FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_SALPK (ATP-dependent Clp protease proteolytic subunit OS=Salmonella paratyphi A (strain AKU_12601) GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.543e-47 Identity = 84/190 (44.21%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A ++IYD +Q ++ DVST+ +G +AS + +L G KGKRF +PN+R+MIHQP+GG GQ D+EI AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++ Sbjct: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_SALPA (ATP-dependent Clp protease proteolytic subunit OS=Salmonella paratyphi A GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.543e-47 Identity = 84/190 (44.21%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A ++IYD +Q ++ DVST+ +G +AS + +L G KGKRF +PN+R+MIHQP+GG GQ D+EI AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++ Sbjct: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_PELLD (ATP-dependent Clp protease proteolytic subunit OS=Pelodictyon luteolum (strain DSM 273) GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.543e-47 Identity = 98/203 (48.28%), Postives = 138/203 (67.98%), Query Frame = 2 Query: 212 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEK 817 S P T+ RG A D LL+ERI+FLG+ ID+ VA I++QL+ L+++DP +DI ++VNSPGGS+SA + IYD +Q +R DVSTV +GM+AS + +L G KGKR ++P++RIMIHQP GGA GQ D+ IQAREI + I++ TG+ +QV++D +RDR+M+ EA++YGIID V + P PEK Sbjct: 27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEILASHTGKDVQQVREDSERDRWMNAEEALDYGIIDQVFAKR------PAPEK 223
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_LACSS (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.543e-47 Identity = 88/178 (49.44%), Postives = 132/178 (74.16%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 RG A D LLK+RI+ L ++D +A+ II+QLL LDAQD KDI +++NSPGGS++A +AI D + +++DV T+A+GM+AS AS++L GTKGKRFA+PN+ ++IHQP+GGA GQ ++EI AREI+ + +I++ +G++FE++Q D DRD YM+ EA +YG+ID ++ Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEVNDQMANTIIAQLLFLDAQDSDKDISIYINSPGGSVTAGLAIMDTMNFIKSDVQTIAMGMAASMASVLLSAGTKGKRFALPNSTVLIHQPLGGAQGQQTEIEIAAREILKTRKRLNQILADNSGQTFEKLQADTDRDNYMTAQEAKDYGLIDDIM 189
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSM (ATP-dependent Clp protease proteolytic subunit OS=Geobacter sp. (strain M21) GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.543e-47 Identity = 88/177 (49.72%), Postives = 127/177 (71.75%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 790 D LLK+RI+FLG IDD VA+ +I+QLL L+A+DP KDI L++NSPGG ++A MAIYD ++ ++A VST+ +G +AS + +L GG KGKR+++ N+RIMIHQP+GG GQ D+ I A+EI+ KD +++ TG+S E+V D +RD +MS EA YGIID ++ R+ + Sbjct: 18 DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATDIHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIVTRNVV 194
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_GEOBB (ATP-dependent Clp protease proteolytic subunit OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.543e-47 Identity = 88/177 (49.72%), Postives = 127/177 (71.75%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 790 D LLK+RI+FLG IDD VA+ +I+QLL L+A+DP KDI L++NSPGG ++A MAIYD ++ ++A VST+ +G +AS + +L GG KGKR+++ N+RIMIHQP+GG GQ D+ I A+EI+ KD +++ TG+S E+V D +RD +MS EA YGIID ++ R+ + Sbjct: 18 DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIVTRNVV 194
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_ACTPJ (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.543e-47 Identity = 85/172 (49.42%), Postives = 127/172 (73.84%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D LLKERI+FL ++D +A+ I++Q+L L+A+DP KDI L++NSPGG ++A +AIYD + ++ DV+T+ G + S + +L GG KGKRFA+PN R+MIHQP+GGA GQ D++IQA+EI+ K+ TR ++ +G+ FE+V D +RD +MS +EA+EYG+ID V+ Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP2 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.543e-47 Identity = 85/172 (49.42%), Postives = 127/172 (73.84%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D LLKERI+FL ++D +A+ I++Q+L L+A+DP KDI L++NSPGG ++A +AIYD + ++ DV+T+ G + S + +L GG KGKRFA+PN R+MIHQP+GGA GQ D++IQA+EI+ K+ TR ++ +G+ FE+V D +RD +MS +EA+EYG+ID V+ Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_PELPD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter propionicus (strain DSM 2379) GN=clpP PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.852e-47 Identity = 92/188 (48.94%), Postives = 130/188 (69.15%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 P + RG A D LLKERI+FLG IDD VA+ II+QLL L+A+DP KDI L++NSPGG +++ MAIYD ++ ++A VST+ +G +AS +++L G KGKRF++ ++RIMIHQP+GG GQ D+ I A+EI+ K+ I++ TG+S E+++ D DRD +MS EA EYG+ID R Sbjct: 4 PMVVEQSGRGERAYDIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHLYINSPGGVVTSGMAIYDTMRYIKAPVSTICVGQAASMGAVLLAAGEKGKRFSLNHSRIMIHQPLGGFQGQATDISIHAKEILRMKEELNSILADLTGQSKERIEADTDRDYFMSATEAEEYGLIDATFTR 191
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_LEPIN (ATP-dependent Clp protease proteolytic subunit OS=Leptospira interrogans GN=clpP PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.852e-47 Identity = 96/193 (49.74%), Postives = 133/193 (68.91%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 784 +S P RG + D LLK+RI+FLGN I+D A+ I +QLL L+A++P +DI L++NSPGG +S+ +AIYD +Q ++ DV T+ LG ++S A+L+L GG GKR A+PN RIM+HQPMGGA+GQ D+EIQARE++ K+ I TG++ EQ+QKD +R+ YM+ EA YGIID VI D Sbjct: 1 MSVIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYLYLNSPGGYVSSGLAIYDTMQYIKPDVRTLCLGQASSMAALLLAGGAAGKRSALPNARIMMHQPMGGATGQASDIEIQAREVLKLKEILNSIYHKHTGKTVEQIQKDTERNFYMTADEAKNYGIIDTVIQID 193 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |