FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SULSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26 Identity = 78/258 (30.23%), Postives = 125/258 (48.45%), Query Frame = 2 Query: 53 DYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 + S S ++ P + E FI R++ P K+ ++ ++ L++A + K E I L G+ IA+KD I TT +K L P DA + RL+ G ++ GKTN+ E G+S N + RNP+D ++ + P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G TVED ++ I+G P + S+P ++ L + +K+G Sbjct: 10 ELSDLVKSKEVKPSEIVEAFIE--RKNQVEP-KIKAYVTALDDLALEKAKKRDQELTKLENIPDLFGLPIAIKDNISTKDIKTTCSSKMLENFVPVY-DATVIERLKSQGYVITGKTNLDEFAMGSSTENSAFFPTRNPWDLERVPGGSSGGSAAVVASGMAPASLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPFGRTVEDVAMIMNVISGKDPKDSTSRSIPVPNY-LESLNKDVKGLKIG 262
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GEOKA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus kaustophilus GN=gatA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26 Identity = 73/207 (35.27%), Postives = 102/207 (49.28%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 K+ F+ NEE +A E + KGE + L G+ I +KD I TT +K L+ P DA + RL G I +GK NM E G+S N + + RNP+D ++ P ALG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED V AI G P + ++P Sbjct: 39 KVQAFLTLNEEQARAKAKELDNQLAKGEETNPLFGLPIGIKDNIVTKGLRTTCASKILYNFDPIY-DATVMERLNAAGTITIGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYVLQAIAGVDPMDSTSANIP 244
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NATTJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=gatA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.364e-26 Identity = 71/233 (30.47%), Postives = 113/233 (48.50%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 H T+++ + GD + + + E+ + + +I +E L Q+ E + KGE + L G+ +A+KD I T+ +K L P +A + +L GAI+VGKTNM E G+S N + V NP+D ++ P+ALG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G L+ VED + I+G Sbjct: 4 HELTLMEVKRGLEQGDFSSEELVTSVYDRIEETED---HIKAYITLTKEQALAQSKEIDSQRAKGEELGPLAGIPVAIKDNICTKDVTTSCASKILEDFVP-PYNATVISKLAEAGAIIVGKTNMDEFAMGSSTENSAFFVTSNPWDTERVPGGSSGGSAASVASAQVPLALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPLSKNVEDTALALDIISG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACST (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus stearothermophilus GN=gatA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.364e-26 Identity = 73/207 (35.27%), Postives = 102/207 (49.28%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 K+ F+ NEE +A E + KGE + L G+ I +KD I TT K L+ P DA + RL GAI +GK NM E G+S N + + RNP+D ++ P ALG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI G P + ++P Sbjct: 39 KVQAFLTLNEEQARAKAKELDDQLAKGEETNPLFGLPIGIKDNIVTKGLRTTCAIKILYNFDPIY-DATVMERLNAAGAITIGKLNMDEFAMGSSTENSGFQLTRNPWDLKRVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQAIAGVDPMDSTSANVP 244
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: Y1954_ARCFU (Putative amidase AF_1954 OS=Archaeoglobus fulgidus GN=AF_1954 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.699e-26 Identity = 82/249 (32.93%), Postives = 122/249 (49.00%), Query Frame = 2 Query: 50 LDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKS 796 +D + G+I P + E + + E NP K++ F+ NE+ I + KK + + L G+ IA+KD ++ TT +K+ P DA V RL+ GA+++GKTNM E G NP +G RNP+D S+ + PVA G DGGGS+R+PA+ CG+ G KP+FGR+P LP+ + G L VED ++ + G + SLP F LK+ Sbjct: 5 VDIVEKLKGGEIKPAELVEECLEKI-ERLNP--KINAFVTLNEKAIEEA--------KKADVSTPLAGLPIAIKDNVETRGIRTTYCSKFYENYVP-EEDAVLVERLKKAGAVIIGKTNMPEFGLIAYTDNPMFGPTRNPWDLSRTVGGSSGGSAAAVAAGILPVASGNDGGGSIRIPASFCGLYGLKPSFGRVPCYPSLPIFIGLHSEGFLTRYVEDTALMLDLVKG--WDIRDVKSLPDEEFSYLKA 239
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CYAA5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain ATCC 51142) GN=gatA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.699e-26 Identity = 69/207 (33.33%), Postives = 107/207 (51.69%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 K+ F+ + L+ A + + K E I +L G+ I +KD + + TT G+K L P ++ +L+ GA++VGKTN+ E G+S N Y V NP+D S++ C VALG D GGS+R PA+LCGVVG KPT+G + G++ ++ +G A V+DA ++ AI G P +++ P Sbjct: 35 KVKSFLQVTADHALETAKKVDEKIAKNEEIGLLAGIPIGIKDNMCTTGIKTTCGSKILANFVP-PYESTVTQKLKDAGAVMVGKTNLDEFAMGSSTENSGYQVTANPWDLSRVPGGSSGGSAAAVAASECVVALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARNVQDAAILLGAIAGYDPKDSTSINTP 240
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRCO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces coelicolor GN=gatA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.444e-26 Identity = 77/261 (29.50%), Postives = 124/261 (47.51%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 T + + +SG++T V E + + K+ F++ + E L QA + ++GE + L GV +A+KD PTT G+K L P DA RL+ +++GKTNM E G+S N YG NP+D +KI P+A+G D GGS+R PA++ G VG KPT+G + G++ + ++ G A TV DA +++ I G P ++ P + S+ +++G Sbjct: 8 TAAEIAAKIASGELTAVQVTEAHLARIEAVDE---KVHAFLHVDREGALAQARAVDEKRERGEKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIP-PYDATVTKRLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLTKIPGGSGGGSSAALAAFQAPLAIGTDTGGSIRQPASVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPMDSTSIDAPVPAVVEAARNGSVDGMRVG 264
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRAW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces avermitilis GN=gatA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.444e-26 Identity = 80/265 (30.19%), Postives = 130/265 (49.06%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSAT--SISAIKLG 826 R T + + +SG++T V E + + K+ F++ + E L QA + ++GE + L GV +A+KD PTT G+K L P DA +L+ +++GKTNM E G+S N YG NP+D S+I P+A+G D GGS+R PAA+ G VG KPT+G + G++ + ++ G A TV DA +++ I G P ++ P P++++A S+ +++G Sbjct: 10 RLTAAEIAAKVASGELTAVQVTEAHLARIDAVDE---KVHAFLHVDREGALAQARAVDEKRERGEKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIP-PYDATLTKKLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLSRIPGGSGGGSSAALASFEAPLAIGTDTGGSIRQPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLDSTSIDAPVP--PVVEAARNGSVEGMRVG 268
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SALAI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora arenicola (strain CNS-205) GN=gatA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.444e-26 Identity = 75/225 (33.33%), Postives = 114/225 (50.67%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP---KVSFPLLKSATSISAIKLG 826 F++ + E L A R GEP+ L GV +AVKD + PTT G++ L RP D+ V RLR G +++GKTNM E G+S +G NP+D S+I P+++G D GGS+R P A+ G VG KPT+G G++ + ++ G A TV DA +++ AI G PS ++ P V+ L ++ ++ ++LG Sbjct: 44 FLHVDTEGALDAARAVDARRAAGEPLGPLAGVPVAVKDVLTTKGIPTTAGSRILAGWRP-PYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPWDLSRIPGGSGGGSAAALAAYETPLSIGSDTGGSIRQPGAVTGTVGVKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHEAIGGHDPSDSTSIPAPVPDVVAAARLGASGDLAGVRLG 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_KINRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=gatA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.444e-26 Identity = 80/271 (29.52%), Postives = 126/271 (46.49%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMK-----MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSAT-SISAIKLG 826 RW S+A +G+++ V + + P + F++ + E L +A + G + L GV I VKD + PTT G++ L P DA V L G +++GKTNM E G++ + YGV RNP+DP++I P+ +G D GGS+R PAA+ G VG KPT+G + G++ L ++ G A TV D +++A I G P S ++P V AT ++ +++G Sbjct: 10 RWDAARLSEALRAGEVSAEEVTRAHLDRIDAVDGPTSGAGETGVHAFLHVDHEGALARARQIDADRAAGAELGPLAGVPIGVKDVLTTKGLPTTAGSRMLQGWVP-PYDATVVRELHAAGLVVLGKTNMDEFAMGSTTEHSAYGVTRNPWDPTRIPGGSGGGSAAALAAFEAPLTIGSDTGGSIRQPAAVTGTVGVKPTYGAVSRYGLIALASSLDQAGPCARTVLDTALLHAVIAGHDPYDSTSIPAAVPDVVGAARLGATGDLAGVRVG 279 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |