FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METM6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=gatA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27 Identity = 77/205 (37.56%), Postives = 109/205 (53.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLR-YKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK 772 FI+ N E +LK+A E Y K +P L G ++AVK I+ Y + +K L K T DA V +LRL GA++VG TNM E +G+SG ++G +NP +I LC +A+G D GGS+R PA+ CG+VGFKP++G + G+ L + +G L EDALV+ AI G S ++ PK Sbjct: 21 FIDVNSEKVLKEAEELEKNDYLKNKP---LYGKIVAVKSNINVKGYKISCASKTLEKYTG-TYDATVVKKLRLQGALIVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETPK 221
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_FRASC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Frankia sp. (strain CcI3) GN=gatA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27 Identity = 77/222 (34.68%), Postives = 111/222 (50.00%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 F++ + + L A R GE + L GV +A+KD PTT G++ L P DA V RLR +L+GK NM E G+S N +G RNP+D ++I P+ALG D GGS+R PAALCG+VG KPT+G + G++ + ++ G LA TV DA +++AAI G P +V P + I +++G Sbjct: 57 FLHVDADGALAAARSVDDRRAAGERLGPLAGVPLALKDVFTTRGMPTTCGSRILEGWHP-PYDATVVSRLRAADVVLLGKANMDEFAMGSSTENSAFGPTRNPWDVTRIPGGSSGGSAAAVAAFEAPLALGTDTGGSIRQPAALCGLVGVKPTYGGVSRYGLVAFSSSLDQAGPLARTVTDAALLHAAIAGHDPLDSTSVDAPVPAVVAAARQRDIRGMRVG 277
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THET8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gatA PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 3.022e-27 Identity = 76/231 (32.90%), Postives = 123/231 (53.25%), Query Frame = 2 Query: 77 GDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 G+++P VA+ ++ V+E + F++ NE +L++A + +P L G+++AVKD I TT G++ L P +A V RL+ GA+++GKTN+ E G G+S + + +NP+DP ++ L P+ALG D GGSVR PAA CGV G KPT+GR+ G++ ++ +G +A +V D ++ A GP P ++ LP Sbjct: 13 GEVSPLEVAQAYLKRVQELDPG---LGAFLSLNER-LLEEA-------EAVDPGLPLAGLVVAVKDNIATRGLRTTAGSRLLENFVP-PYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMARSVRDLALLMDAAAGPDPLDATSLDLP 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RHOBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodopirellula baltica GN=gatA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.022e-27 Identity = 79/255 (30.98%), Postives = 122/255 (47.84%), Query Frame = 2 Query: 62 KAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 K SG++T V + + A+R S ++ F + EE ++ A K G+ + L G+ +A+KD + S PTT +K L P DA V RL+ GAI+VGKTNM E G S GV NP+D +K P++LG D GGS+R PAA CG+ G KPT+GR+ G++ ++ G + +V+D + A+ G P +V+ F +A + +++G Sbjct: 10 KQLDSGEVTAVEVIAQSLAAIRASQPT---INAFTHVAEETAMQAAEAVDADRKAGKTLGPLAGLPVAIKDVLCTSDMPTTCSSKMLEGFVP-PYDATVVARLKSAGAIVVGKTNMDEFAMGASTETSAMGVTGNPWDTTKTPGGSSGGAAAAVAAGAVPLSLGTDTGGSIRQPAAFCGITGLKPTYGRVSRYGLVAFASSLDQAGPMGWSVDDVAIGLQAMAGYDPRDSTSVNAEVPDFTPAMAAEDVRGMRIG 260
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THEEB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermosynechococcus elongatus (strain BP-1) GN=gatA PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.947e-27 Identity = 72/204 (35.29%), Postives = 106/204 (51.96%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWL-HKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 F+ + L QA E R GE I +L G+ +A+KD + TT +K L H V P ++ +L+ GAI+VGKTN+ E G+S N +G NP++P +++ C ALG D GGS+R PAA CGVVG KPT+G + G++ ++ +G LA TV DA ++ AI G P ++ +P Sbjct: 39 FLTVTRDRALAQAAEVDKRLAAGEEIGLLTGIPLAIKDNLCTYGVRTTCASKMLEHFVPPY--ESTVTEKLQAAGAIMVGKTNLDEFAMGSSTENSAFGFTANPWNPERVSGGSSGGSAAAVAARECAAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPLAPTVTDAAILLGAIAGHDPKDATSLRVP 240
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_TRIEI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Trichodesmium erythraeum (strain IMS101) GN=gatA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27 Identity = 73/207 (35.27%), Postives = 109/207 (52.66%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 K+ FI E + QA + + GE I +L G+ IAVKD I PTT G+K L P ++ +L GAI++GKTN+ E G G+S N Y V NP+D +++ VALG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G L+ TV+D+ ++ AI G P ++++P Sbjct: 35 KLKSFICVTAEKAIAQARQVDAKIAAGEKIGLLTGIPIAVKDNICTRGIPTTCGSKILQNFIP-PYESTVTQKLVDAGAIILGKTNLDEFGMGSSTENSAYQVTTNPWDNTRVPGGSSGGSAAAVASAESVVALGSDTGGSIRQPASFCGVVGIKPTYGLVSRYGLVAYASSMDQIGPLSRTVKDSAILLQAIAGYDPKDSTSLNVP 240
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_AERPE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Aeropyrum pernix GN=gatA PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27 Identity = 78/232 (33.62%), Postives = 121/232 (52.16%), Query Frame = 2 Query: 41 WTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLR-YKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +TV ++Y +GD P R + A+R ++ FI+ E++L A E R +++GE L+GV++ VKD I S PTT G++ L P +A V RL + GAI++GKTN+ E G++G +G RNP+D S++ C ALG D GGSVR+PAA VG KPT+G + G++P ++ + +A + ED +++ I G Sbjct: 5 YTVKQLLESYRAGDTDPVEHVSRVLDALRRWERD---VNAFISLEAEEVLIDAAEEAARRWRRGEARR-LEGVVVGVKDNISTSFLPTTAGSRMLDGYIP-PFNATVVERLLMEGAIIIGKTNLDEFAMGSTGEFSAFGPTRNPWDLSRVPGGSSSGSGACLAYGACDAALGSDTGGSVRLPAAYTATVGLKPTYGLVSRYGLIPYANSLEQISPMARSSEDVMLLLEVIAG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN_PSESS (Indoleacetamide hydrolase OS=Pseudomonas syringae pv. savastanoi GN=iaaH PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.733e-27 Identity = 83/252 (32.94%), Postives = 124/252 (49.21%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSA 799 T+ +A + G+I + ER + + +++ FI E D + Q E+ KG P L G+ ++ KD I P T GT+ + DA V +LR GA++ GK NMHEL G + INPH+G NP P + P+++G D GGS+R+PAA CG+ GF+PT GR +G++P++ T VG+L T DA +Y ++G QQ SFPL ++A Sbjct: 6 TLESLCQALADGEIAAAELRERALDTEARLA----RLNCFIR--EGDAVSQFGEAD-HAMKGTP---LWGMPVSFKDNICVRGLPLTAGTRGMSGF-VSDQDAAIVSQLRALGAVVAGKNNMHELSFGVTSINPHWGTVGNPVAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAFCGITGFRPTTGRWSTAGIIPVSHTKDCVGLLTRTAGDAGFLYGLLSG---KQQ--------SFPLSRTA 235
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN_PSESY (Indoleacetamide hydrolase OS=Pseudomonas syringae pv. syringae GN=iaaH PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.793e-27 Identity = 61/161 (37.89%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 251 GVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 GV ++ KD I P T GT+ + DA V +L+ GA++ GK NMHEL G + INPH+G NP P + P+++G D GGS+R+PAA CG+ GF+PT GR+ +G++P++ T VG+L T DA VY ++G Sbjct: 65 GVPVSFKDNICVRGLPLTAGTRGMSGFI-ADQDAAIVSQLKALGAVVAGKNNMHELSFGVTSINPHWGAVGNPVAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAFCGITGFRPTTGRLSTAGIIPVSHTKDCVGLLTRTAGDAEFVYGLLSG 224
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESMR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=gatA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.148e-26 Identity = 72/205 (35.12%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 233 PISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF-PLLKSATSISAIKLGKYDAWF 844 P L GV + VKD I PTT G+K L P DA C+ ++R GA+++GK NM E G+S N Y V NP+D K+ C ALG D GGS+R PAA CG VG KPT+GR+ G++ ++ +G L T +DA V I GP P F L A ++ + +G D ++ Sbjct: 66 PDQRLWGVPVLVKDAICVKDAPTTCGSKILENFTPFY-DASCIEKMRAAGAVILGKANMDEFAMGSSTENSAYKVTANPWDLGKVPGGSSGGSAAAVAAGQCFAALGTDTGGSIRQPAAFCGTVGIKPTYGRVSRYGLVAYGSSLDQIGPLTRTADDAAAVLGVIAGPDPKDSTCAPRDVPDFEAALAGAADLAGLTIGLPDEYW 269 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |