FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ACAM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acaryochloris marina (strain MBIC 11017) GN=gatA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.444e-26 Identity = 73/216 (33.80%), Postives = 107/216 (49.54%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLL 790 K+ F+ + L QA + + GE I +L G+ I +KD + TT G+K L P ++ +L GA++VGKTN+ E G+S N Y V NP+D S++ C V++G D GGS+R PAALCGVVG KPT+G + G++ ++ +G TVEDA ++ I G P S V +P S L+ Sbjct: 35 KLHSFLAITADQALAQAKQVDAQLAAGEEIGLLAGIPIGIKDNMCTKGIATTCGSKILQNFIP-PYESTVTQKLAAAGAVMVGKTNLDEFAMGSSTENSAYQVTGNPWDVSRVPGGSSGGSAAAVAADECVVSIGSDTGGSIRQPAALCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFGRTVEDAAILLQEIAGYDPQDSTSLKVEIPDYSKSLI 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROVI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=gatA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.722e-26 Identity = 79/261 (30.27%), Postives = 122/261 (46.74%), Query Frame = 2 Query: 80 DITPRMVA-----ERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 D+ PR++A E + E + ++ ++ +++A + ++G L G+ +A+KD I P T +K L R DA + RL AI +GKTNM E G+S N +G +NP+DPS++ LC VALG D GGSVR PA C VVG KPT+GRI G++ + +G+L+ + DA +V + G P + S + S S+ +K+G +FN Sbjct: 8 DLRPRLLAGEVSCEEVVRVYLERIERHGDDNIYLTVFRDEAIERAAALDRKLREGGEPGRLFGLPMAIKDNISMDGAPLTCASKMLEGYRSVY-DATVIRRLFDEDAIFLGKTNMDEFAMGSSNENSAFGPVQNPFDPSRVPGGSSGGSAAAVAAGLCMVALGSDTGGSVRQPAGFCDVVGLKPTYGRISRYGLVAFASSFDQIGVLSHSSMDAALVLGVMAGSDPHDATSSSHAVSDYCSEVSGVSVKGLKIGVPKEFFN 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROMT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL2A) GN=gatA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.722e-26 Identity = 82/268 (30.60%), Postives = 127/268 (47.39%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 T D + SG+++ + + + I + E P SF I N E L +A + G+ + L G+ IA+KD + TT +K L P ++ +L GAI++GKTNM E G+S +G NP++ +K+ LC +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG A V DA + I+G TV +P ++ L + SI +K+G D F+ Sbjct: 2 TFEDLRQKLKSGEVSSKELVQEKINRINELD--PTLNSFLIVNTEL-ALSKAEHIDKQIASGDHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVP-PYESTVTKKLLNAGAIMIGKTNMDEFAMGSSTETSAFGPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFANNVSDAAEILQVISGKDELDSTTVDIPVPNY-LETLSKSIKGMKIGLIDNCFD 264
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL1A) GN=gatA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.722e-26 Identity = 82/268 (30.60%), Postives = 127/268 (47.39%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 T D + SG+++ + + + I + E P SF I N E L +A + G+ + L G+ IA+KD + TT +K L P ++ +L GAI++GKTNM E G+S +G NP++ +K+ LC +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG A V DA + I+G TV +P ++ L + SI +K+G D F+ Sbjct: 2 TFEDLRQKLKSGEVSSKELVQEKINRINELD--PTLNSFLIVNTEL-ALSKAEHIDKQIASGDHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVP-PYESTVTKKLLNAGAIMIGKTNMDEFAMGSSTETSAFGPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFANNVSDAAEILQVISGKDELDSTTVDIPVPNY-LETLSKSIKGMKIGLIDNCFD 264
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: QRSL1_XENLA (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Xenopus laevis GN=qrsl1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.658e-25 Identity = 79/257 (30.74%), Postives = 124/257 (48.25%), Query Frame = 2 Query: 77 GDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK--------------------ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPL 787 G + P + ++ ++ ++E+S ++ +I E+ LKQA E+ R+ +G+P+ LDG+ IA+KD + TT ++ L K +A V +L GA+L+GKTN+ E G G+ + +G RNP+ S+ I C +A+G D GGS R PA+ CGVVG KPT+G + G++PL ++ + GIL V+DA V + G TV P F L Sbjct: 16 GQVKPTELCQKCLSLIKETSF----LNAYITITEDIALKQAAEADKRFAQGKPLGELDGIPIAIKDNFSTAGIETTCASRML-KGYVAPYNATVVQKLFDQGAVLMGKTNLDEFGMGSGSTDSIFGPVRNPWSYSRSYIEKRPISHHAAKDDSDWVIAGGSSGGSACAVSAGTCYLAIGSDTGGSTRNPASHCGVVGLKPTYGLVSRHGLIPLVNSMDIPGILTRCVDDAATVLGMLAGHDLYDSTTVQDPFQPFSL 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METMP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis GN=gatA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.658e-25 Identity = 77/208 (37.02%), Postives = 106/208 (50.96%), Query Frame = 2 Query: 161 FINNNEEDILKQATE----STLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK 772 FI+ N E +LK+A E TL+ K L G ++AVK I+ Y + +K L K T DA V +LR GA++VG TNM E G+SG YG +NP +I LC +A+G D GGS+R PA+ CG+VGFKP++G + G+ L + +G L EDALV+ AI G S ++ PK Sbjct: 21 FIDVNGEKVLKEAEELEKNDTLKNKP------LYGKIVAVKSNINVKGYKISCASKTLEKYVG-TYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETPK 221
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GEOTN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gatA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.658e-25 Identity = 72/209 (34.45%), Postives = 103/209 (49.28%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLP 769 K+ F+ NEE +A E + KGE + L G+ I +KD I TT +K L+ P DA + RL GAI +GK NM E G+S N + + RNP+D ++ P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + I G P+ S + +P Sbjct: 39 KVQAFLTLNEEQARAKAKELDDKLAKGEETNPLFGLPIGIKDNIVTKGLRTTCASKILYNFDPIY-DATVMERLNAAGAITIGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQVIAGVDPMDSTSANIDVP 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESAH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=gatA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.658e-25 Identity = 70/207 (33.82%), Postives = 109/207 (52.66%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 FI + L+ AT + R +GE +L G+ +A+KD + S TT +K L P T DA V L+ GA++VGKTN+ E G G+S N + + RNP++ + +C ALG D GGS+R PA+ CGVVG KP++GR+ G++ ++ +G + TV+DA ++ I+G P + ++ K F Sbjct: 43 FITVDAAGALEAATAADERIARGEDAPLL-GIPLALKDLLCTSGVRTTCASKILENFVP-TYDATAVTLLKQAGAVIVGKTNLDEFGMGSSTENSAFHLTRNPWNLDHVPGGSSGGSAAAVAARMCTAALGTDTGGSIRQPASHCGVVGLKPSYGRVSRFGMVAYASSLDQIGPITRTVKDAALMMNVISGHDPKDSTSAAIDKPDF 247
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SALTO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=gatA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.166e-25 Identity = 74/225 (32.89%), Postives = 113/225 (50.22%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP---KVSFPLLKSATSISAIKLG 826 F++ + E L A + R GEP+ L GV +AVKD + PTT G+K L RP D+ V RLR G +++GKTNM E G+S +G NP+D S+I P+++G D GGS+R P A+ G VG KPT+G G++ + ++ G A TV DA +++ I G P ++ P V+ L ++ ++ ++LG Sbjct: 44 FLHVDTEGALDAARDVDSRRAAGEPLGPLAGVPVAVKDVLTTKGVPTTAGSKILADWRP-PYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPWDLSRIPGGSGGGSSAALAAYETPLSIGSDTGGSIRQPGAVTGTVGVKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHEVIGGHDPLDSTSIPAPVPDVVAAARLGASGDLTGVRLG 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESVV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=gatA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.166e-25 Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = 2 Query: 251 GVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF-PLLKSATSISAIKLG 826 GV + VKD + + PTT G++ L P DA V RLR GAI++GK NM E G+S N Y RNP+D +++ C +LG D GGS+R PA+LCG VG KPT+GR+ G++ ++ +G + TVEDA +V I G P F L S ++ +++G Sbjct: 72 GVPVTVKDALTTAGTPTTAGSRILEDFVPFY-DAFAVQRLREAGAIILGKNNMDEFAMGSSTENSAYKPTRNPWDTARVPGGSSGGSAASVAAGQCFASLGTDTGGSIRQPASLCGCVGLKPTYGRVSRFGLIAYGSSLDQIGPMTRTVEDAAIVMGVIAGHDKRDSTCADRPVEDFAAALASRHDLAGVRIG 263 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |