FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP3_ARATH (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.865e-51 Identity = 95/206 (46.12%), Postives = 141/206 (68.45%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKP 826 + S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDA+D +DI LF+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN+++MIHQP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P EA EYG+ID VID + P+ + P Sbjct: 68 IDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTPP 273
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNY3 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpP2 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.865e-51 Identity = 98/184 (53.26%), Postives = 137/184 (74.46%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI-IPLVPV 808 D LL+ERI+FLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A +AIYD +Q +R DV T+ G++AS + +L GG KGKR A+P++RIMIHQP+GGA GQ +++EIQAREI++ KD ++ TG+ E++Q+D +RD +MS EA EYG+ID VI R ++ P PV Sbjct: 39 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPNLPDPTTPV 222
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.048e-51 Identity = 95/172 (55.23%), Postives = 131/172 (76.16%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D LLK+RIVFLG+ IDD+VA+ +I+QLL L+A+DP KD+ L++NSPGGS++A +AIYD +Q ++ DVST+ +G +AS A+++L G KGKR+A+PN RIMIHQP+GGA G DVEI RE++ KD RI+S TG+ E+++KD DRD +MS EA EYGI+D V+ Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.048e-51 Identity = 95/172 (55.23%), Postives = 131/172 (76.16%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D LLK+RIVFLG+ IDD+VA+ +I+QLL L+A+DP KD+ L++NSPGGS++A +AIYD +Q ++ DVST+ +G +AS A+++L G KGKR+A+PN RIMIHQP+GGA G DVEI RE++ KD RI+S TG+ E+++KD DRD +MS EA EYGI+D V+ Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.048e-51 Identity = 95/172 (55.23%), Postives = 131/172 (76.16%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D LLK+RIVFLG+ IDD+VA+ +I+QLL L+A+DP KD+ L++NSPGGS++A +AIYD +Q ++ DVST+ +G +AS A+++L G KGKR+A+PN RIMIHQP+GGA G DVEI RE++ KD RI+S TG+ E+++KD DRD +MS EA EYGI+D V+ Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.125e-50 Identity = 95/172 (55.23%), Postives = 129/172 (75.00%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D LLK+RI+FLG+ IDD VA+ +I+QLL L+A+DP KDI L++NSPGGS++A MAIYD +Q +R DVST+ +G++AS + +L G KGKR+A+PN IMIHQP GG GQ D+EI AR IM+ K++ +I++ TG+ E++QKD DRD +M+ EA EYGIID VI Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIIDEVI 191
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_THEEB (ATP-dependent Clp protease proteolytic subunit 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP1 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.469e-50 Identity = 105/225 (46.67%), Postives = 149/225 (66.22%), Query Frame = 2 Query: 188 QRQHDVPLSSAPQTPATAM----------------RGAEA-DAMGLLLKERIVFLGNN------IDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 793 Q ++D PLS+ ++PA + RG A D LL+ERI+FLG IDD VAD+I++QLL LDA+DP KDI L++NSPGGS++A MAIYD ++ +R DV T+ G++AS + +L GGT GKR A+PN RIMIHQP+GGA GQ +D+EIQAREI+++K ++S TG+ E+++ D +RD +MS EA YG+ID V+ R +++ Sbjct: 3 QSRYDHPLSAILRSPALNLPPTHANIVPMVVEQSGRGERAFDIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGAQGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAKAYGLIDQVVTRQTLL 227
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_GEOKA (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus kaustophilus GN=clpP PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.918e-50 Identity = 97/180 (53.89%), Postives = 134/180 (74.44%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 RG A D LLK+RIVFLG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++A +AIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ IMIHQP+GGA GQ ++EI A+ I+ +D RI+S TG+ E +++D DRD +M+ +A+EYGIID V+ R Sbjct: 13 RGERAYDIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYGIIDRVLTR 192
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_NATTJ (ATP-dependent Clp protease proteolytic subunit OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=clpP PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.505e-50 Identity = 91/174 (52.30%), Postives = 131/174 (75.29%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 D LLK+RI+F+G I+D +A+++I+Q+L L+++DP KDI L++NSPGG + A +AIYD +Q +R+DVST+ +GM+AS +++L G +GKRF +PN+RIM+HQPMGGA GQ DVEI AREIM K+ +I++ TG+ EQ+ KD DRD +MS EA +YG+ID V+ R Sbjct: 19 DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVIDDVLKR 192
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMP (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP3 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.505e-50 Identity = 96/199 (48.24%), Postives = 141/199 (70.85%), Query Frame = 2 Query: 191 RQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 784 R D S+ P + RG A D LL+ERI+FLG I+D V+D++++QLL L+A+DP KDI++++NSPGGS++A +AIYD +Q + DV T+ G++AS + +L GG KGKR A+PN+RIMIHQP+GGA GQ +++EIQA+EI+ K +++ T +S E++ +D +RD ++SP EAVEYG+ID VI D Sbjct: 16 RDIDKSRSAVPTVVEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQIYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEAVEYGLIDKVIKND 214 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |