FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.770e-49 Identity = 98/200 (49.00%), Postives = 137/200 (68.50%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEK 817 P RG A D LLK+RIVF+G+ IDD A+ +I+QLL L+++DP KDI ++NSPGG +SA MAIYD +Q +++D++TV +G +AS + +L G KGKRF++PN+RIMIHQPMGGA GQ D+ IQA+EI+ KD +I++ TG+ EQ+Q D DRD +MS EA YGI+D VI S + + P++ Sbjct: 5 PMVIEQTSRGERAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYGIVDHVITDRSDLDKLEKPQE 204
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_THELT (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=clpP PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.618e-49 Identity = 91/173 (52.60%), Postives = 133/173 (76.88%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 778 D LLK+RIVFLG IDD VA+ +++QLL L+A+DP KDI+L++NSPGGS++A +AIYD +Q +++DV T+ +G +AS A+++L GTKGKRFA+PN RIM+HQP+GGA G V DVEI +E++ K+ I+S TG+ ++++KD DRD +MS EA++YG++D VI+ Sbjct: 23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIYDTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDVEIITKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMSAYEALDYGLVDKVIE 195
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_ANOFW (ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.618e-49 Identity = 94/180 (52.22%), Postives = 131/180 (72.78%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ IMIHQP+GG GQ ++EI A+ I+ +D RI+S TG+ E +++D DRD +M+ +A EYG+ID V+ R Sbjct: 13 RGERAYDIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYGLIDRVLTR 192
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.618e-49 Identity = 91/188 (48.40%), Postives = 137/188 (72.87%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 P + RG A D LL++RI+FLG +DD +A+ I++Q+L L+++DP KDI L++NSPGGS+ A MAIYD +Q ++ DVST+ +G++AS + +L GGTKGKR A+P+ RIMIHQP+GGA G D+EIQA+EI+ K++ +++ TG+ E++++D DRD +M+P +A EYG+ID VI + Sbjct: 3 PTVIEQSARGERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVISK 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_ALHEH (ATP-dependent Clp protease proteolytic subunit OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=clpP PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.725e-49 Identity = 92/192 (47.92%), Postives = 138/192 (71.88%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI-DRDSI 790 P + RG A D LLKER++FL ++D +A+ I++QLL L++++P KDI +++NSPGG+++A +AIYD +Q ++ DVSTV +G +AS +L+L GGTKGKR+A+PN+R+MIHQP+GG GQ DV+I AREI+ +D RI++ TG+ E + +D DRD +MSP A EYG++D V+ DR ++ Sbjct: 20 PMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPDKDIHIYINSPGGAVTAGLAIYDTMQFIKPDVSTVCIGQAASMGALLLTGGTKGKRYALPNSRMMIHQPLGGFQGQATDVDIHAREILDMRDRLNRIMAHHTGQDMETIARDTDRDNFMSPDTACEYGLVDAVLADRKAL 211
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_RALEJ (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia eutropha (strain JMP134) GN=clpP PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.171e-49 Identity = 99/207 (47.83%), Postives = 139/207 (67.15%), Query Frame = 2 Query: 170 LALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 787 LA Q L P + RG A D LLKER+VFL ++D A+ +++QLL L++++P KDI L++NSPGGS+SA +AIYD +Q V+ DV T+ +GM+AS + +L G KGKR A+PN+RIMIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+ E++ +D DRD +MS +AV+YG+ID VI R S Sbjct: 10 LATTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVIARRS 216
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_LISMO (ATP-dependent Clp protease proteolytic subunit OS=Listeria monocytogenes GN=clpP PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.059e-49 Identity = 96/178 (53.93%), Postives = 128/178 (71.91%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+SA MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN IMIHQP+GGA GQ ++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_LISMF (ATP-dependent Clp protease proteolytic subunit OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpP PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.059e-49 Identity = 96/178 (53.93%), Postives = 128/178 (71.91%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+SA MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN IMIHQP+GGA GQ ++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_LISIN (ATP-dependent Clp protease proteolytic subunit OS=Listeria innocua GN=clpP PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.059e-49 Identity = 96/178 (53.93%), Postives = 128/178 (71.91%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+SA MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN IMIHQP+GGA GQ ++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSW (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus sp. (strain WCH70) GN=clpP PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.059e-49 Identity = 94/180 (52.22%), Postives = 132/180 (73.33%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++A +AIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ IMIHQP+GGA GQ ++EI A+ I+ +D RI++ TG+ E +++D DRD +M+ +A EYGIID V+ R Sbjct: 13 RGERAYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILAENTGQPVEVIERDTDRDNFMTAQKAQEYGIIDRVLTR 192 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |