGYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVK 247
BLAST of FC878033 vs. ExPASy Swiss-Prot
Match: RPN8_NEUCR (26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa GN=rpn-8 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.514e-14 Identity = 65/241 (26.97%), Postives = 111/241 (46.06%), Query Frame = 3 Query: 111 NVTAKVHPLVIFNICDCYVR---RPDQAERVIGTLLGSVLPDG-TVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ-FQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPP 797 N + V PLV+ ++ D Y R +++RV+G LLG DG V + NS+ VP E + LD Y +M KVN +E ++GW+ +G + I+E + R PNP+ + VD + AY +V+ D ++ F P + EAE +G + L + +V L + + ++ L + DI Y+ ++G+ ++++ L + LP LS P Sbjct: 13 NRSVSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQ--NDGKNVRVSNSFAVPFEEDDKDPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLLVIVDVQPKETGVPTDAYFAVDEIKDDGTTTSKTFVHTPSIIEAEEAEEIGVEHLLRDIRDVAVGTLSTRITNQMRSLQGLHHRLRDIQAYLQKVLDGQLPVNHAILGNLQDVFNLLPNLSTP 251 The following BLAST results are available for this feature:
BLAST of FC878033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878033 ID=FC878033; Name=FC878033; organism=Citrus clementina; type=EST; length=905bpback to top |