FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESVH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gatA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.166e-25 Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = 2 Query: 251 GVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF-PLLKSATSISAIKLG 826 GV + VKD + + PTT G++ L P DA V RLR GAI++GK NM E G+S N Y RNP+D +++ C +LG D GGS+R PA+LCG VG KPT+GR+ G++ ++ +G + TVEDA +V I G P F L S ++ +++G Sbjct: 72 GVPVTVKDALTTAGTPTTAGSRILEDFVPFY-DAFAVQRLREAGAIILGKNNMDEFAMGSSTENSAYKPTRNPWDTARVPGGSSGGSAASVAAGQCFASLGTDTGGSIRQPASLCGCVGLKPTYGRVSRYGLIAYGSSLDQIGPMTRTVEDAAIVMGVIAGHDKRDSTCADRPVEDFAAALASRHDLAGVRIG 263
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ANASK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter sp. (strain K) GN=gatA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.166e-25 Identity = 76/207 (36.71%), Postives = 100/207 (48.31%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 K+ F+ + + A + R +GE S LDGV +AVKD PTT G++ L P DA V RL GA++VGK NM E G+S N Y NP+D S+ +LG D GGS+R PAA CGVVG KPT+GR+ GV+ ++ VG LA V DA +V I G P + + P Sbjct: 44 KLGAFLAVSADRARAAARAADARAARGERRSELDGVPVAVKDIFVTKGVPTTAGSRILEGYLP-PYDATVVERLEAAGAVIVGKLNMDEFAMGSSNENSAYKPCHNPWDLSRTPGGSSGGSAASVAAGQVHASLGTDTGGSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPRDMTSSTRP 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METM5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=gatA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 76/205 (37.07%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYK-KGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK 772 FI+ N E +LK+A E K +P L G ++AVK I+ Y + +K L K T DA V +LR GA++VG TNM E G+SG YG +NP +I LC +A+G D GGS+R PA+ CG+VGFKP++G + G+ L + +G L EDALV+ AI G S ++ PK Sbjct: 21 FIDVNSEKVLKEAEELEKNDDLKNKP---LYGKIVAVKSNINVKGYKISCASKTLEKYVG-TYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPAALDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETPK 221
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CYAP4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gatA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 69/207 (33.33%), Postives = 103/207 (49.76%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 K+ F+ E L QA + G I +L G+ IA+KD + PTT G+K L P ++ RL GA++VGKTN+ E G+S N Y + NP+D ++ +ALG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G A VEDA ++ AI G P ++++P Sbjct: 35 KVHAFLTLTAEQALAQAERVDQQIATGTEIGLLAGIPIAIKDNLCTKGIPTTCGSKILQGFIP-PYESTVTSRLAAAGAVMVGKTNLDEFAMGSSTENSAYQLTANPWDLQRVPGGSSGGSAAAVAAGETLIALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFATNVEDAALLLGAIAGHDPQDSTSLNVP 240
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNP6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 76/234 (32.48%), Postives = 115/234 (49.15%), Query Frame = 2 Query: 128 ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF-PLLKSATSISAIKLG 826 E+ P +K F++ + + QA R GE IS+L G+ I +KD + PTT +K L P ++ RL GA+ VGKTN+ E G+S N Y NP+D +++ C VALG D GGS+R PAA CGVVG KPT+G + G++ ++ +G + +VED ++ AI G P ++ + + LK S++ IK+G Sbjct: 30 ETLEPQLKS--FLHVTADQAIAQAKAVDQRIAAGEEISLLAGIPIGIKDNLCTRGIPTTCASKILQGFVP-PYESTVTQRLAEAGAVAVGKTNLDEFAVGSSTENSAYQTTANPWDLTRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSRSVEDTAILLGAIAGHDPKDATSLKVEVPDYTQFLK--PSLAGIKVG 258
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNFM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 2 Query: 215 RYKKGEP---ISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 R+ +GE S L G+ +A+KD + TT G++ L P D + RLR GAI +GKTNM E G+S N YGV RNP+D ++ LC +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + VEDA ++ AI G Sbjct: 57 RFDRGERDLHASPLAGIPLAIKDVLCMQGTVTTCGSRILENFVP-PYDGTVIARLREAGAIFLGKTNMDEFAMGSSTENSAYGVTRNPWDRERVPGGSSGGSAAAVAADLCSGSLGTDTGGSIRQPASFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITKDVEDAAILLQAIAG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYMTH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Symbiobacterium thermophilum GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 74/227 (32.60%), Postives = 117/227 (51.54%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEP-ISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGP 736 ++ + +G+++ +AE ++ + + + FI + ++++A + R K G+ + L GV IAVKD I S TT ++ L K DA V RLR GA+++GK NM E G+SG + +GV RNP+D ++ P+ALG D GGS+R PAA G+VG KPT+G + GV+ ++ VG + VED ++ I GP Sbjct: 8 NRLFLAGELSAVEIAESALSRIAQVEPA---VGAFITVAADHVIERAKKLDARRKAGDTELGPLAGVPIAVKDNICTSGMETTCASRIL-KGYVSPFDATVVERLRAAGAMIIGKANMDEFAMGSSGESSAFGVTRNPWDLERVPGGSSSGSAAAVAAGEAPLALGTDTGGSIRQPAAFTGIVGLKPTYGYVSRYGVVAFASSLDQVGPMGRDVEDVARLFEVIAGP 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NOSP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 71/212 (33.49%), Postives = 107/212 (50.47%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFP 784 K+ F+ E L+QA + GE I +L G+ + +KD + PTT ++ L P ++ +L GA++VGKTN+ E G+S N Y V NP++ S++ C VALG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G A TVEDA ++ AI G P ++ KV+ P Sbjct: 35 KLHSFLCVTAERALEQAGAVDAKIAAGEEIGLLAGIPVGIKDNLCTKGIPTTCASRILENFVP-PYESTATQKLADAGAVMVGKTNLDEFAMGSSTENSAYQVTANPWNLSRVPGGSSGGSAAAVSSQECVVALGSDTGGSIRQPASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFANTVEDAAILLNAIAGHDPKDSTSL---KVAIP 242
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GLOVI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Gloeobacter violaceus GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 75/230 (32.61%), Postives = 112/230 (48.70%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 F+ E L A + +GE +L GV +AVKD + PTT +K L RP ++ RL GA+++GKTN+ E G+S N +G RNP+D ++ +LG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G TVEDA +V AI G PL S V++P L+ + + +K+G +F Sbjct: 39 FLRLTPERALAAAEAVDAKIARGEDPGLLAGVPVAVKDNLCMVGIPTTCASKILENYRP-PYESTVTRRLEEQGALIIGKTNLDEFAMGSSTENSAFGPTRNPWDLGRVPGGSSGGSAAAVAACEAVASLGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLIAFASSLDQIGPFTRTVEDAALVLQAIAGHDPLDSTSLAVNVPDYRQALI---SDLKGVKVGFVKEFF 264
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 81/252 (32.14%), Postives = 117/252 (46.43%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRES---SNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF-PLLKSATSISAIKLG 826 +T + A + A E S P K I N+E LKQA E + + L GV + +KD + + PTT G+K L P D+ V +L+ GAI+VGK NM E G++ N Y NP+D S++ C ALG D GGS+R+PA+ CG VG KPT+GR+ G++ ++ +G + TVEDA V I G + P F L+ +S + +G Sbjct: 17 MTKEVTATEAVKACLEQIAKSEPETKALLHICNDEA--LKQAEE--MDAAGPDASKPLWGVPVVIKDALATNGIPTTAGSKILEGFTPFY-DSTAVAKLKEAGAIIVGKANMDEFAMGSTTENSAYQTTTNPWDASRVPGGSSGGSGATVAAGQCYAALGTDTGGSIRLPASFCGCVGVKPTYGRVSRYGMIAYGSSLDQIGPMTRTVEDAARVLNVIGGHDQRDSTSAEQPMEDFVAALEERKDLSGLTIG 263 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |