FC878041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878041 vs. ExPASy Swiss-Prot
Match: EED_CHICK (Polycomb protein EED OS=Gallus gallus GN=EED PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.132e-51 Identity = 113/260 (43.46%), Postives = 162/260 (62.31%), Query Frame = 3 Query: 120 KREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN-VFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP 863 K ++ N L+E +PL+ V FN+ VFATVG NRVT+Y+C G I LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SCGMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC RWLGD ILSKS +N IV W+P Sbjct: 84 KYSFKCVNSLKEDHGQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSKRMINAIKESYEYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKP 338
BLAST of FC878041 vs. ExPASy Swiss-Prot
Match: ESC_DROVI (Polycomb protein esc OS=Drosophila virilis GN=esc PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.051e-50 Identity = 102/223 (45.74%), Postives = 142/223 (63.68%), Query Frame = 3 Query: 213 VFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPS--KFPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP 863 VFAT G NR TVY+C G + L Y D D +E FYT +W+ ++ P L A G G+IRVID+ + +++GHG +INE++ P K L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF+ RI S GMD+++K+W + +EF +E S T++ S FPT FP F +H NYVDC +W G+F+LSKS +N IV W+P Sbjct: 92 VFATAGSNRCTVYECPRKGGLTLLHCYADPDPDEVFYTCAWSYDLKTSAPLLAAAGYRGVIRVIDIEQNEAVDNYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFNMRG-DRIVSSGMDHSLKLWCLNTQEFQHKIELSQTFSQEKSTLPFPTITKHFPDFSTRDIHRNYVDCVQWFGNFVLSKSCENAIVCWKP 313
BLAST of FC878041 vs. ExPASy Swiss-Prot
Match: ESC_MUSDO (Polycomb protein esc OS=Musca domestica GN=esc PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.498e-50 Identity = 108/262 (41.22%), Postives = 158/262 (60.31%), Query Frame = 3 Query: 102 SLTPSKKREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN-VFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--FPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP 863 S + +K+ Y+ L+E + ++ V FN + + + VFAT G NR +Y+C G + + Y D D +E FYT SW+ ++ P L G G+IRVID+ + ++VGHG +INE++ P + +L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF RI S GMD+++K+W + EF +E S T+ S+ FPT FP F +H NYVDC +W GDF+LSKS +N IV W+P Sbjct: 54 SKSKAKRPAYKYDCHLKEDHGQAIFGVSFNHLLGKDQSMVFATAGSNRCNIYECPRKGGLKLIMCYADPDPDEVFYTCSWSYDLKTSAPLLATAGYRGVIRVIDIHRNESVGNYVGHGQAINELKFHPRQANLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFDLRG-ERIMSSGMDHSLKLWRIDTPEFKDKIEMSRTFNPNKSQLPFPTIMQHFPEFSTRDIHRNYVDCVQWFGDFVLSKSCENSIVCWKP 314
BLAST of FC878041 vs. ExPASy Swiss-Prot
Match: ESC_DROME (Polycomb protein esc OS=Drosophila melanogaster GN=esc PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.498e-50 Identity = 108/259 (41.70%), Postives = 154/259 (59.46%), Query Frame = 3 Query: 111 PSKKREYRVTNKLQEGKRP-LYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK--EFWTYVEKSFTWTDLPS--KFPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP 863 P + Y+ ++E ++ V FN + VFAT G NRVTVY+C G + L Y D D +E FYT +W+ ++ P L A G G+IRVIDV + +++GHG +INE++ P K L++S SKD ++RLWN+Q+ +CI I G GHR+EVLS+DF+ RI S GMD+++K+W + EF +E S T++ S FPT FP F +H NYVDC +W G+F+LSKS +N IV W+P Sbjct: 56 PKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQGGMQLLHCYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRG-DRIVSSGMDHSLKLWCLNTPEFHHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFGNFVLSKSCENAIVCWKP 313
BLAST of FC878041 vs. ExPASy Swiss-Prot
Match: MES6_CAEEL (Polycomb protein mes-6 OS=Caenorhabditis elegans GN=mes-6 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.342e-17 Identity = 88/310 (28.39%), Postives = 133/310 (42.90%), Query Frame = 3 Query: 120 KREYRVTNKLQEG-KRPLYAVVFNF---IDSRYFNVFATVGGNRVTVYQC--------LEGGVIAALQSYVDEDKEESFYTVSWACNV-----DGIPF-LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW--SMKEFWTYVE-----------------------------KSFTWTDLPSK------------FPTKYVQFPVFIAS-----VHSNYVDCNRWL--GDFILSKSVDNE 845 KR + +T KL E K+ +Y FN ID ATVGG+ + +Y L+ ++EES +TV+W + D PF +V GG G I VID + KL G IN+IRT P +L+V AS D+S+R+ +++ C+++ G H +LSVD+ + I SCG D+ + W S+K+ ++E KS ++P K P P++ S +HS+YVDC R+L ++ LSK NE Sbjct: 24 KRPFVLTAKLLEDQKKAIYGCAFNQYAGIDEE--QAVATVGGSFLHMYSVPIDINNIELQWSCNFPTDKSSKVEREESLFTVTWCYDTYEAENDRNPFKVVTGGTLGHIYVIDYVSRKLSNRLRSVGWEINDIRTCPANSNLIVCASSDQSIRIHHIRNEACLIVIGGLECHAGTILSVDWSTDGDF-ILSCGFDHQLMEWDLSVKQVKEHLERACKALHQDKINVLTQSQDIPYVSKGTMRKSAVSRNIPDKEEDQLLELHRELIPRPSCLLPIYTPSSVSTDMHSDYVDCIRFLIGTNYALSKGCGNE 330 The following BLAST results are available for this feature:
BLAST of FC878041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878041 ID=FC878041; Name=FC878041; organism=Citrus clementina; type=EST; length=877bpback to top |