FC878050

Overview
NameFC878050
Unique NameFC878050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length865
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:118..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: KEX1_YEAST (Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae GN=KEX1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.470e-21
Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 2
Query:  329 NEESGRALFYWFVEAVEDPDS----KPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSD--ITTNGDKRTAEDSLKFLLKWLER----FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 763
            +E+    L Y+F +   +  +    +PL++WLNGGPGCSS+  G   E GPF +  DGK LYLN  SW    ++LF+D P G GFS      +  I  N      ED  K  + +LE     F +   R   +SGESY G Y+P  + AI+ HN+
Sbjct:   64 DEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMD-GALVESGPFRVNSDGK-LYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNK 216          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.470e-18
Identity = 59/184 (32.07%), Postives = 79/184 (42.93%), Query Frame = 2
Query:  326 VNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS-------NTSSD-----------------------------ITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQ 763
            VN+      F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  +  D  +   NPYSWN   N+L++D P  VGFSY        N  +D                              T N  +  A     F   W + F ++K  +  +S   ESYGG Y P  +      N+
Sbjct:   74 VNQNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCMVNNDSNSTTNNPYSWNNKVNMLYIDQPNQVGFSYDVPTNVTVNPINDEVTVADFSNGVPEQNNTLLVGTLGSQNPYATANNTQNAARSIWHFAQVWFQEFPEYKPNNDKVSIWTESYGGRYGPAFTSYFQEQNE 256          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SCPB_TRIRU (Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.532e-18
Identity = 54/175 (30.86%), Postives = 79/175 (45.14%), Query Frame = 2
Query:  353 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS------------------------------------YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRD--FYISGESYGGHYVPQLSKAIIRHNQ 763
            F+WF EA +DP++ PL +W+NGGPG SS+ +G   E GP  +  D  +  LNP+SWN   N+L++D PV VG S                                    Y++ + + T +G +  A     F   W + F  +  R+    I+ ESYGG Y P  +      NQ
Sbjct:   85 FFWFFEARKDPENAPLGIWMNGGPGSSSM-FGMMTENGPCFVNADSNSTRLNPHSWNNEVNMLYIDQPVQVGLSYDTLANFTRNLVTDEITKLKPGEPIPEQNATFLVGTYASRNMNTTAHGTRHAAMALWHFAQVWFQEFPGYHPRNNKISIATESYGGRYGPAFTAFFEEQNQ 258          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SCP54_ARATH (Putative serine carboxypeptidase-like 54 OS=Arabidopsis thaliana GN=SCPL54 PE=5 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.919e-18
Identity = 55/193 (28.50%), Postives = 93/193 (48.19%), Query Frame = 2
Query:  185 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 763
            +L +CI   L S F  DP  +                +   ++GY ++       LF++F ++  +  S P+V+WL+GGPGCSS                     Y+   S+ +++N++++D P+  GFSY+N S+D+  + D   + D   FL  + +        DFYI+GESY GHY+P L+  +   N+
Sbjct:   11 LLIVCIFSQLSSTFG-DPSVK----------------DLGQHAGYFSLPRSKSARLFHFFFQS-RNNSSDPVVIWLSGGPGCSS-----------------SNQRYI---SYLKISNLIYVDQPIRTGFSYANDSTDLRHDEDS-VSNDLYDFLQAFFKEHPNLAKDDFYITGESYAGHYIPALASRVHNGNE 164          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.919e-18
Identity = 57/146 (39.04%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  317 YVTVNEESGRALFYWFVEAV---EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLS 739
            YVTV E++   +F+W   A    ++    PLV+WL GGPG SS  +G  EEIGP    +KP   T       W Q A++LF+D+PVG GFSY NT+     + D   A D +  L  + +   +F+   FYI  ESYGG     +S
Sbjct:   42 YVTVREDA--RMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTRLKPRNTT-------WLQWASLLFVDNPVGTGFSYVNTTDAYAKDLD-TVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGIS 177          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17
Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  317 YVTVNEESGRALFYWFVEAV---EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLS 739
            YVTV +++   +F+W   A    ++    PLV+WL GGPG SS  +G  EEIGP    +KP   T       W Q A++LF+D+PVG GFSY NT+     + D   A D +  L  + +   +F+   FYI  ESYGG     +S
Sbjct:   42 YVTVRKDAH--MFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTQLKPRNTT-------WLQWASLLFVDNPVGTGFSYVNTTDAYAKDLD-TVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGIS 177          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SXA2_SCHPO (Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe GN=sxa2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17
Identity = 55/166 (33.13%), Postives = 83/166 (50.00%), Query Frame = 2
Query:  257 DRVGKLPGQNFNVNFAH-YSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 751
            DR+  LP   F  +    YSGY+  N  S ++LFY +  AV D  S+  ++WL GGPGC+    G   E GP  I     +  LNP SW   AN+L+LD P G G+S    +   T    +  + D +  L  + ++F     +  Y+ GESYG  +    ++A++
Sbjct:   59 DRIKSLP--EFKGSLPELYSGYLEAN--SDKSLFYTYAPAVVD--SETFIVWLQGGPGCAG-TLGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYSQGQAAYTTTI---EEASSDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEALL 214          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SPCA_TRIEQ (Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.116e-16
Identity = 57/175 (32.57%), Postives = 74/175 (42.29%), Query Frame = 2
Query:  353 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQ 763
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  I  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   T N     A     F   W + F + K  +  IS   ESYGG Y P  +      N+
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNE 256          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.116e-16
Identity = 57/175 (32.57%), Postives = 74/175 (42.29%), Query Frame = 2
Query:  353 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQ 763
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  I  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   T N     A     F   W + F + K  +  IS   ESYGG Y P  +      N+
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNE 256          
BLAST of FC878050 vs. ExPASy Swiss-Prot
Match: SPCA_TRIRU (Carboxypeptidase S1 homolog A OS=Trichophyton rubrum GN=SCPA PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.458e-16
Identity = 56/175 (32.00%), Postives = 74/175 (42.29%), Query Frame = 2
Query:  353 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQ 763
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  +  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   T N     A     F   W + F + K  +  IS   ESYGG Y P  +      N+
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWVNEDSKSTTNNSFSWNNKVNMLYIDQPNQVGFSYDVPTNITYSTINDTISVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNE 256          
The following BLAST results are available for this feature:
BLAST of FC878050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
KEX1_YEAST7.470e-2138.06Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae ... [more]
SPCA_NANOT3.470e-1832.07Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
SCPB_TRIRU4.532e-1830.86Carboxypeptidase S1 homolog B OS=Trichophyton rubr... [more]
SCP54_ARATH5.919e-1828.50Putative serine carboxypeptidase-like 54 OS=Arabid... [more]
RISC_RAT5.919e-1839.04Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]
RISC_MOUSE2.249e-1738.36Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]
SXA2_SCHPO2.938e-1733.13Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe... [more]
SPCA_TRIEQ1.116e-1632.57Carboxypeptidase S1 homolog A OS=Trichophyton equi... [more]
SCPA_TRITO1.116e-1632.57Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
SPCA_TRIRU1.458e-1632.00Carboxypeptidase S1 homolog A OS=Trichophyton rubr... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA80CB06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA80CB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878050 ID=FC878050; Name=FC878050; organism=Citrus clementina; type=EST; length=865bp
AAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAAA
AATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGTC
TTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGGC
TTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGCA
TAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCAA
AAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACTT
TGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCTC
TCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCTT
GTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAGA
GGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTAT
ACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGAT
TCCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTTACTAA
AGTGGTTAGAACGGTTTTCACAATTTAAAGGAAGGGATTTCTACATCTCC
GGGGAGAGTTATGGAGGGCATTATGTTCCTCAGTTAAGCAAAGCAATCAT
AAGGCACAACCAAGCAACTGGGGAAAGCAATTAATCTGAAGGGCTACATG
GTGGGAAATGCTCTAACTGATGATTACCACGATTACTTGGGCCTTTTCCA
GTTTTGGTGGTCAGC
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