FC878050

Overview
NameFC878050
Unique NameFC878050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length865
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:118..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.047e-48
Identity = 99/193 (51.30%), Postives = 127/193 (65.80%), Query Frame = 2
Query:  185 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 763
            I F  IIF+   + +         DRV +LPGQ   V F  YSGYVTV+++  RALFY+F EA  +P SKPLVLWLNGGPGCSS+  G   E GPF  +P G  L  N +SWNQ AN+L+L++PVGVGFSYS  SS      DK TA D+L FL +W  +F  +  R  +I+GESY GHYVPQL++ +I++N+
Sbjct:    9 ISFALIIFH---SLTVSSSVLSHSDRVTRLPGQP-RVGFQQYSGYVTVDDKKQRALFYYFAEAETNPSSKPLVLWLNGGPGCSSLGVGAFSENGPF--RPKGPILVKNQHSWNQEANMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQRWFLKFPHYLNRSLFITGESYAGHYVPQLAELMIQYNK 195          

HSP 2 Score: 23.0978 bits (48), Expect = 3.047e-48
Identity = 8/27 (29.63%), Postives = 16/27 (59.26%), Query Frame = 3
Query:  783 NLKGYMVGNALTDDYHDYLGLFQFWWS 863
            NL+G  +GN + +   D+    +++WS
Sbjct:  201 NLRGIAIGNPVLEFATDFNSRAEYFWS 227          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 1.756e-45
Identity = 89/172 (51.74%), Postives = 119/172 (69.19%), Query Frame = 2
Query:  263 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 763
            + KLPG        HYSGYVT+++E G+ L+Y+F+E+ ++P   P+VLWLNGGPGCSS+  G   E GPF+ +   K      L+LNPYSW++V+NI++LDSPVGVGFSYSN  SD  T GD +TA DS  FLLKW + F +F+   F+ISGESY G YVP L+  ++  N+
Sbjct:   35 ITKLPGFEGTFPSKHYSGYVTIDKEHGKNLWYYFIESEKNPSKDPVVLWLNGGPGCSSMD-GFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNNKSDYIT-GDIKTAVDSHAFLLKWFQMFPEFQSNPFFISGESYAGVYVPTLASEVVIGNK 204          

HSP 2 Score: 26.9498 bits (58), Expect = 1.756e-45
Identity = 11/27 (40.74%), Postives = 15/27 (55.56%), Query Frame = 3
Query:  753 GTTKQLGKAINLKGYMVGNALTDDYHD 833
            G    +  A+N KGY+VGN + D   D
Sbjct:  202 GNKNGVKPALNFKGYLVGNGVADPKFD 228          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 7.154e-44
Identity = 84/173 (48.55%), Postives = 118/173 (68.21%), Query Frame = 2
Query:  263 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT---LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIR-HNQAT 769
            +  LPG N      HY+GYV +++   + L+Y+FVE+  +    P+VLWLNGGPGCSS+  G   E GPF+ +P  K    L+LNPYSW++V+NI++LDSPVGVGFSYSN ++D TT+ D +TA D+  FLL+W + F +F+   F+ISGESY G YVP L+  +++ H   T
Sbjct:   30 ITNLPGFNGTFPSKHYAGYVAIDKHRNKNLWYYFVESERNASVDPVVLWLNGGPGCSSMD-GFVYEHGPFNFEPKKKNSHLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTD-DTKTASDTHTFLLEWFKMFPEFQSNPFFISGESYAGIYVPTLAAEVVKGHKNVT 200          

HSP 2 Score: 30.0314 bits (66), Expect = 7.154e-44
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  780 INLKGYMVGNALTDDYHDYLGLFQF 854
            IN KGY+VGN +TD+  D   L  F
Sbjct:  204 INFKGYLVGNGVTDEVFDGNALVPF 228          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.214e-43
Identity = 86/169 (50.89%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  263 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIR 754
            V  +PG +  +   HY+GYVTV E+ GR LFY+ VE+  DP   PLVLWLNGGPGCSS   G   E GPF+ +  G       L+LNPYSW++V+++++LDSP GVG SYS  +SD  T GD +TA DS  FLLKW + + +F    FYI+GESY G YVP LS  +++
Sbjct:   43 VKSVPGFDGALPSKHYAGYVTVEEQHGRNLFYYLVESERDPAKDPLVLWLNGGPGCSSFD-GFVYEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSPAGVGLSYSKNTSDYNT-GDLKTAADSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHEVVK 209          

HSP 2 Score: 27.7202 bits (60), Expect = 1.214e-43
Identity = 13/25 (52.00%), Postives = 14/25 (56.00%), Query Frame = 3
Query:  780 INLKGYMVGNALTDDYHDYLGLFQF 854
            IN KGYMVGN + D   D   L  F
Sbjct:  219 INFKGYMVGNGVCDTVFDGNALVPF 243          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.753e-43
Identity = 83/166 (50.00%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  263 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHN 760
            V +LPG + N+    Y+GY+  N   GR LFYWF E++ +P   PLV+W NGGPGCSS+  GEA E G F +  DG T+  NPYSWN+V+NIL+++ PVGVGFSYSN++ D     D + A D    L  +L RF QF GR+ Y++GESYGG YVP  +  I+  N
Sbjct:   16 VTQLPGLSGNIGVKSYTGYLLANATRGRYLFYWFFESMRNPSQDPLVMWTNGGPGCSSLG-GEASEHGLFLVNADGATITRNPYSWNRVSNILYIEQPVGVGFSYSNSTDDYQNLNDVQAASDMNNALRDFLTRFPQFIGRETYLAGESYGGVYVPTTAYNIVEGN 180          

HSP 2 Score: 22.3274 bits (46), Expect = 7.753e-43
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  780 INLKGYMVGNALTD 821
            +NL G +VGN +TD
Sbjct:  188 VNLVGILVGNGVTD 201          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 166.007 bits (419), Expect = 3.794e-42
Identity = 89/190 (46.84%), Postives = 117/190 (61.58%), Query Frame = 2
Query:  200 IIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIR 754
            ++  L  A S    A  +   V  LPG +  +   HY+GYVTV+E  GR LFY+ VE+  DP   P+VLWLNGGPGCSS   G   E GPF+ +  G       L+LNPY+W++V+ +++LDSP GVG SYS   SD  T GD +TA DS  FLLKW + + +F    FYI+GESY G YVP LS  +++
Sbjct:   16 LLLLLALALSGGGGAAPQGAEVTGLPGFDGALPSKHYAGYVTVDEGHGRNLFYYVVESERDPGKDPVVLWLNGGPGCSSFD-GFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVSDYET-GDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHEVVK 203          

HSP 2 Score: 27.7202 bits (60), Expect = 3.794e-42
Identity = 13/25 (52.00%), Postives = 14/25 (56.00%), Query Frame = 3
Query:  780 INLKGYMVGNALTDDYHDYLGLFQF 854
            IN KGYMVGN + D   D   L  F
Sbjct:  213 INFKGYMVGNGVCDTIFDGNALVPF 237          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.891e-40
Identity = 86/191 (45.03%), Postives = 124/191 (64.92%), Query Frame = 2
Query:  179 VQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 751
            +++L I  IF    +F    +A    D+V  LPG  F  +F HYSGY+    +  + L YW  E+   P   PLVLWLNGGPGCSS+  G  EE+GPFH+K  G ++Y N Y+WN+ AN+LFL+SP GVG+SYS T+ ++T + D+ +  + +  LL +L +F ++KGRDF+I+GESY G Y+P L+  I+
Sbjct:    1 MKLLSILFIFVSSYSFC---LAAPATDKVNDLPGLTFTPDFFHYSGYLRAWTD--KYLHYWLTESSRAPTQDPLVLWLNGGPGCSSLD-GLIEELGPFHVKDFGNSIYYNEYAWNKFANVLFLESPAGVGYSYS-TNFNLTVSDDEVSLHNYMA-LLDFLSKFPEYKGRDFWITGESYAGVYIPTLAVRIL 183          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.436e-37
Identity = 76/163 (46.63%), Postives = 108/163 (66.26%), Query Frame = 2
Query:  263 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 751
            +  LPG   + NF  YSGY  V  +    L YWFVE+  +P + P++LWL GGPGCS ++     E GP+++  DG TL  NPYSWN+ A+IL L++P GVG+SY+ T ++I T GD +TA ++ + L+ +   F Q+KG DFY++GESYGG YVP L + I+
Sbjct:   24 ITNLPGAPIS-NFKQYSGYYNVGTKKNHMLHYWFVESQSNPSTDPVLLWLTGGPGCSGLS-ALLTEWGPWNVNTDGATLRTNPYSWNKNASILTLEAPAGVGYSYA-TDNNIAT-GDDQTASENWEALVAFFNEFPQYKGNDFYVTGESYGGIYVPTLVQTIL 182          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.436e-37
Identity = 78/183 (42.62%), Postives = 110/183 (60.11%), Query Frame = 2
Query:  212 LGSAFSTDPVAQQ-KLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLE-RFSQFKGRDFYISGESYGGHYVPQLSKAIIR 754
            LG AF    V  Q + D +  LPG  F  NF  YSGYV  N      + Y   E+  +PD+ PL++W NGGPGCSS+  G  EE+GPF++  DG+TLY NPY+WN  AN+L+L+SP+GVG+SY  T+       D ++A  + + L  +      ++  R FY+SGESY G Y+P L+  I++
Sbjct:    6 LGVAFLVVTVLSQGEKDLIQNLPGLLFKANFKSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLG-GLFEELGPFYVNFDGQTLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQNYQALTNFFNVAQPKYTNRTFYLSGESYAGIYIPMLTDLIVQ 187          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.268e-36
Identity = 77/166 (46.39%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  257 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIR 754
            D +  LPG     +F  YSGY+       + L YWFVE+ +DP S P+VLWLNGGPGCSS+  G   E GPF I+PDG TL  NPYSWN +AN+L+L+SP GVGFSYS+  S  T   D   A+ + + L  +   F ++KG + +++GESY G Y+P L+  +++
Sbjct:   32 DEIRFLPGLAKQPSFRQYSGYL--KGSGSKRLHYWFVESQKDPKSSPVVLWLNGGPGCSSLD-GLLTEHGPFLIQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKSYAT--NDTEVAQSNFEALKDFFCLFPEYKGNELFLTGESYAGIYIPTLAVLVMQ 192          
The following BLAST results are available for this feature:
BLAST of FC878050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
SCP45_ARATH3.047e-4851.30Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP20_ARATH1.756e-4551.74Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
SCP21_ARATH7.154e-4448.55Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
CBP1_ORYSJ1.214e-4350.89Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
NF314_NAEFO7.753e-4350.00Virulence-related protein Nf314 OS=Naegleria fowle... [more]
CBP1_HORVU3.794e-4246.84Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
YSS2_CAEEL1.891e-4045.03Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
YUA6_CAEEL7.436e-3746.63Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
YPP3_CAEEL7.436e-3742.62Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
PPGB_BOVIN1.268e-3646.39Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA80CB06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA80CB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878050 ID=FC878050; Name=FC878050; organism=Citrus clementina; type=EST; length=865bp
AAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAAA
AATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGTC
TTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGGC
TTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGCA
TAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCAA
AAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACTT
TGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCTC
TCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCTT
GTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAGA
GGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTAT
ACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGAT
TCCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTTACTAA
AGTGGTTAGAACGGTTTTCACAATTTAAAGGAAGGGATTTCTACATCTCC
GGGGAGAGTTATGGAGGGCATTATGTTCCTCAGTTAAGCAAAGCAATCAT
AAGGCACAACCAAGCAACTGGGGAAAGCAATTAATCTGAAGGGCTACATG
GTGGGAAATGCTCTAACTGATGATTACCACGATTACTTGGGCCTTTTCCA
GTTTTGGTGGTCAGC
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