FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CYAP8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 8801) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 68/205 (33.17%), Postives = 103/205 (50.24%), Query Frame = 2 Query: 230 EPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 E I +L G+ I +KD + PTT G++ L P ++ +L+ GA++VGKTN+ E G+S N Y V NP+D ++ C VALG D GGS+R PA+LCGVVG KPT+G + G++ ++ +G TVED +V AI G ++ LP + + S+ +K+G + F Sbjct: 62 EEIGLLAGIPIGIKDNMSTKGIPTTCGSRILENFIP-PYESTVTQKLQEIGAVMVGKTNLDEFAMGSSTENSGYQVTANPWDLERVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYGSSLDQIGPFGRTVEDVAIVLGAIAGYDAKDSTSLKLPIPDYTTFLN-PSLKGVKIGIIEETF 264
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ANAD2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 76/207 (36.71%), Postives = 100/207 (48.31%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 K+ F+ + + A + R +GE S LDGV +AVKD PTT G++ L P DA V RL GA++VGK NM E G+S N Y NP+D S+ +LG D GGS+R PAA CGVVG KPT+GR+ GV+ ++ VG LA V DA +V I G P + + P Sbjct: 44 KLGAFLAVSADRARAAARAADARAARGERRSELDGVPVAVKDLFVTKGVPTTAGSRILEGWLP-PYDATVVERLEAAGAVIVGKLNMDEFAMGSSNENSAYKPCHNPWDLSRTPGGSSGGSAASVAAGQVHASLGTDTGGSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPRDMTSSTRP 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ACIBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacteria bacterium (strain Ellin345) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 76/256 (29.69%), Postives = 124/256 (48.44%), Query Frame = 2 Query: 86 TPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 T +AE F + +++ ++ + + L QA + +G+ + L G+ +A+KD I TT G+K L + + P DA V +L GA+++GKTN E G+S N YG RNP D S++ +LG D GGS+R PA+ CGVVG PT+GR+ G++ ++ +G A V+DA ++ I G P+ + V++PK S + K + +K+G +F Sbjct: 21 TATAIAESFYKKIEAEDG---EINAYLTLSRDRALAQAAKIDAIADRGDDLPRLAGLPVAIKDVISTKGVRTTAGSKILEEFIAPY--DATVVQKLEAAGAVILGKTNCDEFAMGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGVVGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVKDAAIMLEVIAGRDPMDATSAEVAVPKYSDEIGK---PVRGMKIGVAKEYF 268
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNE7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus elongatus (strain PCC 7942) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 76/234 (32.48%), Postives = 115/234 (49.15%), Query Frame = 2 Query: 128 ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF-PLLKSATSISAIKLG 826 E+ P +K F++ + + QA R GE IS+L G+ I +KD + PTT +K L P ++ RL GA+ VGKTN+ E G+S N Y NP+D +++ C VALG D GGS+R PAA CGVVG KPT+G + G++ ++ +G + +VED ++ AI G P ++ + + LK S++ IK+G Sbjct: 30 ETLEPQLKS--FLHVTADQAIAQAKAVDQRIAAGEEISLLAGIPIGIKDNLCTRGIPTTCASKILQGFVP-PYESTVTQRLAEAGAVAVGKTNLDEFAMGSSTENSAYQTTANPWDLTRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSRSVEDTAILLGAIAGHDPKDATSLKVEVPDYTQFLK--PSLAGIKVG 258
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METM7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 73/204 (35.78%), Postives = 104/204 (50.98%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK 772 FI+ N E +LK+A E L L G ++AVK I+ Y + +K L T DA V +LR GA++VG TNM E +G+SG ++G +NP +I LC +A+G D GGS+R PA+ CG+VGFKP++G + G+ L + +G L EDALV+ AI G S ++ PK Sbjct: 21 FIDVNSEKVLKEAEE--LEKNDALKNKPLYGKIVAVKSNINVKGYKISCASKTLDNYIG-TYDATVVKKLRSQGALIVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETPK 221
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CYAP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 7424) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 74/224 (33.04%), Postives = 114/224 (50.89%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 F++ + L+ A + + E I +L+G+ + +KD + PTT G+K L P ++ +L+ GAI +GKTN+ E G+S + Y V NP+D S++ C VALG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G A TVEDA ++ AI G P S V +P + LK +S +K+G Sbjct: 39 FLHITADQALESAKKVDAKIAAKEEIGLLEGIPVGIKDNMCTQGIPTTCGSKILENFVP-PYESTVTQKLKDSGAITLGKTNLDEFAMGSSTESSGYQVTANPWDLSRVPGGSSGGSAAAVASEECVVALGSDTGGSIRQPASYCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDAAILLGAIAGYDPKDSTSLNVEIPDYT-QFLK--PKLSKLKIG 258
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ANADE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 74/191 (38.74%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 197 ATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 A + R +GE S LDGV +AVKD PTT G++ L P DA V RL GA++VGK NM E G+S N Y NP+D S+ +LG D GGS+R PAA CGVVG KPT+GR+ GV+ ++ VG LA V DA +V I G P + + P Sbjct: 60 AKAADARAARGERRSELDGVPVAVKDLFVTKGVPTTAGSRILEGYLP-PYDATVVERLEAAGAVIVGKLNMDEFAMGSSNENSAYKPCHNPWDLSRTPGGSSGGSAASVAAGQVHASLGTDTGGSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPRDMTSSTRP 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ACIC1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 71/203 (34.98%), Postives = 103/203 (50.74%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 F+ + + L A R GE + L GV +A+KD PTT G+K L P DA V ++R G +++GKTNM E G+S N +G RNP+D S+I P+A+G D GGS+R PAA+ G+VG KPT+G + G++ + ++ G A TV DA ++AAI G P ++ P Sbjct: 44 FLYVDADGALTAARAVDARLAAGERLGPLAGVPLALKDVFTTRGMPTTCGSKILEGWIP-PYDATVVQKIRDAGIVILGKTNMDEFAMGSSTENSAFGPTRNPWDLSRIPGGSSGGSAAAVAAFEAPLAIGTDTGGSIRQPAAVTGIVGTKPTYGGVSRYGLVAFSSSLDQAGPFARTVLDAAYLHAAIAGHDPRDATSIDAP 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BRAHW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=gatA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 74/243 (30.45%), Postives = 123/243 (50.62%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR-PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 T++ + + +I + + I + E + K+ ++ +E+ L+QA ++ R GE + +L GV +A+KD + + T +K L + P T A V RL GAI++G+TNM E G + +YGV RNP + + + ALG D GGS+R PA+ CG+VG KPT+GR+P G + + ++ VG L V+DA ++ I G P + T+++P Sbjct: 7 TIIQIREKLKNKEIDAPTLVDSIIKNIEEDNKRDDKIYAYLEIFKEEALEQAKKAQERINNGEDLPLL-GVPLAIKDNLCYKDHLMTASSKMLEGYKAPYT--APTVQRLIDNGAIIIGRTNMDEFAMGGTTETSNYGVTRNPKNRAHVPGGSSGGSAAAVAANFAFGALGSDTGGSIRQPASFCGIVGVKPTYGRVPRLGCIAMASSLDQVGPLTKDVKDAALMTKIIAGFDPKESTTLNIP 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: QRSL1_XENTR (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Xenopus tropicalis GN=qrsl1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.230e-25 Identity = 77/257 (29.96%), Postives = 124/257 (48.25%), Query Frame = 2 Query: 77 GDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK--------------------ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPL 787 G I P + ++ ++ ++E+S ++ +I E+ LKQA E+ R+ +G+P+ LDG+ IA+KD + TT ++ L K +A V +L GA+ +GKTN+ E G+ + +G +NP+ S+ IT C +A+G D GGS R PA+ CGVVG KPT+G + G++PL ++ + GI+ V+DA V + G P T+ P F L Sbjct: 16 GQIKPTELCQKCLSFIKETSF----LNAYITVTEDFALKQAAEADERFIQGKPLGDLDGIPIAIKDNFSTAGIETTCASRML-KGYIAPYNATVVQKLFDQGAVFMGKTNLDEFAMGSGSTDSIFGPVKNPWSYSRSYIDKTSLSHHAAKDDSDWVITGGSSGGSACAVSAGTCYLAIGSDTGGSTRNPASHCGVVGLKPTYGLVSRHGLIPLVNSMDVPGIVTRCVDDAATVLGVLAGHDPYDSTTIQDPFQPFSL 267 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |