FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gatA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28 Identity = 77/228 (33.77%), Postives = 115/228 (50.44%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 K+ F+ +E L QA + + GE I +L+G+ IA+KD + TT ++ L P T ++ L+ GAI+VGKTN+ E G+S N Y V NP+D +++ P+ALG D GGS+R PA+LCGVVG KPT+G + G++ ++ +G A TVED ++ AI G P S V +P+ S L +K+G Sbjct: 35 KVKAFLTLTKEQALAQAAQVDAKIAAGETIGLLEGIPIAIKDNLCTKGIQTTCASRILEGFVP-TYESTVTQELQEAGAIMVGKTNLDEFAMGSSTENSGYQVTGNPWDVTRVPGGSSGGSAAAVAAGEAPIALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKDSTSLDVDIPQYSQLLQPELPKDKPLKIG 261
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_COXBU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii GN=gatA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28 Identity = 87/273 (31.87%), Postives = 135/273 (49.45%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV--SLPKVSFPLLKSATSISAIKLGKYDAWF 844 H+ T+ + + I+ + + F+ ++ + NP + FI+ EE L QA + R KGE S L G+ IA KD T+ G+K L + P DA V +L GAIL+GKTNM E G+S N ++G +NP+D ++ L P A G D GGS+R PAALCG+ G KPT+GR+ G++ ++ G +A T EDA ++ A+ G ++ ++P + L TS+ +K+G +F Sbjct: 2 HQKTIAELKQDLRDKTISSVELTQHFLDRIK-TINPTLNS--FISITEEYALTQAKAADARLAKGEATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPY--DATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMAQTAEDAALLLNALAGHDAKDSTSINKNVPDYTATL---TTSLEGLKVGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_COXBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gatA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28 Identity = 87/273 (31.87%), Postives = 135/273 (49.45%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV--SLPKVSFPLLKSATSISAIKLGKYDAWF 844 H+ T+ + + I+ + + F+ ++ + NP + FI+ EE L QA + R KGE S L G+ IA KD T+ G+K L + P DA V +L GAIL+GKTNM E G+S N ++G +NP+D ++ L P A G D GGS+R PAALCG+ G KPT+GR+ G++ ++ G +A T EDA ++ A+ G ++ ++P + L TS+ +K+G +F Sbjct: 2 HQKTIAELKQDLRDKTISSVELTQHFLDRIK-TINPTLNS--FISITEEYALTQAKAADARLAKGEATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPY--DATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMAQTAEDAALLLNALAGHDAKDSTSINKNVPDYTATL---TTSLEGLKVGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_COXBN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gatA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28 Identity = 87/273 (31.87%), Postives = 135/273 (49.45%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV--SLPKVSFPLLKSATSISAIKLGKYDAWF 844 H+ T+ + + I+ + + F+ ++ + NP + FI+ EE L QA + R KGE S L G+ IA KD T+ G+K L + P DA V +L GAIL+GKTNM E G+S N ++G +NP+D ++ L P A G D GGS+R PAALCG+ G KPT+GR+ G++ ++ G +A T EDA ++ A+ G ++ ++P + L TS+ +K+G +F Sbjct: 2 HQKTIAELKQDLRDKTISSVELTQHFLDRIK-TINPTLNS--FISITEEYALTQAKAADARLAKGEATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPY--DATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMAQTAEDAALLLNALAGHDAKDSTSINKNVPDYTATL---TTSLEGLKVGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_COXB2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain CbuG_Q212) GN=gatA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28 Identity = 87/273 (31.87%), Postives = 135/273 (49.45%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV--SLPKVSFPLLKSATSISAIKLGKYDAWF 844 H+ T+ + + I+ + + F+ ++ + NP + FI+ EE L QA + R KGE S L G+ IA KD T+ G+K L + P DA V +L GAIL+GKTNM E G+S N ++G +NP+D ++ L P A G D GGS+R PAALCG+ G KPT+GR+ G++ ++ G +A T EDA ++ A+ G ++ ++P + L TS+ +K+G +F Sbjct: 2 HQKTIAELKQDLRDKTISSVELTQHFLDRIK-TINPTLNS--FISITEEYALTQAKAADARLAKGEATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPY--DATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMAQTAEDAALLLNALAGHDAKDSTSINKNVPDYTATL---TTSLEGLKVGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_COXB1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain CbuK_Q154) GN=gatA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28 Identity = 87/273 (31.87%), Postives = 135/273 (49.45%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV--SLPKVSFPLLKSATSISAIKLGKYDAWF 844 H+ T+ + + I+ + + F+ ++ + NP + FI+ EE L QA + R KGE S L G+ IA KD T+ G+K L + P DA V +L GAIL+GKTNM E G+S N ++G +NP+D ++ L P A G D GGS+R PAALCG+ G KPT+GR+ G++ ++ G +A T EDA ++ A+ G ++ ++P + L TS+ +K+G +F Sbjct: 2 HQKTIAELKQDLRDKTISSVELTQHFLDRIK-TINPTLNS--FISITEEYALTQAKAADARLAKGEATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPY--DATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMAQTAEDAALLLNALAGHDAKDSTSINKNVPDYTATL---TTSLEGLKVGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ALKMQ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkaliphilus metalliredigens (strain QYMF) GN=gatA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.089e-28 Identity = 75/261 (28.74%), Postives = 124/261 (47.51%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 T++D K Y T + V + +I ++E K++ FI EE L +A + +GE I +L G+ +A+KD + T+ ++ L P DA V +LR GAI++GKTNM E G+S N + V +NP+D +K+ P+ +G D GGS+R PAA CG VG KPT+G + G++ ++ +G TV+D + + G P ++ + + + +K+G Sbjct: 7 TIMDIRKGYVQKQFTVKDVVQGYIDRIKELDG---KINAFITLCEESALMEAAVLDEKLSRGEEIGLLGGIPVAIKDNMCTQGIKTSCASEMLADFIP-PYDATIVKKLRAAGAIIIGKTNMDEFAMGSSTENSAFKVTKNPWDLTKVPGGSSGGSAAALAAGFAPLTIGSDTGGSIRQPAAFCGTVGLKPTYGLVSRFGLIAFASSLDQIGPFTKTVKDCALSLQVMQGNDPLDSTSIQQEPMDDYVKDLDKGVKGLKVG 263
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THET2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gatA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27 Identity = 76/231 (32.90%), Postives = 124/231 (53.68%), Query Frame = 2 Query: 77 GDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 G+++P VA+ ++ V+E + F++ NE +L++A + +P L G+++AVKD I TT G++ L P +A V RL+ GA+++GKTN+ E G G+S + + +NP+DP ++ L P+ALG D GGSVR PAA CGV G KPT+GR+ G++ ++ +G +A +V D ++ A+ GP P ++ LP Sbjct: 13 GEVSPLEVAQAYLKRVQELDPG---LGAFLSLNER-LLEEA-------EAVDPGLPLAGLVVAVKDNIATRGLRTTAGSRLLENFVP-PYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMARSVRDLALLMDAVAGPDPLDATSLDLP 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MICAN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Microcystis aeruginosa (strain NIES-843) GN=gatA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27 Identity = 80/244 (32.79%), Postives = 127/244 (52.05%), Query Frame = 2 Query: 98 VAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF-PLLKSATSISAIKLG 826 +A F+ + ++ P +K F++ + L QA + + +GE + +L G+ IA+KD + PTT ++ L P ++ +LR GA++VGKTN+ E G+S N Y V NP+D S++ C VALG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G TVEDA ++ AI G P +++LP + LK TS+ +K+G Sbjct: 21 IATEFLARI-QALEPQVKS--FLHLTPDLALAQAQKVDEKIARGESLHLLAGIPIALKDNLCTKGIPTTCASRILENFVP-PYESTVTQKLRDLGAVIVGKTNLDEFAMGSSTENSGYHVTANPWDLSRVPGGSSGGSAAAVAAQECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFGRTVEDAAILLQAIAGYDPQDSTSLNLPIPDYSQFLK--TSLKGLKIG 258
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SALRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber (strain DSM 13855) GN=gatA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27 Identity = 76/230 (33.04%), Postives = 114/230 (49.57%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 T D +A +G+ + + F+ + N +++ F + +++ L A + ++G P L G+++AVKD I YP + G+K L DA + RLR GAI +GKTN E G+S H+G RNP+ P + LC ALG D GGSVR PAA CG VG KPT+GR+ SG++ ++ ++G L + EDA + I G Sbjct: 5 TFTDARRALDAGETSCEALVSSFLERIDARDN---EINAFTSVDQDGALNHARYLDSQRERGNP-RPLAGLVLAVKDNICIRGYPVSCGSKMLADFSSLY-DATVIDRLRDAGAIFIGKTNCDEFAMGSSNETSHFGPVRNPHAPEYVPGGSSGGSAAAVAAGLCHAALGSDTGGSVRQPAAFCGTVGLKPTYGRVSRSGLVAFASSLDVIGPLTRSAEDAATILNVIAG 229 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |