FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.889e-46 Identity = 86/176 (48.86%), Postives = 127/176 (72.16%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 787 D L +ERI+FLG +DD +A+ I++ +L LD++DP KDI L++NSPGGS++A MAIYD +Q +++DV T+ +G++AS S +L GTKGKR A+P++RIMIHQP GG GQ D+EI+AREI+ + + + TG+ E++++D+DRD +MS EA YG+ID VI+ S Sbjct: 22 DIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAKNYGLIDRVIEERS 197
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_DESHY (ATP-dependent Clp protease proteolytic subunit 2 OS=Desulfitobacterium hafniense (strain Y51) GN=clpP2 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.889e-46 Identity = 87/177 (49.15%), Postives = 129/177 (72.88%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPM---GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 D LLK+RI+FLG + D VA+ +++Q+L L+A+DP KDI L++NSPGGS+SA MAIYD +Q +RADV T+ +G++AS + +L G KGKR A+PN I+IHQP+ GG SGQ ++EI A+ ++ K+ RI++ TG++ E+++ D DRDRYM+ EA EYG+ID V+++ Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPGGSISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQPLIGGGGISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEEAKEYGLIDEVLEK 196
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_GEOLS (ATP-dependent Clp protease proteolytic subunit OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=clpP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.386e-46 Identity = 92/188 (48.94%), Postives = 130/188 (69.15%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 P + RG A D LLKERIVFLG I+D VAD +I+QLL L+A+DP KDI L++NSPGG ++A MAI+D + ++A VST+ +G +AS +++L G KGKRFA+P+ RIMIHQP GG+ GQ D+ IQA EI+ K R+++ +G+ E++++D +RD +MS EA YG+ID V+ R Sbjct: 4 PMVVEQSGRGERAYDIYSRLLKERIVFLGGEINDQVADLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIFDTMNYIKAPVSTICIGQAASMGAVLLTAGEKGKRFALPHARIMIHQPSGGSRGQATDIMIQAEEILRMKRELNRLLADLSGQPVERLEQDTERDFFMSAEEARNYGLIDAVMTR 191
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_FRATW (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=clpP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.386e-46 Identity = 86/179 (48.04%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-RDSII 793 D LLKERIVFL ++D A+ +I+QLL L+++DP KDI ++NSPGG ++A M +YD +Q ++ DVST+ +G++AS SL+L GG KGKR+++P+++IMIHQP+GG GQ D+EI A+ I+ KD ++++ TG+ E + KD DRD +M EA YG+ID VI+ R++II Sbjct: 22 DIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAII 200
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_FRATT (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. tularensis GN=clpP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.386e-46 Identity = 86/179 (48.04%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-RDSII 793 D LLKERIVFL ++D A+ +I+QLL L+++DP KDI ++NSPGG ++A M +YD +Q ++ DVST+ +G++AS SL+L GG KGKR+++P+++IMIHQP+GG GQ D+EI A+ I+ KD ++++ TG+ E + KD DRD +M EA YG+ID VI+ R++II Sbjct: 22 DIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAII 200
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_FRATO (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=clpP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.386e-46 Identity = 86/179 (48.04%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-RDSII 793 D LLKERIVFL ++D A+ +I+QLL L+++DP KDI ++NSPGG ++A M +YD +Q ++ DVST+ +G++AS SL+L GG KGKR+++P+++IMIHQP+GG GQ D+EI A+ I+ KD ++++ TG+ E + KD DRD +M EA YG+ID VI+ R++II Sbjct: 22 DIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAII 200
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_FRATN (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. novicida (strain U112) GN=clpP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.386e-46 Identity = 86/179 (48.04%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-RDSII 793 D LLKERIVFL ++D A+ +I+QLL L+++DP KDI ++NSPGG ++A M +YD +Q ++ DVST+ +G++AS SL+L GG KGKR+++P+++IMIHQP+GG GQ D+EI A+ I+ KD ++++ TG+ E + KD DRD +M EA YG+ID VI+ R++II Sbjct: 22 DIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAII 200
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_FRATM (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=clpP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.386e-46 Identity = 86/179 (48.04%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-RDSII 793 D LLKERIVFL ++D A+ +I+QLL L+++DP KDI ++NSPGG ++A M +YD +Q ++ DVST+ +G++AS SL+L GG KGKR+++P+++IMIHQP+GG GQ D+EI A+ I+ KD ++++ TG+ E + KD DRD +M EA YG+ID VI+ R++II Sbjct: 22 DIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAII 200
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_FRATH (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. holarctica (strain LVS) GN=clpP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.386e-46 Identity = 86/179 (48.04%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-RDSII 793 D LLKERIVFL ++D A+ +I+QLL L+++DP KDI ++NSPGG ++A M +YD +Q ++ DVST+ +G++AS SL+L GG KGKR+++P+++IMIHQP+GG GQ D+EI A+ I+ KD ++++ TG+ E + KD DRD +M EA YG+ID VI+ R++II Sbjct: 22 DIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAII 200
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_FRATF (ATP-dependent Clp protease proteolytic subunit OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=clpP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.386e-46 Identity = 86/179 (48.04%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-RDSII 793 D LLKERIVFL ++D A+ +I+QLL L+++DP KDI ++NSPGG ++A M +YD +Q ++ DVST+ +G++AS SL+L GG KGKR+++P+++IMIHQP+GG GQ D+EI A+ I+ KD ++++ TG+ E + KD DRD +M EA YG+ID VI+ R++II Sbjct: 22 DIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAII 200 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |