FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PERMH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.833e-24 Identity = 74/255 (29.02%), Postives = 118/255 (46.27%), Query Frame = 2 Query: 80 DITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 ++ P V E F + + + +K+ ++ + E +++A + + I L G+ IA+KD I TT +K L P DA + RL+ ++ GKTN+ E G+S N + V RNP+D ++ L P ALG D GGS+R PAA CGV+G KPT+GR+ G++ ++ +G TVED ++ I+G P + F I IK+G + +F Sbjct: 19 EVKPSEVIESF---AQRTKDVEVKIKSYVTDLTEQAVERAKQLDEKISDLSEIPELFGIPIAIKDNISTEGIRTTCSSKILENYVP-PFDATVIKRLKDKEYVITGKTNLDEFAMGSSTENSAFFVTRNPWDLDRVPGGSSGGSAAAVSAGLAPAALGSDTGGSIRQPAAFCGVIGLKPTYGRVSRYGLVAFASSLDQIGTFTRTVEDTAILLNIISGKDPKDSTSADREVPDFTKFLD-KDIKGIKIGIPEEFF 268
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PARUW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Protochlamydia amoebophila (strain UWE25) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.833e-24 Identity = 71/264 (26.89%), Postives = 128/264 (48.48%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 ++++ ++ + GD++ + + ++ + + K+ F++ EE + QA + + +P+ L G+ IA+KD I +T G+K+L + A + L GA+++GKTNM E G+S N NP++ L P++LG D GGSVR+PA+ CGVVGFKPT+GR+ G++ ++ +G LA D ++ I P +++L + L + SI+ +K+G Sbjct: 2 YKFSAIEIRDQFIRGDVSASAITQHYLNRIAKYDQ---KIGAFLSVYEEQAMMQAKQLDQKRLANQPLGKLAGIPIAIKDNILVKGEISTCGSKFLTNFKS-PYQASVIEYLLAEGAVIIGKTNMDEFAMGSSTENSALQKTSNPWNLKCTPGGSSGGSAAAVAGRLSPLSLGSDTGGSVRLPASFCGVVGFKPTYGRVSRFGLVAYGSSLDQIGPLATNTADTALLMEVIGRHCPKDSTSIALGPEDY-LSQFKDSIAGMKIG 260
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METVS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.833e-24 Identity = 74/206 (35.92%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPIS--VLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK 772 FI+ N E +LK+A + +K E + L G +IAVK I+ Y + +K L T DA + +LR GA+++G TNM E +G+SG +YG +NP +I LC +ALG D GGS+R PA+ CGVVGFKPT+G + G+ L + +G L T ED+L + I G S ++ PK Sbjct: 21 FIDLNGERVLKEAKD----LEKNEKLKNKSLYGKIIAVKSNINVEGYKISCASKTLDNYTG-TYDATVIKKLRSEGALIIGMTNMDEFASGSSGETSYYGPTKNPKALDRIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPTYGVVSRQGLCDLAMSFDQIGPLTKTAEDSLNLTNVIKGLDLSNTTSLKTPK 221
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THEFY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermobifida fusca (strain YX) GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 74/254 (29.13%), Postives = 119/254 (46.85%), Query Frame = 2 Query: 65 AYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 A +SG+ + + ++ + E ++ F++ + L+QA R GE + L GV +A KD PTT +K L + DA RLR G +++GKTN+ E G+S N YG RNP+D ++ P+A G D GGS+R PAA+CG+VG KPT+G G++ ++ G +A V DA +++ A +G P +V+ P +S +++G Sbjct: 15 AIASGETSAVEATQAYLDRIAEVDG---QIHAFLHVAADKALEQARAVDARRAAGEKLGPLAGVPVAHKDVFTTKDMPTTAASKILEGWQS-PYDATVTERLRDAGLVILGKTNLDEFAMGSSTENSAYGPTRNPWDTDRVPGGSSGGSSAAVAAFEAPLATGTDTGGSIRQPAAVCGLVGAKPTYGTSSRYGLIAFASSLDTPGPIARNVLDAALLHEAFSGHDPRDSTSVNEPVPPVVEAARRADVSGMRIG 264
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GEOSW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus sp. (strain WCH70) GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 73/206 (35.44%), Postives = 102/206 (49.51%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRY-KKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLP 769 F+ NEE+ +A E + K+G VL G+ I +KD I TT +K L+ P DA + RL GAI +GK NM E G+S N + + RNP+D ++ P ALG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + I G P+ S V +P Sbjct: 43 FLTLNEENARAKAKELDDKLAKEGNDFGVLFGMPIGIKDNIVTKGLRTTCASKILYNFDPIY-DATVMERLNEAGAITIGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQVIAGLDPMDSTSANVEVP 247
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ANASP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena sp. (strain PCC 7120) GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 72/212 (33.96%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFP 784 K+ F++ + L+QA + GE I +L G+ I VKD + PTT ++ L P ++ +L GA++VGKTN+ E G+S N Y V NP+D S++ C VALG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G +VED ++ AI G Q + SL KV P Sbjct: 35 KLHSFLHITAQQALEQARAVDAKIAAGEEIGLLAGIPIGVKDNMCTKGIPTTCASRILENFVP-PYESTVTQKLLDAGAVVVGKTNLDEFAMGSSTENSAYQVTANPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFGKSVEDTAILLKAIAG--YDHQDSTSL-KVEIP 242
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNAS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophus aciditrophicus (strain SB) GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24 Identity = 69/191 (36.13%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +I E L++A ++ + + GE I+ L G+ +A+KD TT G+ L P DA V++LR GA+ GKTNM E G+S +YG RNP+D +I C ALG D GGS+R PAALCGVVG KPT+GR+ G++ ++ +G VED ++ I G Sbjct: 43 YITLMRESALEEAQKADEQIRTGE-INALTGIPVALKDIYCTRGVRTTCGSLILDNFIP-PYDATVVVKLREAGAVFTGKTNMDEFAMGSSTETSYYGFTRNPWDLERIPGGSSGGSAAAVAADECIAALGSDTGGSIRQPAALCGVVGMKPTYGRVSRFGLIAFASSLDQIGPFTKDVEDCAILLNVIAG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOTE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium tetani GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24 Identity = 65/195 (33.33%), Postives = 97/195 (49.74%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 K+ F+ E+ +K+A E + KGE + L G+ +++KD I T +K L + DA + +++ I++GK NM E G+S N Y RNP+D ++ P+ALG D GGSVR PAA CG+VG KPT+GR G + T+ VG+L+ VED ++ I G Sbjct: 39 KVGAFLYTGSEEAIKKAKELDNKISKGESLKALGGIPVSIKDNISVKGMQNTCASKMLEGYKS-PYDAHVIEKIKNEDGIILGKVNMDEFAMGSSTENSAYKKTRNPWDLDRVPGGSSGGSAAAVAAMETPLALGTDTGGSVRQPAAFCGLVGLKPTYGRTSRYGAIAFGSTLDQVGMLSKDVEDCALLTKNIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24 Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S+ ++ + + F+ + N K+ ++ +EE+ +K+A E ++ +K E + L G+ + +KD I+ T +K L DA +++ I++GK NM E G+S N + +A+NP+D ++ ++LG D GGSVR PA+ CGVVG KPT+GRI SGV+ T+ VG + VED ++ +AI G Sbjct: 16 SNKEVKAEEITKAFLDRINLVDN---KLGAYLYVSEEEAIKKAKEIDVKIEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTS-PYDAHVTEKIKQEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24 Identity = 68/200 (34.00%), Postives = 99/200 (49.50%), Query Frame = 2 Query: 137 NPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 N K++ F+ EE+ L A + KGE I +L G + +KD I T +K L + P DA ++ G +++GK NM E G+S N Y + RNP+D ++ P+ALG D GGSVR PA+ CG+VG KPT+GR+ SGV+ T+ VG L V+D ++ I+G Sbjct: 35 NIDAKVNAFLYIAEEEALNDAKALDEKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCASKILEGYISPY--DATVSESVKSQGGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYGRVSRSGVVAYGSTLDQVGTLGRDVKDCALLTQVISG 232 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |