FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PELLD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelodictyon luteolum (strain DSM 273) GN=gatA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.230e-25 Identity = 75/255 (29.41%), Postives = 118/255 (46.27%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 +T VA ++ +R + ++ F E + L++A L+ G L G+ +A+KD I P T +K L DA V+RL AI +GKTNM E G+S N +G NP+D ++ L VALG D GGSVR PA C +VG KPT+GRI G++ + +G+LA +DA +V + G + + P ++ + S+ +++G + +FN Sbjct: 18 VTCEAVARHYLDRIRSHEGDNIYITVF----ENEALQRARSLDLKLAGGGTPGRLFGMPMAIKDNISMKGAPLTCASKMLEGYTSVY-DATAVLRLEAEDAIFLGKTNMDEFAMGSSNENSAFGPVPNPFDNQRVPGGSSGGSAAAVAAGLAMVALGSDTGGSVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLALNCDDAALVLEVMAGVDGKDATSSAHPVPAYAAEMTDVSLKGLRIGVPEEFFN 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METBU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcoides burtonii (strain DSM 6242) GN=gatA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.230e-25 Identity = 74/216 (34.26%), Postives = 104/216 (48.15%), Query Frame = 2 Query: 197 ATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 A ++ KGE L GV IA+KD I TT +K L P DA + RL+ GA+++GKTNM E GTS + YGV NP+D ++ P++LG D GGSVR PAA CGVVG KPT+G + G++ ++ +G +A VED V I G + + S+ K + +K+G D +F Sbjct: 45 ALDTAKMVDKGEVAGPLAGVPIAIKDNISTKGLATTCSSKILEGYVP-PYDAHVIERLKEAGAVIIGKTNMDEFAMGTSTESSCYGVTLNPWDHERVPGGSSGGSAAVVAAGEAPISLGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGLISYANSLEQIGPMATCVEDIAAVMDVIGG--YDARDSTSIDKKIDHQAALIDDVKGLKIGVPDEYF 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLONN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium novyi (strain NT) GN=gatA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.075e-24 Identity = 75/223 (33.63%), Postives = 110/223 (49.33%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSI 808 K+ ++ ++E LK+A + ++GE + L GV + +KD I S T +K L + P DA + RL+ I++GK NM E G+S N + + RNP+D +I P++LG + GGSVR PAALCGVVG KPT+GRI GV+ T+ VG + V D ++ I+G S V++P L K T I Sbjct: 39 KIGAYLYLSKESALKEAKLLDEKIQRGEKLKGLWGVPVGIKDNISVSGMQNTCASKILENYISPY--DATVISRLKENNGIILGKLNMDEFAMGSSNENSAFKIVRNPWDLERIPGGSSGGSTAAVASREIPLSLGSETGGSVRQPAALCGVVGLKPTYGRISRYGVISFASTLDQVGTIGRDVTDCAILTEVISGFDKRDSTSARVAVPNYKESLKKDLTGI 259
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ANAVT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gatA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.075e-24 Identity = 72/228 (31.58%), Postives = 110/228 (48.25%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 K+ F++ + L+QA + GE I +L G+ I VKD + PTT ++ L P ++ +L GA++VGKTN+ E G+S N Y V NP+D S++ C VALG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G +VED ++ AI G P S V +P L + +++G Sbjct: 35 KLHSFLHITAQQALEQARAVDAKIAAGEEIGLLAGIPIGVKDNMCTKGIPTTCASRILENFVP-PYESTVTQKLLDAGAVVVGKTNLDEFAMGSSTENSAYQVTANPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFGKSVEDTAILLKAIAGYDPKDSTSLKVEIPDYVASLKPDLKARGKLRIG 261
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLTR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia trachomatis GN=gatA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 78/264 (29.55%), Postives = 123/264 (46.59%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKL 823 +R + L+ A + +++ + E F + ++ F++ +E L +A+ + KG+PI +L G+ I VKD I + TT +K L V P D+ V R+ + IL+GK NM E G++ + NP+D ++ CP+ALG D GGS+R PAA CGVVGFKP++G + G++ ++ +G L VED + A G P T K +F A S+ KL Sbjct: 2 YRKSALELRDAVVNRELSVTAITEYFYHRIESHDE---QIGAFLSLCKERALLRASRIDDKLAKGDPIGLLAGIPIGVKDNIHITGVKTTCASKMLENFVAPF--DSTVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFHPTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAAFCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDAFAGRDPKDSTTRDFFKGTF---SQALSLEVPKL 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLTB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=gatA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 78/264 (29.55%), Postives = 123/264 (46.59%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKL 823 +R + L+ A + +++ + E F + ++ F++ +E L +A+ + KG+PI +L G+ I VKD I + TT +K L V P D+ V R+ + IL+GK NM E G++ + NP+D ++ CP+ALG D GGS+R PAA CGVVGFKP++G + G++ ++ +G L VED + A G P T K +F A S+ KL Sbjct: 2 YRKSALELRDAVVNRELSVTAITEYFYHRIESHDE---QIGAFLSLCKERALLRASRIDDKLAKGDPIGLLAGIPIGVKDNIHITGVKTTCASKMLENFVAPF--DSTVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFHPTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAAFCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDAFAGRDPKDSTTRDFFKGTF---SQALSLEVPKL 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=gatA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 78/264 (29.55%), Postives = 123/264 (46.59%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKL 823 +R + L+ A + +++ + E F + ++ F++ +E L +A+ + KG+PI +L G+ I VKD I + TT +K L V P D+ V R+ + IL+GK NM E G++ + NP+D ++ CP+ALG D GGS+R PAA CGVVGFKP++G + G++ ++ +G L VED + A G P T K +F A S+ KL Sbjct: 2 YRKSALELRDAVVNRELSVTAITEYFYHRIESHDE---QIGAFLSLCKERALLRASRIDDKLAKGDPIGLLAGIPIGVKDNIHITGVKTTCASKMLENFVAPF--DSTVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFHPTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAAFCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDAFAGRDPKDSTTRDFFKGTF---SQALSLEVPKL 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLT2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=gatA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 78/264 (29.55%), Postives = 123/264 (46.59%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKL 823 +R + L+ A + +++ + E F + ++ F++ +E L +A+ + KG+PI +L G+ I VKD I + TT +K L V P D+ V R+ + IL+GK NM E G++ + NP+D ++ CP+ALG D GGS+R PAA CGVVGFKP++G + G++ ++ +G L VED + A G P T K +F A S+ KL Sbjct: 2 YRKSALELRDAVVNRELSVTAITEYFYHRIESHDE---QIGAFLSLCKERALLRASRIDDKLAKGDPIGLLAGIPIGVKDNIHITGVKTTCASKMLENFVAPF--DSTVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFHPTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAAFCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDAFAGRDPKDSTTRDFFKGTF---SQALSLEVPKL 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THISH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.833e-24 Identity = 76/250 (30.40%), Postives = 117/250 (46.80%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 H T+ + S A + G+ + + E F+ + ++ F+ E L QA + R +GE L GV +A KD TT G+K L + P DA V R + G ++GKTNM E G+S +G +NP+D +++ L P A G D GGS+R PAALCG+ G KPT+GR+ G++ ++ G +AAT ED ++ ++G P ++ P F Sbjct: 2 HEKTIAELSAALTKGECSSVELTEHFLKRIEALDGG---LNSFVTVTAEQALAQAKAADDRRARGEA-GPLTGVPMAQKDIFCTDGVRTTCGSKMLDNFIAPY--DATVVERFKAEGCPMLGKTNMDEFAMGSSNETSFHGPVKNPWDTARVPGGSSGGSAAAVAARLTPSATGTDTGGSIRQPAALCGITGLKPTYGRVSRWGMIAFASSLDQGGPMAATAEDCALLANVMSGFDPRDSTSIERPAEDF 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.833e-24 Identity = 77/263 (29.28%), Postives = 124/263 (47.15%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 ++ + + + G+++ + + I + E N + ++ N E A + GE + L GV A+KD + PTT +K L + P ++ RL G IL+GKTN+ E G+S +G +NP+D +++ LC ALG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG + V DA + I G P S V +PK S + + SIS +++G Sbjct: 2 SIAKWRQKLNKGEVSSLELINQQINRIEEVENT---LHSYLYLNHEKARASAIKIDEARAAGEELPPLAGVPFAIKDNLCTKGIPTTCSSKMLEEFIP-PYESTVTQRLWKAGGILLGKTNLDEFAMGSSTETSAFGPTKNPWDITRVPGGSSGGSAAAVASGLCTAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLIAFASSLDQVGPFSTNVSDAAEILQVIAGHDPRDSTCLDVPVPKYSDHI---SESISGLRIG 257 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |