FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRU0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 57/191 (29.84%), Postives = 90/191 (47.12%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 FI EE L QA + + +P +V+ G+ AVKD I TT +K L+ P +A + + I++GKTNM E G S ++ +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G + TV++ + I G Sbjct: 43 FITLAEEKALSQA--EAIDARGIDPNNVMSGIPFAVKDNISTEGILTTAASKMLYNYEPIF-NATAIEKAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHSKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVIAG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSYCK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter cryohalolentis (strain K5) GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 59/205 (28.78%), Postives = 93/205 (45.37%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 K++ FI + E QA + +G+ +L GV +A KD TT G+K LH + P DA V + G I +GK NM E G+ + +YG NP++ + + PVA G D GGS+R PA+ CG+ G KPT+GR+ G++ ++ G + + D + + G P ++ Sbjct: 40 KINSFITHTSETARAQAKAADEMRVQGDKRPLL-GVPMAHKDIFCTQGVLTTCGSKMLHNFISPY--DATIVTNIDKAGMISLGKLNMDEFAMGSDNESSYYGAVHNPWNIAHVPGGSSGGSAAAVAAGFVPVATGSDTGGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGSMGRSAMDCAFLLQPMIGHDPRDATSI 241
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHRVO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chromobacterium violaceum GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 63/231 (27.27%), Postives = 109/231 (47.19%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 T+ S+ ++ ++ +A +++ + E+ NP +++ + + E L +A + R G+ L GV + KD + T+ G++ L V P + A V + G + +G+ NM E G+S N YG +NP+D + I L PVA D GGS+R PA+ CGV G KPT+G + G++ ++ G +A T ED ++ + G Sbjct: 5 TLKQLSQQLAAKQVSSVELASQYLDRI-EALNP--QLNAIVTVDREKTLAEARAADARLAAGDA-RALTGVPLVHKDLFCQQGWKTSCGSRMLDNFVSPYS--AHVVEQCAAAGMVTLGRANMDEFAMGSSNENSFYGAVKNPWDLNAIPGGSSGGSAAAVAARLAPVATATDTGGSIRQPASHCGVTGIKPTYGVVSRYGMVAYASSLDQGGPIAQTAEDCALMLNVMAG 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAUCR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Caulobacter crescentus GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 64/230 (27.83%), Postives = 103/230 (44.78%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXX-----LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 ++ +I + + A +S R GE L+G + VKD + TT +K L P T ++ +L GA+++GK N+ + G+S ++G NP+ T LC A D GGS+R PAA G VG KPT+GR GV+ ++ G +A TVEDA ++ +++G P ++ +P F S+ +K+G Sbjct: 39 LNAYILETPDKAIDMAAKSDARRALGEA-GPLEGAPLGVKDLFCTNGVRTTACSKILENFVP-TYESTVTSQLWRDGAVMLGKLNLDQFAMGSSNETSYFGPVTNPWRAQGSTKALTPGGSSGGSAAAVAADLCLGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIAKTVEDAALLLTSMSGHDPKDSTSLDIPVPDFTQF-VGKSVKGLKIG 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAUCN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 64/230 (27.83%), Postives = 103/230 (44.78%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXX-----LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 ++ +I + + A +S R GE L+G + VKD + TT +K L P T ++ +L GA+++GK N+ + G+S ++G NP+ T LC A D GGS+R PAA G VG KPT+GR GV+ ++ G +A TVEDA ++ +++G P ++ +P F S+ +K+G Sbjct: 39 LNAYILETPDKAIDMAAKSDARRALGEA-GPLEGAPLGVKDLFCTNGVRTTACSKILENFVP-TYESTVTSQLWRDGAVMLGKLNLDQFAMGSSNETSYFGPVTNPWRAQGSTKALTPGGSSGGSAAAVAADLCLGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIAKTVEDAALLLTSMSGHDPKDSTSLDIPVPDFTQF-VGKSVKGLKIG 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BREBN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = 2 Query: 65 AYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKG-EPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 A + +I+ + + I +++E ++ ++ +EE L A + R KG E + +L G+ +KD + TT +K+L P D +++ +++V K NM E G S N + A+NP++ + LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED+ V AI G Sbjct: 14 ALRAKEISVTDLVQASIASIKEHDG---EIKSVLHVDEEGALAHARQLDERLVKGNEELGLLYGLPAGLKDNLVTKDIRTTCASKFLANYDP-VHDGTVSKKVKDADSVIVAKLNMDEFAMGGSNENSGFFPAKNPWNTDYVPGGSSGGSAAAMAARHFYYTLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPVTKNVEDSAYVLQAIAG 233
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSYA2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=gatA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16 Identity = 59/205 (28.78%), Postives = 92/205 (44.88%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 K++ FI + E QA + +G+ +L GV +A KD TT G+K LH + P DA V + G I +GK NM E G+ + +YG NP++ + PVA G D GGS+R PA+ CG+ G KPT+GR+ G++ ++ G + + D + + G P ++ Sbjct: 40 KINSFITHTSETARTQAKAADEMRVQGDKRPLL-GVPMAHKDIFCTQGVLTTCGSKMLHNFISPY--DATIVTNIDKAGMISLGKLNMDEFAMGSDNESSYYGAVHNPWNIGHVPGGSSGGSAAAVAAGFVPVATGSDTGGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGSMGRSAMDCAYLLQPMIGHDPRDATSI 241
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_FRAP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=gatA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16 Identity = 59/221 (26.70%), Postives = 99/221 (44.80%), Query Frame = 2 Query: 74 SGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 SG++T + ++++ +++ ++ I E + LK+A + G+ S+L G+ I KD TT +K L V P D+ + G + +GK NM E G++ + +YG NP+D ++ PV+ G D GGSVR PA+ CG+ KPT+G G++ + GI ED ++ AI+G Sbjct: 13 SGEVTAVELTKQYLAKIKDQDK---SINSVITLCEAEALKEAENADAIISAGKQ-SLLTGIPILHKDLFCTKGIKTTAASKMLDNFVAPY--DSTVTKNCKDQGMVTLGKLNMDEFAMGSTNEHSYYGAVSNPWDLDRVPGGSSGGSAAAVAAGFAPVSTGSDTGGSVRQPASFCGLTAMKPTYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAISG 227
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_XANP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=gatA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 73/266 (27.44%), Postives = 113/266 (42.48%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY-----DPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 T+ + + G+ T + E ++ A+ E + P ++ ++ E L+ A ES R GE L+G+ + +KD TT K L P ++ L GA+L+GK N E G+S +G +P+ + + LC A G D GGS+R PAA G VG KPT+GR G++ ++ G A TV DA V+ ++ G P V+ P + A SI K+G Sbjct: 8 TLTQAREGLAQGEFTSVELTEAYLKAM-EQARP---LNAYVLETPEIALEMAKESDRRIASGET-GPLEGIPLGIKDMFATEGVRTTACAKILDNFIP-QYESTVTSHLWRDGAVLLGKLNNDEFAMGSSNETSAFGPVVSPWRRDGDETPLVPGGSSGGSAAAVAAFLCAGATGTDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPFARTVNDAAVLLKSMAGYDPKDSTCVNRPVPDYEEAVGA-SIKGKKIG 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MAGSA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=gatA PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 61/216 (28.24%), Postives = 97/216 (44.91%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY----DPSK--ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 ++ FI + L+ A S R + G S +DG+ I +KD TT + L +P ++ +L+ GAI +GK N+ E G+S ++G NP+ DP + + A G D GGS+R PAA CG+ G KPT+GR G++ ++ G +A TV D ++ A+ G P +V++ F Sbjct: 40 LNAFIVETPDLALEAAKASDARRQAGTAGS-MDGLPIGIKDLFCTEGVQTTAASHILEGFKP-PYESTVSGKLKAAGAISLGKLNLDEFAMGSSNQTSYFGAVENPWKKTSDPKAKLVPGGSSGGSAAAVAARMVLGATGTDTGGSIRQPAAFCGITGIKPTYGRCSRFGIVAFASSLDQAGPMARTVRDCAIMLGAMAGHDPKDSTSVNMAVPDF 253 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |