FC878039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.029e-49 Identity = 91/154 (59.09%), Postives = 117/154 (75.97%), Query Frame = 1 Query: 433 EQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGL---SPGDMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 +QS WA+MPPELL D++ RIE S+ +WP+R++VV+CA VC++WR + KEI+R PE L+FP+SLKQPGPR + +QCYI R R TY LYLGL + D K LLAA++ R+ T TD++ISL DD SR SNTY+GKLRSNFLG KFT+YD Sbjct: 48 KQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYD 201
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 9.744e-48 Identity = 91/179 (50.84%), Postives = 128/179 (71.51%), Query Frame = 1 Query: 373 RRGRSYIAPEGXXXXXKI-----IVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG---DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 RRGRS+ A +V+ S WAN+PPELL D+I+R+EAS+ +WP+R++VVACA+VC++WR + +EI++ PE CG ++FPVSLKQPGPR+ IQC+I+R++ T TY LYL LS + K LL+A++ +AT T++ I + D+ SR+SN Y+GKLRSN LG KF IYD Sbjct: 30 RRGRSHSAVHELRDGHAAAAAADVVQSSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKFVIYD 208
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.662e-47 Identity = 83/157 (52.87%), Postives = 124/157 (78.98%), Query Frame = 1 Query: 424 IIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG---DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 I+++ ++WAN+P LL D++++++ S+++WPAR+ VVACA VCK+WR + K+I+++PE G L+FPVSLKQPGPRD IQCYI+R++ TY LYL LSP + K LL+A++ R+AT T+++IS+ D+ SR+S+TY+GKL+SNFLG KF +YD Sbjct: 48 IVIKNTRWANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNFLGTKFIVYD 204
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.077e-46 Identity = 89/174 (51.15%), Postives = 126/174 (72.41%), Query Frame = 1 Query: 373 RRGRSYIAPEGXXXXXKIIVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG---DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 RRG+S+ A +I + S WA++PPELL DII+R+E S+ +WP+R+ VVACA VC++WR + KEI++ PE CG ++FP+SL+QPGPRD +QC+IRR++ T TY LYL L D K LL+A++ AT T+++IS+ ++ SR++NT +GKLRSNFLG KF IYD Sbjct: 30 RRGKSHGAVHELHDPVPVI-QSSCWASLPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGPRDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTNTNIGKLRSNFLGTKFVIYD 202
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.556e-45 Identity = 85/156 (54.49%), Postives = 118/156 (75.64%), Query Frame = 1 Query: 427 IVEQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLS---PGDMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 I+ +S+WA++PPELL ++I+R+EA +++WP+RR+VV A+VC++WR + KE + +PE CG L+FPVS+KQPGPRD IQCYI+R R TY LYL LS + K +LAA++ RK T T++ IS+V + SR+S T +GKLRSNFLG KF IYD Sbjct: 53 IIPESRWASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMVSGNISRSSRTNIGKLRSNFLGTKFIIYD 208
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.533e-43 Identity = 82/150 (54.67%), Postives = 111/150 (74.00%), Query Frame = 1 Query: 445 WANMPPELLHDIIQRIEASQTS-WPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG--DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 W+ +P ELL +I+ R+E WP+RR+VVACA VC+SWR +TKEI+ PE L+FP+SLKQ GPRD+ +QC+I+R R T +Y LYLGL+ D K LLAA K+++AT TD++ISL DD S+ SN Y+G++RSNFLG KFT++D Sbjct: 33 WSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFLGTKFTVFD 182
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP9_ORYSJ (Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.363e-41 Identity = 79/153 (51.63%), Postives = 105/153 (68.63%), Query Frame = 1 Query: 433 EQSQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG--DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 E+ +W+ + PELL +I++R++A WP RRDVVACA VC+ WR ++R P +CG ++FP SLKQPGPRDAP+ C+IRR + T+ LYL L+ D K LLAAR+ R T+++IS DD SN+YVGKLRS+FLG KF IYD Sbjct: 48 EEERWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSNSYVGKLRSDFLGTKFIIYD 200
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.764e-41 Identity = 82/151 (54.30%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 442 QWANMPPELLHDIIQRIEASQTS-WPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGL--SPGDMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 +W+ +P ELL +I+ R+EA+ WP+RR VVACA VC+ WR + E + PE L+FP+SLKQPGPRD+ +QC+I+R R T +Y LYLGL S D K LLAA K++ T TD++ISL DD SR S YVGK+RSNFLG KFT++D Sbjct: 38 RWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKFTVFD 188
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP1_ORYSJ (Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.176e-39 Identity = 73/154 (47.40%), Postives = 108/154 (70.13%), Query Frame = 1 Query: 433 EQSQWANMPPELLHDIIQRIEASQTS-WPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG--DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 ++ +WA + PEL+ ++++R+EAS WPAR+DVV+CA VC+ WR ++R P + G ++FP SLKQPGPR+ P+QC+I+R + T+ LYLGL+ D K L+AAR+ R+ T++++SL DD S+ SN Y+GKLRS+F G F IYD Sbjct: 30 QEERWARLLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWRDAAVAVVRPPAESGKITFPSSLKQPGPREFPMQCFIKRNKKNSTFYLYLGLTNATVDKGKFLMAARRFRRGPHTEYIVSLDADDLSQGSNAYMGKLRSDFWGTNFKIYD 183
BLAST of FC878039 vs. ExPASy Swiss-Prot
Match: TLP7_ARATH (Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.842e-39 Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 439 SQWANMPPELLHDIIQRIEASQTSWPARRDVVACASVCKSWRAVTKEIIRTPEQCGLLSFPVSLKQPGPRDAPIQCYIRRERPTGTYRLYLGLSPG--DMSKLLLAARKIRKATSTDFLISLVGDDFSRNSNTYVGKLRSNFLGNKFTIYD 885 S W+ M PELL +II+R+E ++ WP RRDVV CA V K WR +T + R+ G ++FP LK PGPRD QC I+R + T T+ LYL L+P D K LLAAR+ R T+++ISL DDFS+ SN YVGKLRS+FLG FT+YD Sbjct: 42 SSWSAMLPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGPRDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSNAYVGKLRSDFLGTNFTVYD 192 The following BLAST results are available for this feature:
BLAST of FC878039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878039 ID=FC878039; Name=FC878039; organism=Citrus clementina; type=EST; length=887bpback to top |