FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 FI +EE LKQA + + K + +++ G+ +AVKD I TT +K L+ P DA V I++GKTNM E G S ++ +N +D +K+ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV++ Sbjct: 43 FITVSEEAALKQA--AAIDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 FI +EE LKQA + + K + +++ G+ +AVKD I TT +K L+ P DA V I++GKTNM E G S ++ +N +D +K+ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV++ Sbjct: 43 FITVSEEAALKQA--AAIDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 FI +EE LKQA + + K + +++ G+ +AVKD I TT +K L+ P DA V I++GKTNM E G S ++ +N +D +K+ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV++ Sbjct: 43 FITVSEEAALKQA--AAIDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRP8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M18 GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 FI +EE LKQA + + K + +++ G+ +AVKD I TT +K L+ P DA V I++GKTNM E G S ++ +N +D +K+ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV++ Sbjct: 43 FITVSEEAALKQA--AAIDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRP3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M3 GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 FI +EE LKQA + + K + +++ G+ +AVKD I TT +K L+ P DA V I++GKTNM E G S ++ +N +D +K+ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV++ Sbjct: 43 FITVSEEAALKQA--AAIDAKGIDSDNLMSGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACLS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 62/191 (32.46%), Postives = 90/191 (47.12%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ EE LK+A + + + P V DG+ I VKD I TT +K L P +A +L G I +GK NM E G SG N +N +D +K+ ++LG D GGS+R PAA G+VG KPT+GR+ G++ ++ +G L TVE+ + I+G Sbjct: 43 FLKVTEEKALKEA--AAIDARGINPDVVTDGISIGVKDNIVTEGIETTAASKILGGWIP-PYNATVANKLSQSGLITIGKLNMDEFAMGGSGENSSIKPTKNVWDQTKVPGGSSSGSAASVASGEVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTPTVEENAQLLNVISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 L GV IA+KD I + TT + L+ P ++ V +L+ A ++GKTNM E G+S ++G +NP++ +K+ ALG D GGS+R PA+ G+ G KPT+GR+ G++ ++ +G+++ V+D+ V I G Sbjct: 62 LAGVPIAIKDNIITNGLKTTAASHILYNFEPVY-ESTVVAKLKAAQATIIGKTNMDEFAMGSSTETSYFGDTKNPWNLNKVPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNGIFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVIAG 223
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus suis (strain 05ZYH33) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 59/191 (30.89%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ E+ L QA + L K + +V+ G+ +AVKD I TT +K L+ P DA V + I+VGKTNM E G S N + +N +D +K+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G + TV++ + I+G Sbjct: 43 FLTITEDAALAQA--AALDEKGIDADNVMAGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATSVAQAYAKDMIIVGKTNMDEFAMGGSNENSAFKPTKNAWDQTKVPGGSSGGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRS2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus suis (strain 98HAH33) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 59/191 (30.89%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ E+ L QA + L K + +V+ G+ +AVKD I TT +K L+ P DA V + I+VGKTNM E G S N + +N +D +K+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G + TV++ + I+G Sbjct: 43 FLTITEDAALAQA--AALDEKGIDADNVMAGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATSVAQAYAKDMIIVGKTNMDEFAMGGSNENSAFKPTKNAWDQTKVPGGSSGGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 FI +EE LKQA + + K + +++ G+ +AVKD I TT +K L+ P DA V I++GKTNM E G S ++ +N +D +K+ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV++ Sbjct: 43 FITVSEEAALKQA--AAIDAKGIDADNLMSGIPLAVKDNISTKGTLTTAASKMLYNYEPIF-DATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKE 220 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |